RNA–Protein interactions for RNA: ENST00000581189.1

NDEL1-210, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-210ENST00000581189 ZBTB38Q8NAP3 1195 aaPredicted RBP8.54□□□□□ -1.04
NDEL1-210ENST00000581189 DNAAF4Q8WXU2 420 aa8.54□□□□□ -1.04
NDEL1-210ENST00000581189 FAM89AQ96GI7 184 aa8.54□□□□□ -1.04
NDEL1-210ENST00000581189 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
NDEL1-210ENST00000581189 F6X3S4 739 aa8.53□□□□□ -1.04
NDEL1-210ENST00000581189 PCCAP05165 728 aaPredicted RBP8.53□□□□□ -1.04
NDEL1-210ENST00000581189 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
NDEL1-210ENST00000581189 CASP7P55210 303 aa8.53□□□□□ -1.04
NDEL1-210ENST00000581189 SF3B3Q15393 1217 aaKnown RBP8.53□□□□□ -1.04
NDEL1-210ENST00000581189 CWF19L2Q2TBE0 894 aaKnown RBP8.53□□□□□ -1.04
NDEL1-210ENST00000581189 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
NDEL1-210ENST00000581189 LINS1Q8NG48 757 aa8.53□□□□□ -1.04
NDEL1-210ENST00000581189 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
NDEL1-210ENST00000581189 ZNF622Q969S3 477 aaKnown RBP eCLIP8.53□□□□□ -1.04
NDEL1-210ENST00000581189 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
NDEL1-210ENST00000581189 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
NDEL1-210ENST00000581189 CACNA1FO60840 1977 aa8.53□□□□□ -1.04
NDEL1-210ENST00000581189 IRS4O14654 1257 aaPredicted RBP8.52□□□□□ -1.05
NDEL1-210ENST00000581189 NPHP1O15259 732 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 ALDH1B1P30837 517 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 PRELPP51888 382 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 GCKRQ14397 625 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
NDEL1-210ENST00000581189 JARID2Q92833 1246 aaPredicted RBP8.52□□□□□ -1.05
NDEL1-210ENST00000581189 CRAMP1Q96RY5 1269 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 SNED1Q8TER0 1413 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 PTPRCP08575 1304 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 CDHR2Q9BYE9 1310 aa8.52□□□□□ -1.05
NDEL1-210ENST00000581189 NFKBIEO00221 500 aa8.51□□□□□ -1.05
NDEL1-210ENST00000581189 C21orf2O43822 256 aa8.51□□□□□ -1.05
NDEL1-210ENST00000581189 NEXNQ0ZGT2 675 aa8.51□□□□□ -1.05
NDEL1-210ENST00000581189 ARHGAP27Q6ZUM4 889 aa8.51□□□□□ -1.05
NDEL1-210ENST00000581189 BCL2L13Q9BXK5 485 aa8.51□□□□□ -1.05
NDEL1-210ENST00000581189 ARFGEF1Q9Y6D6 1849 aa8.51□□□□□ -1.05
NDEL1-210ENST00000581189 ABCC4O15439 1325 aa8.51□□□□□ -1.05
NDEL1-210ENST00000581189 SLX4Q8IY92 1834 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 HAX1O00165 279 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 ALDH1L1O75891 902 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 GSE1Q14687 1217 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 OLFM4Q6UX06 510 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 SLC51AQ86UW1 340 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 DDX60Q8IY21 1712 aaKnown RBP8.5□□□□□ -1.05
NDEL1-210ENST00000581189 RBM17Q96I25 401 aaKnown RBP8.5□□□□□ -1.05
NDEL1-210ENST00000581189 PLA2G12BQ9BX93 195 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 SMC4Q9NTJ3 1288 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 NOB1Q9ULX3 412 aaKnown RBP8.5□□□□□ -1.05
NDEL1-210ENST00000581189 KDM2BQ8NHM5 1336 aa8.5□□□□□ -1.05
NDEL1-210ENST00000581189 PITPNM1O00562 1244 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 PDE8AO60658 829 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 BCAR3O75815 825 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 BBOX1O75936 387 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 CSF1RP07333 972 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 TTLL11Q8NHH1 800 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 ARHGAP45Q92619 1136 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 RPGRQ92834 1020 aaKnown RBP8.49□□□□□ -1.05
NDEL1-210ENST00000581189 COL4A1P02462 1669 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 UTYO14607 1347 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 LTBP3Q9NS15 1303 aa8.49□□□□□ -1.05
NDEL1-210ENST00000581189 HSP90B1P14625 803 aaKnown RBP8.48□□□□□ -1.05
NDEL1-210ENST00000581189 YY1P25490 414 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 FOXO4P98177 505 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 GRAPQ13588 217 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 SOGA3Q5TF21 947 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 DDX46Q7L014 1031 aaKnown RBP8.48□□□□□ -1.05
NDEL1-210ENST00000581189 UBE3BQ7Z3V4 1068 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 SP8Q8IXZ3 490 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 GRAPLQ8TC17 118 aaPredicted RBP8.48□□□□□ -1.05
NDEL1-210ENST00000581189 CELF1Q92879 486 aaKnown RBP8.48□□□□□ -1.05
NDEL1-210ENST00000581189 KAZALD1Q96I82 304 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 ATP6V0A2Q9Y487 856 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 LAMB2P55268 1798 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 RTL9Q8NET4 1388 aa8.48□□□□□ -1.05
NDEL1-210ENST00000581189 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 GRM8O00222 908 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 PPEF1O14829 653 aaPredicted RBP8.47□□□□□ -1.05
NDEL1-210ENST00000581189 NBPF7P0C2Y1 421 aaPredicted RBP8.47□□□□□ -1.05
NDEL1-210ENST00000581189 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 LMNB1P20700 586 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 CTSWP56202 376 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 RASSF7Q02833 373 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 BECN1Q14457 450 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 CCDC93Q567U6 631 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 EPHA10Q5JZY3 1008 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 C9orf131Q5VYM1 1079 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 CC2D2BQ6DHV5 1058 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 SLC4A10Q6U841 1118 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 RTKN2Q8IZC4 609 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 CRBNQ96SW2 442 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 PSMD1Q99460 953 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 API5Q9BZZ5 524 aaKnown RBP8.47□□□□□ -1.05
NDEL1-210ENST00000581189 USP44Q9H0E7 712 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
NDEL1-210ENST00000581189 RPS8P62241 208 aaKnown RBP8.46□□□□□ -1.06
NDEL1-210ENST00000581189 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
NDEL1-210ENST00000581189 CCDC152Q4G0S7 254 aa8.46□□□□□ -1.06
NDEL1-210ENST00000581189 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
NDEL1-210ENST00000581189 TMC4Q7Z404 712 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms