RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 C4AP0C0L4 1744 aa13.62□□□□□ -0.23
SKA2-206ENST00000581068 GYS1P13807 737 aa13.62□□□□□ -0.23
SKA2-206ENST00000581068 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
SKA2-206ENST00000581068 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
SKA2-206ENST00000581068 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
SKA2-206ENST00000581068 SLC10A5Q5PT55 438 aa13.62□□□□□ -0.23
SKA2-206ENST00000581068 TPTE2Q6XPS3 522 aa13.62□□□□□ -0.23
SKA2-206ENST00000581068 NBPF5PQ86XG9 351 aaPredicted RBP13.62□□□□□ -0.23
SKA2-206ENST00000581068 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
SKA2-206ENST00000581068 STK32BQ9NY57 414 aa13.62□□□□□ -0.23
SKA2-206ENST00000581068 ANKRD18BA2A2Z9 1011 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 NFIXQ14938 502 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 COL23A1Q86Y22 540 aaPredicted RBP13.61□□□□□ -0.23
SKA2-206ENST00000581068 NUTM1Q86Y26 1132 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 PLEKHM2Q8IWE5 1019 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 KLHDC4Q8TBB5 520 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 SIL1Q9H173 461 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
SKA2-206ENST00000581068 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
SKA2-206ENST00000581068 CARMIL3Q8ND23 1372 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 CIAO1O76071 339 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 SASH1O94885 1247 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 TM4SF1P30408 202 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 SLC15A2Q16348 729 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 CCDC152Q4G0S7 254 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
SKA2-206ENST00000581068 IL1RAPL2Q9NP60 686 aa13.6□□□□□ -0.23
SKA2-206ENST00000581068 EYA2O00167 538 aa13.59□□□□□ -0.23
SKA2-206ENST00000581068 ITGA6P23229 1130 aa13.59□□□□□ -0.23
SKA2-206ENST00000581068 IL15P40933 162 aaPredicted RBP13.59□□□□□ -0.23
SKA2-206ENST00000581068 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
SKA2-206ENST00000581068 NLGN1Q8N2Q7 840 aa13.59□□□□□ -0.23
SKA2-206ENST00000581068 ZNF594Q96JF6 807 aaPredicted RBP13.59□□□□□ -0.23
SKA2-206ENST00000581068 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
SKA2-206ENST00000581068 GREM2Q9H772 168 aa13.59□□□□□ -0.23
SKA2-206ENST00000581068 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
SKA2-206ENST00000581068 COL24A1Q17RW2 1714 aa13.59□□□□□ -0.23
SKA2-206ENST00000581068 RTL9Q8NET4 1388 aa13.58□□□□□ -0.23
SKA2-206ENST00000581068 NPHP1O15259 732 aa13.58□□□□□ -0.24
SKA2-206ENST00000581068 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.24
SKA2-206ENST00000581068 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
SKA2-206ENST00000581068 OTUD7AQ8TE49 926 aaPredicted RBP13.58□□□□□ -0.24
SKA2-206ENST00000581068 OSBPL3Q9H4L5 887 aa13.58□□□□□ -0.24
SKA2-206ENST00000581068 STAP2Q9UGK3 403 aa13.58□□□□□ -0.24
SKA2-206ENST00000581068 SERPINB2P05120 415 aa13.57□□□□□ -0.24
SKA2-206ENST00000581068 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
SKA2-206ENST00000581068 MX1P20591 662 aa13.57□□□□□ -0.24
SKA2-206ENST00000581068 PDE1AP54750 535 aa13.57□□□□□ -0.24
SKA2-206ENST00000581068 TFCP2Q12800 502 aa13.57□□□□□ -0.24
SKA2-206ENST00000581068 NLRP3Q96P20 1036 aa13.57□□□□□ -0.24
SKA2-206ENST00000581068 LAMB2P55268 1798 aa13.57□□□□□ -0.24
SKA2-206ENST00000581068 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
SKA2-206ENST00000581068 MYH3P11055 1940 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 DDX60Q8IY21 1712 aaKnown RBP13.56□□□□□ -0.24
SKA2-206ENST00000581068 LRRC24Q50LG9 513 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 BMP2KLQ5H9B9 411 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 TTC22Q5TAA0 569 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 AACSQ86V21 672 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
SKA2-206ENST00000581068 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
SKA2-206ENST00000581068 GPR108Q9NPR9 543 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 AOX1Q06278 1338 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 ABCC12Q96J65 1359 aa13.56□□□□□ -0.24
SKA2-206ENST00000581068 ST5P78524 1137 aa13.55□□□□□ -0.24
SKA2-206ENST00000581068 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
SKA2-206ENST00000581068 EAF2Q96CJ1 260 aaPredicted RBP13.55□□□□□ -0.24
SKA2-206ENST00000581068 GPATCH3Q96I76 525 aa13.55□□□□□ -0.24
SKA2-206ENST00000581068 CDC5LQ99459 802 aaKnown RBP13.55□□□□□ -0.24
SKA2-206ENST00000581068 BACH2Q9BYV9 841 aa13.55□□□□□ -0.24
SKA2-206ENST00000581068 CNNM1Q9NRU3 951 aa13.55□□□□□ -0.24
SKA2-206ENST00000581068 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
SKA2-206ENST00000581068 POLRMTO00411 1230 aaKnown RBP13.54□□□□□ -0.24
SKA2-206ENST00000581068 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
SKA2-206ENST00000581068 DDR1Q08345 913 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 TNNI3KQ59H18 835 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 C3orf67Q6ZVT6 689 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 SEC31BQ9NQW1 1179 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 AKAP2Q9Y2D5 859 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 FPGT-TNNI3KV9GXZ4 949 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
SKA2-206ENST00000581068 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
SKA2-206ENST00000581068 CCDC24Q8N4L8 307 aa13.53□□□□□ -0.24
SKA2-206ENST00000581068 MPHOSPH8Q99549 860 aa13.53□□□□□ -0.24
SKA2-206ENST00000581068 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
SKA2-206ENST00000581068 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
SKA2-206ENST00000581068 PARP3Q9Y6F1 533 aa13.53□□□□□ -0.24
SKA2-206ENST00000581068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.53□□□□□ -0.24
SKA2-206ENST00000581068 ERC2O15083 957 aa13.52□□□□□ -0.25
SKA2-206ENST00000581068 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
SKA2-206ENST00000581068 METTL24Q5JXM2 366 aa13.52□□□□□ -0.25
SKA2-206ENST00000581068 ANKRD18AQ8IVF6 992 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms