RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 ANKRD36BQ8N2N9 1353 aa8.45□□□□□ -1.06
SENP3-206ENST00000581093 USP54Q70EL1 1684 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 GOLGA6CA6NDK9 693 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 GOLGA6BA6NDN3 693 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 GOLGA6DP0CG33 693 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
SENP3-206ENST00000581093 LBX1P52954 281 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 SMAP1Q8IYB5 467 aaPredicted RBP8.44□□□□□ -1.06
SENP3-206ENST00000581093 DDX54Q8TDD1 881 aaKnown RBP8.44□□□□□ -1.06
SENP3-206ENST00000581093 MAF1Q9H063 256 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 PDCL3Q9H2J4 239 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 GOLGA6AQ9NYA3 693 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 MKRN1Q9UHC7 482 aaKnown RBP8.44□□□□□ -1.06
SENP3-206ENST00000581093 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 ARIH1Q9Y4X5 557 aaPredicted RBP8.44□□□□□ -1.06
SENP3-206ENST00000581093 NSD2O96028 1365 aa8.44□□□□□ -1.06
SENP3-206ENST00000581093 N4BP2Q86UW6 1770 aaPredicted RBP8.43□□□□□ -1.06
SENP3-206ENST00000581093 A0A0G2JLW4 131 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 CREB3O43889 395 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 RAB11FIP3O75154 756 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 EIF3JO75822 258 aaKnown RBP8.43□□□□□ -1.06
SENP3-206ENST00000581093 FCHSD2O94868 740 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 SCP2P22307 547 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 TGFB2P61812 414 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 MAP2K1Q02750 393 aaPredicted RBP8.43□□□□□ -1.06
SENP3-206ENST00000581093 SREK1Q8WXA9 508 aaKnown RBP8.43□□□□□ -1.06
SENP3-206ENST00000581093 KCNK17Q96T54 332 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 FRMD4BQ9Y2L6 1034 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 C5P01031 1676 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 KIF13BQ9NQT8 1826 aa8.43□□□□□ -1.06
SENP3-206ENST00000581093 EPB41L2O43491 1005 aaKnown RBP8.42□□□□□ -1.06
SENP3-206ENST00000581093 VEGFAP15692 232 aaPredicted RBP8.42□□□□□ -1.06
SENP3-206ENST00000581093 TSR1Q2NL82 804 aaKnown RBP8.42□□□□□ -1.06
SENP3-206ENST00000581093 PPP4R3BQ5MIZ7 849 aa8.42□□□□□ -1.06
SENP3-206ENST00000581093 METTL14Q9HCE5 456 aaKnown RBP8.42□□□□□ -1.06
SENP3-206ENST00000581093 RNF181Q9P0P0 153 aa8.42□□□□□ -1.06
SENP3-206ENST00000581093 SERPINA10Q9UK55 444 aa8.42□□□□□ -1.06
SENP3-206ENST00000581093 SUPT16HQ9Y5B9 1047 aaKnown RBP8.42□□□□□ -1.06
SENP3-206ENST00000581093 USP47Q96K76 1375 aa8.42□□□□□ -1.06
SENP3-206ENST00000581093 KIAA1551Q9HCM1 1747 aa8.42□□□□□ -1.06
SENP3-206ENST00000581093 TAF1LQ8IZX4 1826 aa8.42□□□□□ -1.06
SENP3-206ENST00000581093 SBF1O95248 1867 aa8.41□□□□□ -1.06
SENP3-206ENST00000581093 DHX16O60231 1041 aaKnown RBP8.41□□□□□ -1.06
SENP3-206ENST00000581093 SH3BP5O60239 455 aa8.41□□□□□ -1.06
SENP3-206ENST00000581093 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
SENP3-206ENST00000581093 TCF3P15923 654 aa8.41□□□□□ -1.06
SENP3-206ENST00000581093 SMIM5Q71RC9 77 aa8.41□□□□□ -1.06
SENP3-206ENST00000581093 AMIGO3Q86WK7 504 aa8.41□□□□□ -1.06
SENP3-206ENST00000581093 WNT2BQ93097 391 aa8.41□□□□□ -1.06
SENP3-206ENST00000581093 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
SENP3-206ENST00000581093 CIZ1Q9ULV3 898 aaPredicted RBP8.41□□□□□ -1.06
SENP3-206ENST00000581093 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.06
SENP3-206ENST00000581093 ARFGEF1Q9Y6D6 1849 aa8.4□□□□□ -1.06
SENP3-206ENST00000581093 DOT1LQ8TEK3 1739 aa8.4□□□□□ -1.06
SENP3-206ENST00000581093 ZNF500O60304 480 aaPredicted RBP8.4□□□□□ -1.06
SENP3-206ENST00000581093 PEX14O75381 377 aa8.4□□□□□ -1.06
SENP3-206ENST00000581093 MAP4K4O95819 1239 aaPredicted RBP8.4□□□□□ -1.06
SENP3-206ENST00000581093 RHBDL3P58872 404 aa8.4□□□□□ -1.06
SENP3-206ENST00000581093 ZKSCAN2Q63HK3 967 aa8.4□□□□□ -1.06
SENP3-206ENST00000581093 RBM28Q9NW13 759 aaKnown RBP8.4□□□□□ -1.06
SENP3-206ENST00000581093 PNMA2Q9UL42 364 aa8.4□□□□□ -1.06
SENP3-206ENST00000581093 CNTNAP1P78357 1384 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 UBR3Q6ZT12 1888 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
SENP3-206ENST00000581093 GOLGA8CPA6NN73 597 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 MMP10P09238 476 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 DPEP1P16444 411 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 COPB2P35606 906 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 SRPK2P78362 688 aaKnown RBP8.39□□□□□ -1.07
SENP3-206ENST00000581093 AK7Q96M32 723 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 MPHOSPH9Q99550 1183 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 ARHGEF10LQ9HCE6 1279 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 NFAT5O94916 1531 aa8.39□□□□□ -1.07
SENP3-206ENST00000581093 TOGARAM1Q9Y4F4 1720 aa8.38□□□□□ -1.07
SENP3-206ENST00000581093 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
SENP3-206ENST00000581093 SATB1Q01826 763 aa8.38□□□□□ -1.07
SENP3-206ENST00000581093 KCNA1Q09470 495 aa8.38□□□□□ -1.07
SENP3-206ENST00000581093 CCDC97Q96F63 343 aaPredicted RBP8.38□□□□□ -1.07
SENP3-206ENST00000581093 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
SENP3-206ENST00000581093 SYNPO2Q9UMS6 1093 aa8.38□□□□□ -1.07
SENP3-206ENST00000581093 COMMD10Q9Y6G5 202 aa8.38□□□□□ -1.07
SENP3-206ENST00000581093 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
SENP3-206ENST00000581093 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 C4BP0C0L5 1744 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 GLTPD2A6NH11 291 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 KIF4AO95239 1232 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 VEGFBP49765 207 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 ZRSR2Q15696 482 aaKnown RBP8.37□□□□□ -1.07
SENP3-206ENST00000581093 UVSSAQ2YD98 709 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
SENP3-206ENST00000581093 GET4Q7L5D6 327 aaPredicted RBP8.37□□□□□ -1.07
SENP3-206ENST00000581093 ANKRD24Q8TF21 1146 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
SENP3-206ENST00000581093 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
SENP3-206ENST00000581093 KCNA3P22001 575 aa8.36□□□□□ -1.07
SENP3-206ENST00000581093 PAX3P23760 479 aa8.36□□□□□ -1.07
SENP3-206ENST00000581093 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
SENP3-206ENST00000581093 AMOTL1Q8IY63 956 aa8.36□□□□□ -1.07
SENP3-206ENST00000581093 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms