RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ZNF219Q9P2Y4 722 aaPredicted RBP20.79■□□□□ 0.92
RNF43-206ENST00000582293 ALDH1B1P30837 517 aa20.78■□□□□ 0.92
RNF43-206ENST00000582293 EPHA10Q5JZY3 1008 aa20.78■□□□□ 0.92
RNF43-206ENST00000582293 TTLL11Q8NHH1 800 aa20.78■□□□□ 0.92
RNF43-206ENST00000582293 USP44Q9H0E7 712 aa20.78■□□□□ 0.92
RNF43-206ENST00000582293 FER1L6Q2WGJ9 1857 aa20.77■□□□□ 0.92
RNF43-206ENST00000582293 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
RNF43-206ENST00000582293 PRELPP51888 382 aa20.77■□□□□ 0.92
RNF43-206ENST00000582293 CTSWP56202 376 aa20.77■□□□□ 0.92
RNF43-206ENST00000582293 FOXO4P98177 505 aa20.77■□□□□ 0.92
RNF43-206ENST00000582293 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
RNF43-206ENST00000582293 CCDC85AQ96PX6 553 aaPredicted RBP20.77■□□□□ 0.92
RNF43-206ENST00000582293 SEC31BQ9NQW1 1179 aa20.77■□□□□ 0.92
RNF43-206ENST00000582293 RCAN3Q9UKA8 241 aa20.77■□□□□ 0.92
RNF43-206ENST00000582293 NFKBIEO00221 500 aa20.76■□□□□ 0.91
RNF43-206ENST00000582293 IPO8O15397 1037 aaKnown RBP20.76■□□□□ 0.91
RNF43-206ENST00000582293 CSF1RP07333 972 aa20.76■□□□□ 0.91
RNF43-206ENST00000582293 CCT4P50991 539 aaKnown RBP20.76■□□□□ 0.91
RNF43-206ENST00000582293 GRAPQ13588 217 aa20.76■□□□□ 0.91
RNF43-206ENST00000582293 ZKSCAN2Q63HK3 967 aa20.76■□□□□ 0.91
RNF43-206ENST00000582293 INTS3Q68E01 1043 aaKnown RBP20.76■□□□□ 0.91
RNF43-206ENST00000582293 GRAPLQ8TC17 118 aaPredicted RBP20.76■□□□□ 0.91
RNF43-206ENST00000582293 SUCLG2Q96I99 432 aa20.76■□□□□ 0.91
RNF43-206ENST00000582293 RLBP1P12271 317 aa20.75■□□□□ 0.91
RNF43-206ENST00000582293 ARHGAP27Q6ZUM4 889 aa20.75■□□□□ 0.91
RNF43-206ENST00000582293 DDX46Q7L014 1031 aaKnown RBP20.75■□□□□ 0.91
RNF43-206ENST00000582293 CLUAP1Q96AJ1 413 aa20.75■□□□□ 0.91
RNF43-206ENST00000582293 GREM2Q9H772 168 aa20.75■□□□□ 0.91
RNF43-206ENST00000582293 C9orf78Q9NZ63 289 aaPredicted RBP20.75■□□□□ 0.91
RNF43-206ENST00000582293 LRRC37AA6NMS7 1700 aa20.75■□□□□ 0.91
RNF43-206ENST00000582293 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
RNF43-206ENST00000582293 PPEF1O14829 653 aaPredicted RBP20.74■□□□□ 0.91
RNF43-206ENST00000582293 HSP90B1P14625 803 aaKnown RBP20.74■□□□□ 0.91
RNF43-206ENST00000582293 RASSF7Q02833 373 aa20.74■□□□□ 0.91
RNF43-206ENST00000582293 CHD4Q14839 1912 aa20.73■□□□□ 0.91
RNF43-206ENST00000582293 CCDC152Q4G0S7 254 aa20.73■□□□□ 0.91
RNF43-206ENST00000582293 SBF1O95248 1867 aa20.73■□□□□ 0.91
RNF43-206ENST00000582293 BBOX1O75936 387 aa20.72■□□□□ 0.91
RNF43-206ENST00000582293 TMEM57Q8N5G2 664 aa20.72■□□□□ 0.91
RNF43-206ENST00000582293 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
RNF43-206ENST00000582293 FAM161AQ3B820 660 aa20.71■□□□□ 0.91
RNF43-206ENST00000582293 ANKRD44Q8N8A2 993 aa20.71■□□□□ 0.91
RNF43-206ENST00000582293 MEIS3Q99687 375 aa20.71■□□□□ 0.91
RNF43-206ENST00000582293 LTBP1Q14766 1721 aa20.7■□□□□ 0.9
RNF43-206ENST00000582293 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
RNF43-206ENST00000582293 LMBR1LQ6UX01 489 aa20.7■□□□□ 0.9
RNF43-206ENST00000582293 DUOX1Q9NRD9 1551 aa20.7■□□□□ 0.9
RNF43-206ENST00000582293 PLIN1O60240 522 aa20.69■□□□□ 0.9
RNF43-206ENST00000582293 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
RNF43-206ENST00000582293 RABL6Q3YEC7 729 aaPredicted RBP20.69■□□□□ 0.9
RNF43-206ENST00000582293 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
RNF43-206ENST00000582293 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
RNF43-206ENST00000582293 DZIP1LQ8IYY4 767 aaKnown RBP20.69■□□□□ 0.9
RNF43-206ENST00000582293 BICC1Q9H694 974 aaKnown RBP20.69■□□□□ 0.9
RNF43-206ENST00000582293 LTBP3Q9NS15 1303 aa20.69■□□□□ 0.9
RNF43-206ENST00000582293 SPEF2Q9C093 1822 aa20.69■□□□□ 0.9
RNF43-206ENST00000582293 ITGA6P23229 1130 aa20.68■□□□□ 0.9
RNF43-206ENST00000582293 CC2D2BQ6DHV5 1058 aa20.67■□□□□ 0.9
RNF43-206ENST00000582293 PANK1Q8TE04 598 aa20.67■□□□□ 0.9
RNF43-206ENST00000582293 CCDC88AQ3V6T2 1871 aa20.67■□□□□ 0.9
RNF43-206ENST00000582293 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
RNF43-206ENST00000582293 RTKN2Q8IZC4 609 aa20.66■□□□□ 0.9
RNF43-206ENST00000582293 TAOK3Q9H2K8 898 aa20.66■□□□□ 0.9
RNF43-206ENST00000582293 COL4A5P29400 1685 aa20.66■□□□□ 0.9
RNF43-206ENST00000582293 C9orf131Q5VYM1 1079 aa20.65■□□□□ 0.9
RNF43-206ENST00000582293 TMC4Q7Z404 712 aa20.65■□□□□ 0.9
RNF43-206ENST00000582293 ANKRD18AQ8IVF6 992 aa20.65■□□□□ 0.9
RNF43-206ENST00000582293 UBTFL1P0CB47 393 aaPredicted RBP20.64■□□□□ 0.89
RNF43-206ENST00000582293 GPSM2P81274 684 aa20.64■□□□□ 0.89
RNF43-206ENST00000582293 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
RNF43-206ENST00000582293 CDC5LQ99459 802 aaKnown RBP20.64■□□□□ 0.89
RNF43-206ENST00000582293 PSMD1Q99460 953 aa20.64■□□□□ 0.89
RNF43-206ENST00000582293 RTFDC1Q9BY42 306 aaPredicted RBP20.64■□□□□ 0.89
RNF43-206ENST00000582293 DICER1Q9UPY3 1922 aaKnown RBP20.63■□□□□ 0.89
RNF43-206ENST00000582293 LMNB1P20700 586 aa20.63■□□□□ 0.89
RNF43-206ENST00000582293 FTSJ3Q8IY81 847 aaKnown RBP20.63■□□□□ 0.89
RNF43-206ENST00000582293 ZNF594Q96JF6 807 aaPredicted RBP20.63■□□□□ 0.89
RNF43-206ENST00000582293 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
RNF43-206ENST00000582293 CHMP3Q9Y3E7 222 aa20.63■□□□□ 0.89
RNF43-206ENST00000582293 LRRFIP2Q9Y608 721 aaKnown RBP20.63■□□□□ 0.89
RNF43-206ENST00000582293 A0A1B0GUL6 1792 aa20.62■□□□□ 0.89
RNF43-206ENST00000582293 TIAM2Q8IVF5 1701 aa20.62■□□□□ 0.89
RNF43-206ENST00000582293 ANKRD18BA2A2Z9 1011 aa20.62■□□□□ 0.89
RNF43-206ENST00000582293 ZBTB7BO15156 539 aaPredicted RBP20.62■□□□□ 0.89
RNF43-206ENST00000582293 IFIT5Q13325 482 aaKnown RBP20.62■□□□□ 0.89
RNF43-206ENST00000582293 BSDC1Q9NW68 430 aaPredicted RBP20.62■□□□□ 0.89
RNF43-206ENST00000582293 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
RNF43-206ENST00000582293 WTIPA6NIX2 430 aaPredicted RBP20.61■□□□□ 0.89
RNF43-206ENST00000582293 RFX5P48382 616 aaPredicted RBP20.61■□□□□ 0.89
RNF43-206ENST00000582293 GRIPAP1Q4V328 841 aa20.61■□□□□ 0.89
RNF43-206ENST00000582293 ITPRIPQ8IWB1 547 aa20.61■□□□□ 0.89
RNF43-206ENST00000582293 MPNDQ8N594 471 aa20.61■□□□□ 0.89
RNF43-206ENST00000582293 MINPP1Q9UNW1 487 aa20.61■□□□□ 0.89
RNF43-206ENST00000582293 GNAI3P08754 354 aa20.6■□□□□ 0.89
RNF43-206ENST00000582293 YY1P25490 414 aa20.6■□□□□ 0.89
RNF43-206ENST00000582293 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
RNF43-206ENST00000582293 PODXL2Q9NZ53 605 aa20.6■□□□□ 0.89
RNF43-206ENST00000582293 POLLQ9UGP5 575 aa20.6■□□□□ 0.89
RNF43-206ENST00000582293 IGHMBP2P38935 993 aaKnown RBP20.59■□□□□ 0.89
RNF43-206ENST00000582293 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms