RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 CHPF2Q9P2E5 772 aa19.4■□□□□ 0.7
SCN4A-202ENST00000581514 GRAPQ13588 217 aa19.39■□□□□ 0.69
SCN4A-202ENST00000581514 GRAPLQ8TC17 118 aaPredicted RBP19.39■□□□□ 0.69
SCN4A-202ENST00000581514 ADARB2Q9NS39 739 aaKnown RBP19.39■□□□□ 0.69
SCN4A-202ENST00000581514 WDR33Q9C0J8 1336 aaKnown RBP19.39■□□□□ 0.69
SCN4A-202ENST00000581514 KIAA2012Q0VF49 1180 aa19.38■□□□□ 0.69
SCN4A-202ENST00000581514 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
SCN4A-202ENST00000581514 HDGFL1Q5TGJ6 251 aa19.38■□□□□ 0.69
SCN4A-202ENST00000581514 DDX60Q8IY21 1712 aaKnown RBP19.38■□□□□ 0.69
SCN4A-202ENST00000581514 TRAF5O00463 557 aa19.37■□□□□ 0.69
SCN4A-202ENST00000581514 HOXB7P09629 217 aa19.37■□□□□ 0.69
SCN4A-202ENST00000581514 GMPSP49915 693 aaPredicted RBP19.37■□□□□ 0.69
SCN4A-202ENST00000581514 PLBD2Q8NHP8 589 aa19.37■□□□□ 0.69
SCN4A-202ENST00000581514 LRRC37AA6NMS7 1700 aa19.37■□□□□ 0.69
SCN4A-202ENST00000581514 LBX1P52954 281 aa19.36■□□□□ 0.69
SCN4A-202ENST00000581514 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
SCN4A-202ENST00000581514 CST9Q5W186 159 aa19.36■□□□□ 0.69
SCN4A-202ENST00000581514 CIAPIN1Q6FI81 312 aa19.36■□□□□ 0.69
SCN4A-202ENST00000581514 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
SCN4A-202ENST00000581514 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
SCN4A-202ENST00000581514 DUOX1Q9NRD9 1551 aa19.36■□□□□ 0.69
SCN4A-202ENST00000581514 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
SCN4A-202ENST00000581514 TMC4Q7Z404 712 aa19.35■□□□□ 0.69
SCN4A-202ENST00000581514 ISCA1Q9BUE6 129 aa19.35■□□□□ 0.69
SCN4A-202ENST00000581514 DBF4Q9UBU7 674 aaPredicted RBP19.35■□□□□ 0.69
SCN4A-202ENST00000581514 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
SCN4A-202ENST00000581514 CDHR2Q9BYE9 1310 aa19.34■□□□□ 0.69
SCN4A-202ENST00000581514 RAD17O75943 681 aa19.34■□□□□ 0.69
SCN4A-202ENST00000581514 HSPA8P11142 646 aaKnown RBP19.34■□□□□ 0.69
SCN4A-202ENST00000581514 TNIP1Q15025 636 aa19.34■□□□□ 0.69
SCN4A-202ENST00000581514 CAPNS2Q96L46 248 aa19.34■□□□□ 0.69
SCN4A-202ENST00000581514 ATP5J2-PTCD1G3V325 749 aa19.33■□□□□ 0.68
SCN4A-202ENST00000581514 ECE1P42892 770 aa19.33■□□□□ 0.68
SCN4A-202ENST00000581514 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.68
SCN4A-202ENST00000581514 FAM89AQ96GI7 184 aa19.33■□□□□ 0.68
SCN4A-202ENST00000581514 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
SCN4A-202ENST00000581514 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
SCN4A-202ENST00000581514 TLL2Q9Y6L7 1015 aa19.33■□□□□ 0.68
SCN4A-202ENST00000581514 YDJCA8MPS7 323 aa19.32■□□□□ 0.68
SCN4A-202ENST00000581514 SF3B3Q15393 1217 aaKnown RBP19.32■□□□□ 0.68
SCN4A-202ENST00000581514 DUSP27Q5VZP5 1158 aa19.32■□□□□ 0.68
SCN4A-202ENST00000581514 CYP4F22Q6NT55 531 aa19.32■□□□□ 0.68
SCN4A-202ENST00000581514 HYPKQ9NX55 129 aa19.32■□□□□ 0.68
SCN4A-202ENST00000581514 PGAP2Q9UHJ9 254 aa19.32■□□□□ 0.68
SCN4A-202ENST00000581514 CELF1Q92879 486 aaKnown RBP19.31■□□□□ 0.68
SCN4A-202ENST00000581514 GLIS2Q9BZE0 524 aaPredicted RBP19.31■□□□□ 0.68
SCN4A-202ENST00000581514 CELF2O95319 508 aaKnown RBP19.3■□□□□ 0.68
SCN4A-202ENST00000581514 HIRAP54198 1017 aaPredicted RBP19.3■□□□□ 0.68
SCN4A-202ENST00000581514 GRM1Q13255 1194 aa19.3■□□□□ 0.68
SCN4A-202ENST00000581514 TRPM4Q8TD43 1214 aa19.3■□□□□ 0.68
SCN4A-202ENST00000581514 ZC3H15Q8WU90 426 aaKnown RBP19.3■□□□□ 0.68
SCN4A-202ENST00000581514 GPR101Q96P66 508 aaPredicted RBP19.3■□□□□ 0.68
SCN4A-202ENST00000581514 MBIPQ9NS73 344 aa19.3■□□□□ 0.68
SCN4A-202ENST00000581514 COL4A1P02462 1669 aa19.3■□□□□ 0.68
SCN4A-202ENST00000581514 TRIM28Q13263 835 aaKnown RBP19.29■□□□□ 0.68
SCN4A-202ENST00000581514 WASHC4Q2M389 1173 aa19.29■□□□□ 0.68
SCN4A-202ENST00000581514 RTL5Q5HYW3 569 aaPredicted RBP19.29■□□□□ 0.68
SCN4A-202ENST00000581514 CNOT7Q9UIV1 285 aaKnown RBP19.29■□□□□ 0.68
SCN4A-202ENST00000581514 NSFL1CQ9UNZ2 370 aaKnown RBP19.29■□□□□ 0.68
SCN4A-202ENST00000581514 SHTN1A0MZ66 631 aa19.28■□□□□ 0.68
SCN4A-202ENST00000581514 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
SCN4A-202ENST00000581514 SAPCD2Q86UD0 394 aa19.28■□□□□ 0.68
SCN4A-202ENST00000581514 H7C1D1 291 aa19.27■□□□□ 0.68
SCN4A-202ENST00000581514 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
SCN4A-202ENST00000581514 GPSM2P81274 684 aa19.27■□□□□ 0.68
SCN4A-202ENST00000581514 MICALL2Q8IY33 904 aa19.27■□□□□ 0.68
SCN4A-202ENST00000581514 BEGAINQ9BUH8 593 aa19.27■□□□□ 0.68
SCN4A-202ENST00000581514 DBNDD1Q9H9R9 158 aa19.27■□□□□ 0.68
SCN4A-202ENST00000581514 POLLQ9UGP5 575 aa19.27■□□□□ 0.68
SCN4A-202ENST00000581514 ZBTB12Q9Y330 459 aaPredicted RBP19.27■□□□□ 0.68
SCN4A-202ENST00000581514 C6orf229H3BNL8 230 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 PSMD14O00487 310 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 AOC2O75106 756 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 MAP2K2P36507 400 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 CDC37L1Q7L3B6 337 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 DPF2Q92785 391 aa19.26■□□□□ 0.67
SCN4A-202ENST00000581514 PRKRIP1Q9H875 184 aaPredicted RBP19.26■□□□□ 0.67
SCN4A-202ENST00000581514 RPS8P62241 208 aaKnown RBP19.25■□□□□ 0.67
SCN4A-202ENST00000581514 GOLGA2Q08379 1002 aa19.25■□□□□ 0.67
SCN4A-202ENST00000581514 HHIPL1Q96JK4 782 aa19.25■□□□□ 0.67
SCN4A-202ENST00000581514 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
SCN4A-202ENST00000581514 ZNF408Q9H9D4 720 aa19.25■□□□□ 0.67
SCN4A-202ENST00000581514 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
SCN4A-202ENST00000581514 APAF1O14727 1248 aa19.24■□□□□ 0.67
SCN4A-202ENST00000581514 ZBTB38Q8NAP3 1195 aaPredicted RBP19.24■□□□□ 0.67
SCN4A-202ENST00000581514 EYA3Q99504 573 aa19.24■□□□□ 0.67
SCN4A-202ENST00000581514 POLR2AP24928 1970 aaKnown RBP19.24■□□□□ 0.67
SCN4A-202ENST00000581514 ELL2O00472 640 aaPredicted RBP19.23■□□□□ 0.67
SCN4A-202ENST00000581514 ECE2O60344 883 aa19.23■□□□□ 0.67
SCN4A-202ENST00000581514 GNAI1P63096 354 aa19.23■□□□□ 0.67
SCN4A-202ENST00000581514 CALD1Q05682 793 aaKnown RBP19.23■□□□□ 0.67
SCN4A-202ENST00000581514 SAMD7Q7Z3H4 446 aa19.23■□□□□ 0.67
SCN4A-202ENST00000581514 TBC1D16Q8TBP0 767 aa19.23■□□□□ 0.67
SCN4A-202ENST00000581514 HSP90B1P14625 803 aaKnown RBP19.22■□□□□ 0.67
SCN4A-202ENST00000581514 RPS12P25398 132 aaKnown RBP19.22■□□□□ 0.67
SCN4A-202ENST00000581514 DOK7Q18PE1 504 aa19.22■□□□□ 0.67
SCN4A-202ENST00000581514 TBC1D10BQ4KMP7 808 aaPredicted RBP19.22■□□□□ 0.67
SCN4A-202ENST00000581514 USP48Q86UV5 1035 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms