RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 BEGAINQ9BUH8 593 aa19.43■□□□□ 0.7
CDK5RAP3-226ENST00000583182 GLIS2Q9BZE0 524 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-226ENST00000583182 DUOX1Q9NRD9 1551 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 RAD17O75943 681 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 CELF2O95319 508 aaKnown RBP19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 HIRAP54198 1017 aaPredicted RBP19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 HSP90AB3PQ58FF7 597 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 CIAPIN1Q6FI81 312 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 XAGE3Q8WTP9 111 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 TSKSQ9UJT2 592 aa19.42■□□□□ 0.7
CDK5RAP3-226ENST00000583182 MAP2K2P36507 400 aa19.41■□□□□ 0.7
CDK5RAP3-226ENST00000583182 TCIRG1Q13488 830 aa19.41■□□□□ 0.7
CDK5RAP3-226ENST00000583182 CDHR2Q9BYE9 1310 aa19.41■□□□□ 0.7
CDK5RAP3-226ENST00000583182 LRRC37AA6NMS7 1700 aa19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 SHTN1A0MZ66 631 aa19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 YDJCA8MPS7 323 aa19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 TMPOP42166 694 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 GRAPQ13588 217 aa19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 DDX46Q7L014 1031 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 GRAPLQ8TC17 118 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 TRPM4Q8TD43 1214 aa19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 BCL2L13Q9BXK5 485 aa19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 TRMT112Q9UI30 125 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-226ENST00000583182 DDX60Q8IY21 1712 aaKnown RBP19.39■□□□□ 0.7
CDK5RAP3-226ENST00000583182 KRT24Q2M2I5 525 aa19.39■□□□□ 0.69
CDK5RAP3-226ENST00000583182 FAM161AQ3B820 660 aa19.39■□□□□ 0.69
CDK5RAP3-226ENST00000583182 SH3TC1Q8TE82 1336 aa19.39■□□□□ 0.69
CDK5RAP3-226ENST00000583182 TNIP1Q15025 636 aa19.38■□□□□ 0.69
CDK5RAP3-226ENST00000583182 ZC3H15Q8WU90 426 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-226ENST00000583182 ZNF408Q9H9D4 720 aa19.38■□□□□ 0.69
CDK5RAP3-226ENST00000583182 CASP8AP2Q9UKL3 1982 aa19.37■□□□□ 0.69
CDK5RAP3-226ENST00000583182 HHIPL1Q96JK4 782 aa19.37■□□□□ 0.69
CDK5RAP3-226ENST00000583182 CNOT7Q9UIV1 285 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-226ENST00000583182 COL4A1P02462 1669 aa19.36■□□□□ 0.69
CDK5RAP3-226ENST00000583182 CCDC85CA6NKD9 419 aa19.36■□□□□ 0.69
CDK5RAP3-226ENST00000583182 LMOD3Q0VAK6 560 aa19.36■□□□□ 0.69
CDK5RAP3-226ENST00000583182 CDC37L1Q7L3B6 337 aa19.36■□□□□ 0.69
CDK5RAP3-226ENST00000583182 DLK2Q6UY11 383 aa19.35■□□□□ 0.69
CDK5RAP3-226ENST00000583182 MICALL2Q8IY33 904 aa19.35■□□□□ 0.69
CDK5RAP3-226ENST00000583182 CHPF2Q9P2E5 772 aa19.35■□□□□ 0.69
CDK5RAP3-226ENST00000583182 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-226ENST00000583182 POLR2AP24928 1970 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-226ENST00000583182 CHL1O00533 1208 aa19.34■□□□□ 0.69
CDK5RAP3-226ENST00000583182 BRPF1P55201 1214 aaPredicted RBP19.34■□□□□ 0.69
CDK5RAP3-226ENST00000583182 TMC4Q7Z404 712 aa19.34■□□□□ 0.69
CDK5RAP3-226ENST00000583182 CELF1Q92879 486 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP3-226ENST00000583182 H7C1D1 291 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 CA12O43570 354 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 NEUROD2Q15784 382 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 SAMD7Q7Z3H4 446 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 USP48Q86UV5 1035 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 ZIC5Q96T25 663 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 ISCA1Q9BUE6 129 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 DBNDD1Q9H9R9 158 aa19.33■□□□□ 0.68
CDK5RAP3-226ENST00000583182 PSMD14O00487 310 aa19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 SF3B3Q15393 1217 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 WASHC4Q2M389 1173 aa19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 CCDC146Q8IYE0 955 aa19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 PLBD2Q8NHP8 589 aa19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 DPF2Q92785 391 aa19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-226ENST00000583182 ATP5J2-PTCD1G3V325 749 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 RIMBP2O15034 1052 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 EGFRP00533 1210 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 RGS19P49795 217 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 ANKRD13DQ6ZTN6 518 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 MCOLN1Q9GZU1 580 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 POLLQ9UGP5 575 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 TRIM35Q9UPQ4 493 aa19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 LAS1LQ9Y4W2 734 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-226ENST00000583182 HUNKP57058 714 aa19.3■□□□□ 0.68
CDK5RAP3-226ENST00000583182 GPSM2P81274 684 aa19.3■□□□□ 0.68
CDK5RAP3-226ENST00000583182 RALBP1Q15311 655 aa19.3■□□□□ 0.68
CDK5RAP3-226ENST00000583182 TBC1D10BQ4KMP7 808 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-226ENST00000583182 KCNQ5Q9NR82 932 aa19.3■□□□□ 0.68
CDK5RAP3-226ENST00000583182 C6orf229H3BNL8 230 aa19.29■□□□□ 0.68
CDK5RAP3-226ENST00000583182 MLLT1Q03111 559 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-226ENST00000583182 NOGQ13253 232 aa19.29■□□□□ 0.68
CDK5RAP3-226ENST00000583182 RTL5Q5HYW3 569 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-226ENST00000583182 SCN9AQ15858 1988 aa19.29■□□□□ 0.68
CDK5RAP3-226ENST00000583182 RTL9Q8NET4 1388 aa19.29■□□□□ 0.68
CDK5RAP3-226ENST00000583182 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
CDK5RAP3-226ENST00000583182 DBF4Q9UBU7 674 aaPredicted RBP19.28■□□□□ 0.68
CDK5RAP3-226ENST00000583182 ADM5C9JUS6 153 aa19.27■□□□□ 0.68
CDK5RAP3-226ENST00000583182 ECE2O60344 883 aa19.27■□□□□ 0.68
CDK5RAP3-226ENST00000583182 HOXB7P09629 217 aa19.27■□□□□ 0.68
CDK5RAP3-226ENST00000583182 KRT26Q7Z3Y9 468 aa19.27■□□□□ 0.68
CDK5RAP3-226ENST00000583182 FAM155AB1AL88 458 aaPredicted RBP19.26■□□□□ 0.67
CDK5RAP3-226ENST00000583182 SLC34A2O95436 690 aa19.26■□□□□ 0.67
CDK5RAP3-226ENST00000583182 RPS12P25398 132 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-226ENST00000583182 RBM26Q5T8P6 1007 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-226ENST00000583182 TBC1D16Q8TBP0 767 aa19.26■□□□□ 0.67
CDK5RAP3-226ENST00000583182 GBA2Q9HCG7 927 aaPredicted RBP19.26■□□□□ 0.67
CDK5RAP3-226ENST00000583182 IRS4O14654 1257 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms