RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 H7C1D1 291 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 RAD17O75943 681 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
RFFL-208ENST00000581039 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 MCOLN1Q9GZU1 580 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 CNOT7Q9UIV1 285 aaKnown RBP13.08□□□□□ -0.32
RFFL-208ENST00000581039 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 CDHR2Q9BYE9 1310 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
RFFL-208ENST00000581039 HCLS1P14317 486 aaPredicted RBP13.07□□□□□ -0.32
RFFL-208ENST00000581039 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
RFFL-208ENST00000581039 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
RFFL-208ENST00000581039 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
RFFL-208ENST00000581039 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
RFFL-208ENST00000581039 NOGQ13253 232 aa13.06□□□□□ -0.32
RFFL-208ENST00000581039 DGKZQ13574 1117 aa13.06□□□□□ -0.32
RFFL-208ENST00000581039 PDIA6Q15084 440 aa13.06□□□□□ -0.32
RFFL-208ENST00000581039 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
RFFL-208ENST00000581039 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
RFFL-208ENST00000581039 TRPM7Q96QT4 1865 aa13.06□□□□□ -0.32
RFFL-208ENST00000581039 ANXA1P04083 346 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 HUNKP57058 714 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
RFFL-208ENST00000581039 GRAPQ13588 217 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 TMC4Q7Z404 712 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
RFFL-208ENST00000581039 TRPM4Q8TD43 1214 aa13.05□□□□□ -0.32
RFFL-208ENST00000581039 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
RFFL-208ENST00000581039 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
RFFL-208ENST00000581039 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
RFFL-208ENST00000581039 DPF2Q92785 391 aa13.04□□□□□ -0.32
RFFL-208ENST00000581039 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
RFFL-208ENST00000581039 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
RFFL-208ENST00000581039 SHTN1A0MZ66 631 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 RIPK4P57078 832 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 ZIC5Q96T25 663 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 BABAM1Q9NWV8 329 aa13.03□□□□□ -0.32
RFFL-208ENST00000581039 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
RFFL-208ENST00000581039 RGMBQ6NW40 437 aa13.02□□□□□ -0.33
RFFL-208ENST00000581039 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
RFFL-208ENST00000581039 KRT26Q7Z3Y9 468 aa13.02□□□□□ -0.33
RFFL-208ENST00000581039 C2orf69Q8N8R5 385 aa13.02□□□□□ -0.33
RFFL-208ENST00000581039 CCDC102AQ96A19 550 aa13.02□□□□□ -0.33
RFFL-208ENST00000581039 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
RFFL-208ENST00000581039 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
RFFL-208ENST00000581039 PSMD14O00487 310 aa13.01□□□□□ -0.33
RFFL-208ENST00000581039 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
RFFL-208ENST00000581039 TBC1D10BQ4KMP7 808 aaPredicted RBP13.01□□□□□ -0.33
RFFL-208ENST00000581039 RBM26Q5T8P6 1007 aaKnown RBP13.01□□□□□ -0.33
RFFL-208ENST00000581039 DLK2Q6UY11 383 aa13.01□□□□□ -0.33
RFFL-208ENST00000581039 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
RFFL-208ENST00000581039 DBNDD1Q9H9R9 158 aa13.01□□□□□ -0.33
RFFL-208ENST00000581039 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
RFFL-208ENST00000581039 CASP8AP2Q9UKL3 1982 aa13□□□□□ -0.33
RFFL-208ENST00000581039 RPS12P25398 132 aaKnown RBP13□□□□□ -0.33
RFFL-208ENST00000581039 ZNF157P51786 506 aaPredicted RBP13□□□□□ -0.33
RFFL-208ENST00000581039 ZNF428Q96B54 188 aa13□□□□□ -0.33
RFFL-208ENST00000581039 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
RFFL-208ENST00000581039 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
RFFL-208ENST00000581039 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
RFFL-208ENST00000581039 EYA3Q99504 573 aa12.99□□□□□ -0.33
RFFL-208ENST00000581039 SAGE1Q9NXZ1 904 aa12.99□□□□□ -0.33
RFFL-208ENST00000581039 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
RFFL-208ENST00000581039 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
RFFL-208ENST00000581039 TRPA1O75762 1119 aa12.98□□□□□ -0.33
RFFL-208ENST00000581039 GPSM2P81274 684 aa12.98□□□□□ -0.33
RFFL-208ENST00000581039 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
RFFL-208ENST00000581039 DOK7Q18PE1 504 aa12.98□□□□□ -0.33
RFFL-208ENST00000581039 ANKRD13DQ6ZTN6 518 aa12.98□□□□□ -0.33
RFFL-208ENST00000581039 CELF1Q92879 486 aaKnown RBP12.98□□□□□ -0.33
RFFL-208ENST00000581039 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
RFFL-208ENST00000581039 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
RFFL-208ENST00000581039 ADM5C9JUS6 153 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 G3V3G9 751 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 ECE2O60344 883 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 EGFRP00533 1210 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
RFFL-208ENST00000581039 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 PLBD2Q8NHP8 589 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 ZC3H12CQ9C0D7 883 aaKnown RBP12.97□□□□□ -0.33
RFFL-208ENST00000581039 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 RNF186Q9NXI6 227 aa12.97□□□□□ -0.33
RFFL-208ENST00000581039 ATP5J2-PTCD1G3V325 749 aa12.96□□□□□ -0.33
RFFL-208ENST00000581039 RPS8P62241 208 aaKnown RBP12.96□□□□□ -0.33
RFFL-208ENST00000581039 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
RFFL-208ENST00000581039 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.33
RFFL-208ENST00000581039 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
RFFL-208ENST00000581039 CHPF2Q9P2E5 772 aa12.96□□□□□ -0.33
RFFL-208ENST00000581039 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
RFFL-208ENST00000581039 ANKRD36CQ5JPF3 1778 aa12.95□□□□□ -0.34
RFFL-208ENST00000581039 CHL1O00533 1208 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 379.5 ms