RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 C7orf43Q8WVR3 580 aa19.46■□□□□ 0.71
CDC6-204ENST00000580824 C9orf78Q9NZ63 289 aaPredicted RBP19.46■□□□□ 0.71
CDC6-204ENST00000580824 RCAN3Q9UKA8 241 aa19.46■□□□□ 0.71
CDC6-204ENST00000580824 GRIPAP1Q4V328 841 aa19.45■□□□□ 0.7
CDC6-204ENST00000580824 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
CDC6-204ENST00000580824 TMC4Q7Z404 712 aa19.45■□□□□ 0.7
CDC6-204ENST00000580824 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
CDC6-204ENST00000580824 BBOX1O75936 387 aa19.44■□□□□ 0.7
CDC6-204ENST00000580824 GRAPQ13588 217 aa19.44■□□□□ 0.7
CDC6-204ENST00000580824 GRAPLQ8TC17 118 aaPredicted RBP19.44■□□□□ 0.7
CDC6-204ENST00000580824 FRAT1Q92837 279 aaPredicted RBP19.44■□□□□ 0.7
CDC6-204ENST00000580824 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
CDC6-204ENST00000580824 LRRC37AA6NMS7 1700 aa19.43■□□□□ 0.7
CDC6-204ENST00000580824 TTLL11Q8NHH1 800 aa19.43■□□□□ 0.7
CDC6-204ENST00000580824 JARID2Q92833 1246 aaPredicted RBP19.43■□□□□ 0.7
CDC6-204ENST00000580824 USP44Q9H0E7 712 aa19.43■□□□□ 0.7
CDC6-204ENST00000580824 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
CDC6-204ENST00000580824 CSF1RP07333 972 aa19.42■□□□□ 0.7
CDC6-204ENST00000580824 LTBP3Q9NS15 1303 aa19.42■□□□□ 0.7
CDC6-204ENST00000580824 PPEF1O14829 653 aaPredicted RBP19.41■□□□□ 0.7
CDC6-204ENST00000580824 C21orf2O43822 256 aa19.41■□□□□ 0.7
CDC6-204ENST00000580824 NBPF7P0C2Y1 421 aaPredicted RBP19.41■□□□□ 0.7
CDC6-204ENST00000580824 MS4A1P11836 297 aa19.41■□□□□ 0.7
CDC6-204ENST00000580824 CCDC93Q567U6 631 aa19.41■□□□□ 0.7
CDC6-204ENST00000580824 HDAC5Q9UQL6 1122 aa19.41■□□□□ 0.7
CDC6-204ENST00000580824 TAF1P21675 1872 aa19.41■□□□□ 0.7
CDC6-204ENST00000580824 FOXO4P98177 505 aa19.4■□□□□ 0.7
CDC6-204ENST00000580824 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
CDC6-204ENST00000580824 ATP6V0A2Q9Y487 856 aa19.4■□□□□ 0.7
CDC6-204ENST00000580824 SBF1O95248 1867 aa19.39■□□□□ 0.7
CDC6-204ENST00000580824 ARHGAP27Q6ZUM4 889 aa19.39■□□□□ 0.69
CDC6-204ENST00000580824 SP8Q8IXZ3 490 aa19.39■□□□□ 0.69
CDC6-204ENST00000580824 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.69
CDC6-204ENST00000580824 CDC5LQ99459 802 aaKnown RBP19.39■□□□□ 0.69
CDC6-204ENST00000580824 RPS8P62241 208 aaKnown RBP19.38■□□□□ 0.69
CDC6-204ENST00000580824 RABL6Q3YEC7 729 aaPredicted RBP19.38■□□□□ 0.69
CDC6-204ENST00000580824 FTSJ3Q8IY81 847 aaKnown RBP19.38■□□□□ 0.69
CDC6-204ENST00000580824 KAZALD1Q96I82 304 aa19.38■□□□□ 0.69
CDC6-204ENST00000580824 GREM2Q9H772 168 aa19.38■□□□□ 0.69
CDC6-204ENST00000580824 NFKBIEO00221 500 aa19.37■□□□□ 0.69
CDC6-204ENST00000580824 GNAI3P08754 354 aa19.37■□□□□ 0.69
CDC6-204ENST00000580824 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
CDC6-204ENST00000580824 CELF1Q92879 486 aaKnown RBP19.37■□□□□ 0.69
CDC6-204ENST00000580824 SUCLG2Q96I99 432 aa19.37■□□□□ 0.69
CDC6-204ENST00000580824 PSMD1Q99460 953 aa19.37■□□□□ 0.69
CDC6-204ENST00000580824 TMX4Q9H1E5 349 aaPredicted RBP19.37■□□□□ 0.69
CDC6-204ENST00000580824 TAOK3Q9H2K8 898 aa19.37■□□□□ 0.69
CDC6-204ENST00000580824 COL4A1P02462 1669 aa19.36■□□□□ 0.69
CDC6-204ENST00000580824 UBTFL1P0CB47 393 aaPredicted RBP19.36■□□□□ 0.69
CDC6-204ENST00000580824 FAM161AQ3B820 660 aa19.36■□□□□ 0.69
CDC6-204ENST00000580824 EPHA10Q5JZY3 1008 aa19.36■□□□□ 0.69
CDC6-204ENST00000580824 CLUAP1Q96AJ1 413 aa19.36■□□□□ 0.69
CDC6-204ENST00000580824 SEC31BQ9NQW1 1179 aa19.36■□□□□ 0.69
CDC6-204ENST00000580824 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
CDC6-204ENST00000580824 LTBP1Q14766 1721 aa19.35■□□□□ 0.69
CDC6-204ENST00000580824 ITGA6P23229 1130 aa19.35■□□□□ 0.69
CDC6-204ENST00000580824 LMBR1LQ6UX01 489 aa19.35■□□□□ 0.69
CDC6-204ENST00000580824 ANKRD18AQ8IVF6 992 aa19.35■□□□□ 0.69
CDC6-204ENST00000580824 TMEM57Q8N5G2 664 aa19.35■□□□□ 0.69
CDC6-204ENST00000580824 TNNQ9UQP3 1299 aa19.35■□□□□ 0.69
CDC6-204ENST00000580824 ZC3H4Q9UPT8 1303 aaKnown RBP19.34■□□□□ 0.69
CDC6-204ENST00000580824 LMNB1P20700 586 aa19.34■□□□□ 0.69
CDC6-204ENST00000580824 FKBP4Q02790 459 aaKnown RBP eCLIP19.34■□□□□ 0.69
CDC6-204ENST00000580824 IFIT5Q13325 482 aaKnown RBP19.34■□□□□ 0.69
CDC6-204ENST00000580824 ANKRD44Q8N8A2 993 aa19.34■□□□□ 0.69
CDC6-204ENST00000580824 MEIS3Q99687 375 aa19.34■□□□□ 0.69
CDC6-204ENST00000580824 BICC1Q9H694 974 aaKnown RBP19.34■□□□□ 0.69
CDC6-204ENST00000580824 BSDC1Q9NW68 430 aaPredicted RBP19.34■□□□□ 0.69
CDC6-204ENST00000580824 ZNF219Q9P2Y4 722 aaPredicted RBP19.34■□□□□ 0.69
CDC6-204ENST00000580824 CCDC88AQ3V6T2 1871 aa19.33■□□□□ 0.69
CDC6-204ENST00000580824 ANKRD18BA2A2Z9 1011 aa19.33■□□□□ 0.68
CDC6-204ENST00000580824 RLBP1P12271 317 aa19.33■□□□□ 0.68
CDC6-204ENST00000580824 PDE3AQ14432 1141 aa19.33■□□□□ 0.68
CDC6-204ENST00000580824 CCDC85AQ96PX6 553 aaPredicted RBP19.33■□□□□ 0.68
CDC6-204ENST00000580824 RTFDC1Q9BY42 306 aaPredicted RBP19.33■□□□□ 0.68
CDC6-204ENST00000580824 IGHMBP2P38935 993 aaKnown RBP19.32■□□□□ 0.68
CDC6-204ENST00000580824 CCDC57Q2TAC2 916 aa19.32■□□□□ 0.68
CDC6-204ENST00000580824 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
CDC6-204ENST00000580824 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
CDC6-204ENST00000580824 SPEF2Q9C093 1822 aa19.32■□□□□ 0.68
CDC6-204ENST00000580824 RASSF7Q02833 373 aa19.31■□□□□ 0.68
CDC6-204ENST00000580824 SUPT20HQ8NEM7 779 aa19.31■□□□□ 0.68
CDC6-204ENST00000580824 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
CDC6-204ENST00000580824 DUOX1Q9NRD9 1551 aa19.31■□□□□ 0.68
CDC6-204ENST00000580824 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
CDC6-204ENST00000580824 MPNDQ8N594 471 aa19.3■□□□□ 0.68
CDC6-204ENST00000580824 PRELPP51888 382 aa19.29■□□□□ 0.68
CDC6-204ENST00000580824 MTX1Q13505 466 aa19.29■□□□□ 0.68
CDC6-204ENST00000580824 C9orf131Q5VYM1 1079 aa19.29■□□□□ 0.68
CDC6-204ENST00000580824 DPP8Q6V1X1 898 aaPredicted RBP19.29■□□□□ 0.68
CDC6-204ENST00000580824 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
CDC6-204ENST00000580824 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
CDC6-204ENST00000580824 CHMP3Q9Y3E7 222 aa19.29■□□□□ 0.68
CDC6-204ENST00000580824 LRRFIP2Q9Y608 721 aaKnown RBP19.29■□□□□ 0.68
CDC6-204ENST00000580824 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
CDC6-204ENST00000580824 ZBTB7BO15156 539 aaPredicted RBP19.28■□□□□ 0.68
CDC6-204ENST00000580824 GNAI2P04899 355 aa19.28■□□□□ 0.68
CDC6-204ENST00000580824 MVPQ14764 893 aaKnown RBP19.28■□□□□ 0.68
CDC6-204ENST00000580824 CHMP4BQ9H444 224 aaKnown RBP19.28■□□□□ 0.68
CDC6-204ENST00000580824 DDX19BQ9UMR2 479 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms