RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PIP4K2AP48426 406 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 HIRAP54198 1017 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 AOC3Q16853 763 aa11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 PLEKHF1Q96S99 279 aa11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 TMX4Q9H1E5 349 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 BTBD11A6QL63 1104 aa11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 SLC10A3P09131 477 aa11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 ZNF157P51786 506 aaPredicted RBP11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 C2orf69Q8N8R5 385 aa11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 SUPT20HQ8NEM7 779 aa11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 TRPM4Q8TD43 1214 aa11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 RBM17Q96I25 401 aaKnown RBP11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 GBA2Q9HCG7 927 aaPredicted RBP11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 LRRC37AA6NMS7 1700 aa11.35□□□□□ -0.59
PDLIM1P3-201ENST00000582370 TNIP1Q15025 636 aa11.34□□□□□ -0.59
PDLIM1P3-201ENST00000582370 USP48Q86UV5 1035 aa11.34□□□□□ -0.59
PDLIM1P3-201ENST00000582370 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
PDLIM1P3-201ENST00000582370 DLG5Q8TDM6 1919 aa11.34□□□□□ -0.59
PDLIM1P3-201ENST00000582370 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
PDLIM1P3-201ENST00000582370 PAPPA2Q9BXP8 1791 aa11.33□□□□□ -0.59
PDLIM1P3-201ENST00000582370 H7C1D1 291 aa11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 NFE2L2Q16236 605 aa11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 HLFQ16534 295 aa11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 CSRNP1Q96S65 589 aa11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 RTFDC1Q9BY42 306 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 CNOT7Q9UIV1 285 aaKnown RBP11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
PDLIM1P3-201ENST00000582370 BRCA2P51587 3418 aa11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 KCNQ3O43525 872 aa11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 KIAA2012Q0VF49 1180 aa11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 RTF1Q92541 710 aaKnown RBP11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 DUOX1Q9NRD9 1551 aa11.32□□□□□ -0.6
PDLIM1P3-201ENST00000582370 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 ERVV-1B6SEH8 477 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 TCERG1O14776 1098 aaKnown RBP11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 FBXO46Q6PJ61 603 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 WDR63Q8IWG1 891 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 DPF2Q92785 391 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 SZT2Q5T011 3432 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 CENPFP49454 3210 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 IL16Q14005 1332 aa11.31□□□□□ -0.6
PDLIM1P3-201ENST00000582370 PSME4Q14997 1843 aa11.3□□□□□ -0.6
PDLIM1P3-201ENST00000582370 APAF1O14727 1248 aa11.3□□□□□ -0.6
PDLIM1P3-201ENST00000582370 RAD17O75943 681 aa11.3□□□□□ -0.6
PDLIM1P3-201ENST00000582370 RIPK4P57078 832 aa11.3□□□□□ -0.6
PDLIM1P3-201ENST00000582370 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1P3-201ENST00000582370 CHMP4AQ9BY43 222 aa11.3□□□□□ -0.6
PDLIM1P3-201ENST00000582370 HTTP42858 3142 aa11.3□□□□□ -0.6
PDLIM1P3-201ENST00000582370 TAF1P21675 1872 aa11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 LAMB1P07942 1786 aa11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 DPP8Q6V1X1 898 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 DCPSQ96C86 337 aaKnown RBP11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 ABCC4O15439 1325 aa11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 UBN2Q6ZU65 1347 aa11.29□□□□□ -0.6
PDLIM1P3-201ENST00000582370 SHTN1A0MZ66 631 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 ADM5C9JUS6 153 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 NTSR2O95665 410 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 DLK2Q6UY11 383 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 SAMD7Q7Z3H4 446 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 MPNDQ8N594 471 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
PDLIM1P3-201ENST00000582370 YDJCA8MPS7 323 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 FKBP1BP68106 108 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 TBC1D10BQ4KMP7 808 aaPredicted RBP11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 SUSD4Q5VX71 490 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 KIF6Q6ZMV9 814 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 SP8Q8IXZ3 490 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 KIAA0100Q14667 2235 aaKnown RBP11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
PDLIM1P3-201ENST00000582370 E9PSI1 815 aa11.26□□□□□ -0.61
PDLIM1P3-201ENST00000582370 BBOX1O75936 387 aa11.26□□□□□ -0.61
PDLIM1P3-201ENST00000582370 CENPBP07199 599 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1P3-201ENST00000582370 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
PDLIM1P3-201ENST00000582370 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
PDLIM1P3-201ENST00000582370 PPP1R42Q7Z4L9 355 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms