RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
PPP4R1-220ENST00000581835 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
PPP4R1-220ENST00000581835 PDE8AO60658 829 aa13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 TMX4Q9H1E5 349 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
PPP4R1-220ENST00000581835 COL4A1P02462 1669 aa13.1□□□□□ -0.31
PPP4R1-220ENST00000581835 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-220ENST00000581835 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
PPP4R1-220ENST00000581835 CELF1Q92879 486 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-220ENST00000581835 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
PPP4R1-220ENST00000581835 LRRC37AA6NMS7 1700 aa13.09□□□□□ -0.31
PPP4R1-220ENST00000581835 POTECB2RU33 542 aa13.09□□□□□ -0.31
PPP4R1-220ENST00000581835 F6X3S4 739 aa13.09□□□□□ -0.31
PPP4R1-220ENST00000581835 H7C1W4 665 aa13.09□□□□□ -0.31
PPP4R1-220ENST00000581835 GCKRQ14397 625 aa13.09□□□□□ -0.31
PPP4R1-220ENST00000581835 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
PPP4R1-220ENST00000581835 FZD9O00144 591 aa13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 TOMM70O94826 608 aa13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 CCDC152Q4G0S7 254 aa13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 MPNDQ8N594 471 aa13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 RTFDC1Q9BY42 306 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 SEC31BQ9NQW1 1179 aa13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 COL4A5P29400 1685 aa13.08□□□□□ -0.32
PPP4R1-220ENST00000581835 VEGFAP15692 232 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 JDP2Q8WYK2 163 aa13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-220ENST00000581835 CASP7P55210 303 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 CTSWP56202 376 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 SUPT20HQ8NEM7 779 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 TTLL11Q8NHH1 800 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 SSH1Q8WYL5 1049 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 DUOX1Q9NRD9 1551 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 SCN4AP35499 1836 aa13.06□□□□□ -0.32
PPP4R1-220ENST00000581835 CEP350Q5VT06 3117 aa13.05□□□□□ -0.32
PPP4R1-220ENST00000581835 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
PPP4R1-220ENST00000581835 AOC3Q16853 763 aa13.05□□□□□ -0.32
PPP4R1-220ENST00000581835 PLA2G12BQ9BX93 195 aa13.05□□□□□ -0.32
PPP4R1-220ENST00000581835 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
PPP4R1-220ENST00000581835 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 GPSM2P81274 684 aa13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 KIAA2012Q0VF49 1180 aa13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 SLC4A10Q6U841 1118 aa13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 GREM2Q9H772 168 aa13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 NSFL1CQ9UNZ2 370 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-220ENST00000581835 ALDH1L1O75891 902 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 CSF1RP07333 972 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 CT47B1P0C2W7 299 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 EIF6P56537 245 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 GPC2Q8N158 579 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 PTPRCP08575 1304 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
PPP4R1-220ENST00000581835 HSPA6P17066 643 aa13.02□□□□□ -0.33
PPP4R1-220ENST00000581835 PODXL2Q9NZ53 605 aa13.02□□□□□ -0.33
PPP4R1-220ENST00000581835 POLLQ9UGP5 575 aa13.02□□□□□ -0.33
PPP4R1-220ENST00000581835 IQCA1LA6NCM1 817 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 GRM8O00222 908 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 ITGA6P23229 1130 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 FOXO4P98177 505 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 FSTL1Q12841 308 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 BSDC1Q9NW68 430 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 ZNRF3Q9ULT6 936 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
PPP4R1-220ENST00000581835 FAM161AQ3B820 660 aa13□□□□□ -0.33
PPP4R1-220ENST00000581835 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
PPP4R1-220ENST00000581835 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
PPP4R1-220ENST00000581835 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
PPP4R1-220ENST00000581835 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
PPP4R1-220ENST00000581835 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
PPP4R1-220ENST00000581835 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
PPP4R1-220ENST00000581835 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
PPP4R1-220ENST00000581835 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
PPP4R1-220ENST00000581835 IGHMBP2P38935 993 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms