RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 ARSDP51689 593 aa8.46□□□□□ -1.06
TTC39C-207ENST00000581394 DPYDQ12882 1025 aa8.46□□□□□ -1.06
TTC39C-207ENST00000581394 CRTC2Q53ET0 693 aaPredicted RBP8.46□□□□□ -1.06
TTC39C-207ENST00000581394 ELMSAN1Q6PJG2 1045 aa8.46□□□□□ -1.06
TTC39C-207ENST00000581394 IFT43Q96FT9 208 aa8.46□□□□□ -1.06
TTC39C-207ENST00000581394 KLK14Q9P0G3 267 aa8.46□□□□□ -1.06
TTC39C-207ENST00000581394 RNF112Q9ULX5 631 aa8.46□□□□□ -1.06
TTC39C-207ENST00000581394 PLAURQ03405 335 aa8.45□□□□□ -1.06
TTC39C-207ENST00000581394 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
TTC39C-207ENST00000581394 FNBP4Q8N3X1 1017 aaPredicted RBP8.45□□□□□ -1.06
TTC39C-207ENST00000581394 FAM196BA6NMK8 535 aa8.44□□□□□ -1.06
TTC39C-207ENST00000581394 RARAP10276 462 aa8.44□□□□□ -1.06
TTC39C-207ENST00000581394 TARSP26639 723 aaKnown RBP8.44□□□□□ -1.06
TTC39C-207ENST00000581394 KRT25Q7Z3Z0 450 aa8.44□□□□□ -1.06
TTC39C-207ENST00000581394 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
TTC39C-207ENST00000581394 MEGF10Q96KG7 1140 aa8.44□□□□□ -1.06
TTC39C-207ENST00000581394 QTRT2Q9H974 415 aaKnown RBP8.44□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L15C9J2P7 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L10C9JJH3 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L13C9JLJ4 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L11C9JVI0 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L21D6R901 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L18D6R9N7 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 FOXO3O43524 673 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 MICAL2O94851 1124 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 ARID4AP29374 1257 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-207ENST00000581394 NRLP54845 237 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 USP17L24Q0WX57 530 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 DGKZQ13574 1117 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 MYO19Q96H55 970 aa8.43□□□□□ -1.06
TTC39C-207ENST00000581394 DLL1O00548 723 aa8.42□□□□□ -1.06
TTC39C-207ENST00000581394 DEAF1O75398 565 aaPredicted RBP8.42□□□□□ -1.06
TTC39C-207ENST00000581394 LGR5O75473 907 aa8.42□□□□□ -1.06
TTC39C-207ENST00000581394 SASH3O75995 380 aa8.42□□□□□ -1.06
TTC39C-207ENST00000581394 PRR23CQ6ZRP0 262 aa8.42□□□□□ -1.06
TTC39C-207ENST00000581394 PPP1R12CQ9BZL4 782 aa8.42□□□□□ -1.06
TTC39C-207ENST00000581394 EGFRP00533 1210 aa8.41□□□□□ -1.06
TTC39C-207ENST00000581394 WEE1P30291 646 aa8.41□□□□□ -1.06
TTC39C-207ENST00000581394 MLLT1Q03111 559 aaPredicted RBP8.41□□□□□ -1.06
TTC39C-207ENST00000581394 C11orf91Q3C1V1 193 aa8.41□□□□□ -1.06
TTC39C-207ENST00000581394 LCE3BQ5TA77 95 aa8.41□□□□□ -1.06
TTC39C-207ENST00000581394 PROSER2Q86WR7 435 aaPredicted RBP8.41□□□□□ -1.06
TTC39C-207ENST00000581394 SMG9Q9H0W8 520 aaKnown RBP8.41□□□□□ -1.06
TTC39C-207ENST00000581394 SLC51AQ86UW1 340 aa8.4□□□□□ -1.06
TTC39C-207ENST00000581394 DZIP1LQ8IYY4 767 aaKnown RBP8.4□□□□□ -1.06
TTC39C-207ENST00000581394 TLR7Q9NYK1 1049 aaKnown RBP8.4□□□□□ -1.06
TTC39C-207ENST00000581394 OPLAHO14841 1288 aa8.39□□□□□ -1.07
TTC39C-207ENST00000581394 TMEM130Q8N3G9 435 aa8.39□□□□□ -1.07
TTC39C-207ENST00000581394 ARXQ96QS3 562 aa8.39□□□□□ -1.07
TTC39C-207ENST00000581394 EIF2AK2P19525 551 aaKnown RBP8.38□□□□□ -1.07
TTC39C-207ENST00000581394 HFE2Q6ZVN8 426 aa8.38□□□□□ -1.07
TTC39C-207ENST00000581394 CLUAP1Q96AJ1 413 aa8.38□□□□□ -1.07
TTC39C-207ENST00000581394 MRPL18Q9H0U6 180 aaKnown RBP8.38□□□□□ -1.07
TTC39C-207ENST00000581394 AKTIPQ9H8T0 292 aa8.38□□□□□ -1.07
TTC39C-207ENST00000581394 VRTNQ9H8Y1 702 aa8.38□□□□□ -1.07
TTC39C-207ENST00000581394 SRA1Q9HD15 236 aaKnown RBP8.38□□□□□ -1.07
TTC39C-207ENST00000581394 RTCBQ9Y3I0 505 aaKnown RBP8.38□□□□□ -1.07
TTC39C-207ENST00000581394 HOXD8P13378 290 aaPredicted RBP8.37□□□□□ -1.07
TTC39C-207ENST00000581394 VTI1AQ96AJ9 217 aa8.37□□□□□ -1.07
TTC39C-207ENST00000581394 PLD4Q96BZ4 506 aa8.36□□□□□ -1.07
TTC39C-207ENST00000581394 CALR3Q96L12 384 aaKnown RBP8.36□□□□□ -1.07
TTC39C-207ENST00000581394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
TTC39C-207ENST00000581394 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
TTC39C-207ENST00000581394 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 F8W735 103 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-207ENST00000581394 XYLBO75191 536 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 FSTP19883 344 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 SOX18P35713 384 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 SIK1P57059 783 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 Q6ZS46 218 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 MAP4K3Q8IVH8 894 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 DCAF11Q8TEB1 546 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 USP20Q9Y2K6 914 aa8.35□□□□□ -1.07
TTC39C-207ENST00000581394 PSAPP07602 524 aa8.34□□□□□ -1.07
TTC39C-207ENST00000581394 LMOD1P29536 600 aaPredicted RBP8.34□□□□□ -1.07
TTC39C-207ENST00000581394 KCNMB2Q9Y691 235 aa8.34□□□□□ -1.07
TTC39C-207ENST00000581394 J3QW42 95 aa8.33□□□□□ -1.08
TTC39C-207ENST00000581394 MMP20O60882 483 aa8.33□□□□□ -1.08
TTC39C-207ENST00000581394 ALX3O95076 343 aa8.33□□□□□ -1.08
TTC39C-207ENST00000581394 GHRHP01286 108 aa8.33□□□□□ -1.08
TTC39C-207ENST00000581394 TREML1Q86YW5 311 aa8.33□□□□□ -1.08
TTC39C-207ENST00000581394 CMTR1Q8N1G2 835 aaKnown RBP8.33□□□□□ -1.08
TTC39C-207ENST00000581394 CACTIN-AS1Q8N1I8 211 aa8.33□□□□□ -1.08
TTC39C-207ENST00000581394 IL22RA1Q8N6P7 574 aa8.33□□□□□ -1.08
TTC39C-207ENST00000581394 PRKCSHP14314 528 aaPredicted RBP8.32□□□□□ -1.08
TTC39C-207ENST00000581394 MCTP1Q6DN14 999 aa8.32□□□□□ -1.08
TTC39C-207ENST00000581394 GDF6Q6KF10 455 aaPredicted RBP8.32□□□□□ -1.08
TTC39C-207ENST00000581394 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
TTC39C-207ENST00000581394 RGL4Q8IZJ4 473 aa8.32□□□□□ -1.08
TTC39C-207ENST00000581394 RBSNQ9H1K0 784 aa8.32□□□□□ -1.08
TTC39C-207ENST00000581394 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
TTC39C-207ENST00000581394 NSUN5Q96P11 429 aaKnown RBP8.31□□□□□ -1.08
TTC39C-207ENST00000581394 PCMTD2Q9NV79 361 aa8.31□□□□□ -1.08
TTC39C-207ENST00000581394 A6NJR5 290 aa8.3□□□□□ -1.08
TTC39C-207ENST00000581394 CD97P48960 835 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms