RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 COL4A1P02462 1669 aa34.31■■■■□ 3.08
LINC00271-207ENST00000580741 ZNF541Q9H0D2 1346 aa34.31■■■■□ 3.08
LINC00271-207ENST00000580741 GRIPAP1Q4V328 841 aa34.31■■■■□ 3.08
LINC00271-207ENST00000580741 SP8Q8IXZ3 490 aa34.31■■■■□ 3.08
LINC00271-207ENST00000580741 NEURL1BA8MQ27 555 aa34.3■■■■□ 3.08
LINC00271-207ENST00000580741 VEGFAP15692 232 aaPredicted RBP34.3■■■■□ 3.08
LINC00271-207ENST00000580741 COL4A5P29400 1685 aa34.3■■■■□ 3.08
LINC00271-207ENST00000580741 POTECB2RU33 542 aa34.29■■■■□ 3.08
LINC00271-207ENST00000580741 DIEXFQ68CQ4 756 aaKnown RBP34.28■■■■□ 3.08
LINC00271-207ENST00000580741 DNAAF4Q8WXU2 420 aa34.28■■■■□ 3.08
LINC00271-207ENST00000580741 CCDC85AQ96PX6 553 aaPredicted RBP34.28■■■■□ 3.08
LINC00271-207ENST00000580741 WDR90Q96KV7 1748 aa34.27■■■■□ 3.08
LINC00271-207ENST00000580741 E9PSI1 815 aa34.27■■■■□ 3.08
LINC00271-207ENST00000580741 PDE8AO60658 829 aa34.27■■■■□ 3.08
LINC00271-207ENST00000580741 DPP8Q6V1X1 898 aaPredicted RBP34.27■■■■□ 3.08
LINC00271-207ENST00000580741 LARGE2Q8N3Y3 721 aa34.27■■■■□ 3.08
LINC00271-207ENST00000580741 RBM46Q8TBY0 533 aaKnown RBP34.27■■■■□ 3.08
LINC00271-207ENST00000580741 HSP90B1P14625 803 aaKnown RBP34.26■■■■□ 3.08
LINC00271-207ENST00000580741 MPNDQ8N594 471 aa34.26■■■■□ 3.08
LINC00271-207ENST00000580741 JDP2Q8WYK2 163 aa34.26■■■■□ 3.08
LINC00271-207ENST00000580741 SEC31BQ9NQW1 1179 aa34.26■■■■□ 3.08
LINC00271-207ENST00000580741 CACNA1FO60840 1977 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 F6X3S4 739 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 FZD9O00144 591 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 PPIP5K2O43314 1243 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 HSPA6P17066 643 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 AOC3Q16853 763 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 CDCA7LQ96GN5 454 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 CDHR2Q9BYE9 1310 aa34.25■■■■□ 3.07
LINC00271-207ENST00000580741 MIER1Q8N108 512 aa34.24■■■■□ 3.07
LINC00271-207ENST00000580741 SLFN5Q08AF3 891 aa34.23■■■■□ 3.07
LINC00271-207ENST00000580741 CCDC152Q4G0S7 254 aa34.23■■■■□ 3.07
LINC00271-207ENST00000580741 TMC4Q7Z404 712 aa34.23■■■■□ 3.07
LINC00271-207ENST00000580741 UBE3BQ7Z3V4 1068 aa34.22■■■■□ 3.07
LINC00271-207ENST00000580741 RTFDC1Q9BY42 306 aaPredicted RBP34.22■■■■□ 3.07
LINC00271-207ENST00000580741 GCKRQ14397 625 aa34.21■■■■□ 3.07
LINC00271-207ENST00000580741 SUPT20HQ8NEM7 779 aa34.21■■■■□ 3.07
LINC00271-207ENST00000580741 CTSWP56202 376 aa34.2■■■■□ 3.07
LINC00271-207ENST00000580741 RPS8P62241 208 aaKnown RBP34.2■■■■□ 3.07
LINC00271-207ENST00000580741 LINS1Q8NG48 757 aa34.2■■■■□ 3.07
LINC00271-207ENST00000580741 LRRC37AA6NMS7 1700 aa34.19■■■■□ 3.06
LINC00271-207ENST00000580741 H7C1W4 665 aa34.19■■■■□ 3.06
LINC00271-207ENST00000580741 NIM1KQ8IY84 436 aa34.19■■■■□ 3.06
LINC00271-207ENST00000580741 DUOX1Q9NRD9 1551 aa34.19■■■■□ 3.06
LINC00271-207ENST00000580741 EIF6P56537 245 aaKnown RBP34.18■■■■□ 3.06
LINC00271-207ENST00000580741 L3MBTL3Q96JM7 780 aaPredicted RBP34.18■■■■□ 3.06
LINC00271-207ENST00000580741 GPSM2P81274 684 aa34.17■■■■□ 3.06
LINC00271-207ENST00000580741 FSTL1Q12841 308 aa34.17■■■■□ 3.06
LINC00271-207ENST00000580741 NSFL1CQ9UNZ2 370 aaKnown RBP34.17■■■■□ 3.06
LINC00271-207ENST00000580741 GJA3Q9Y6H8 435 aa34.17■■■■□ 3.06
LINC00271-207ENST00000580741 SMC1BQ8NDV3 1235 aa34.16■■■■□ 3.06
LINC00271-207ENST00000580741 CEP350Q5VT06 3117 aa34.15■■■■□ 3.06
LINC00271-207ENST00000580741 BEND3Q5T5X7 828 aa34.15■■■■□ 3.06
LINC00271-207ENST00000580741 TTLL11Q8NHH1 800 aa34.15■■■■□ 3.06
LINC00271-207ENST00000580741 VPS33BQ9H267 617 aa34.15■■■■□ 3.06
LINC00271-207ENST00000580741 CASP7P55210 303 aa34.14■■■■□ 3.06
LINC00271-207ENST00000580741 KIAA2012Q0VF49 1180 aa34.14■■■■□ 3.06
LINC00271-207ENST00000580741 GREM2Q9H772 168 aa34.14■■■■□ 3.06
LINC00271-207ENST00000580741 POTEIP0CG38 1075 aa34.13■■■■□ 3.05
LINC00271-207ENST00000580741 POTEJP0CG39 1038 aa34.13■■■■□ 3.05
LINC00271-207ENST00000580741 GPC2Q8N158 579 aa34.13■■■■□ 3.05
LINC00271-207ENST00000580741 MRPL50Q8N5N7 158 aaKnown RBP34.13■■■■□ 3.05
LINC00271-207ENST00000580741 IQCA1LA6NCM1 817 aa34.12■■■■□ 3.05
LINC00271-207ENST00000580741 TAF1DQ9H5J8 278 aaPredicted RBP34.12■■■■□ 3.05
LINC00271-207ENST00000580741 C6orf229H3BNL8 230 aa34.11■■■■□ 3.05
LINC00271-207ENST00000580741 SLC4A10Q6U841 1118 aa34.11■■■■□ 3.05
LINC00271-207ENST00000580741 ANKRD18AQ8IVF6 992 aa34.11■■■■□ 3.05
LINC00271-207ENST00000580741 GPR101Q96P66 508 aaPredicted RBP34.11■■■■□ 3.05
LINC00271-207ENST00000580741 BCL2L13Q9BXK5 485 aa34.11■■■■□ 3.05
LINC00271-207ENST00000580741 POLLQ9UGP5 575 aa34.11■■■■□ 3.05
LINC00271-207ENST00000580741 TRMT2AQ8IZ69 625 aaKnown RBP34.1■■■■□ 3.05
LINC00271-207ENST00000580741 SSH1Q8WYL5 1049 aa34.1■■■■□ 3.05
LINC00271-207ENST00000580741 HACL1Q9UJ83 578 aa34.1■■■■□ 3.05
LINC00271-207ENST00000580741 ZNRF3Q9ULT6 936 aa34.1■■■■□ 3.05
LINC00271-207ENST00000580741 PLA2G12BQ9BX93 195 aa34.09■■■■□ 3.05
LINC00271-207ENST00000580741 MYH3P11055 1940 aa34.08■■■■□ 3.05
LINC00271-207ENST00000580741 RIMBP2O15034 1052 aa34.08■■■■□ 3.05
LINC00271-207ENST00000580741 CDC5LQ99459 802 aaKnown RBP34.08■■■■□ 3.05
LINC00271-207ENST00000580741 SCN4AP35499 1836 aa34.07■■■■□ 3.04
LINC00271-207ENST00000580741 WASHC4Q2M389 1173 aa34.07■■■■□ 3.04
LINC00271-207ENST00000580741 TBC1D16Q8TBP0 767 aa34.07■■■■□ 3.04
LINC00271-207ENST00000580741 LTBP1Q14766 1721 aa34.07■■■■□ 3.04
LINC00271-207ENST00000580741 EPHX2P34913 555 aa34.06■■■■□ 3.04
LINC00271-207ENST00000580741 APLP1P51693 650 aa34.06■■■■□ 3.04
LINC00271-207ENST00000580741 CXCL9Q07325 125 aa34.06■■■■□ 3.04
LINC00271-207ENST00000580741 FAM161AQ3B820 660 aa34.06■■■■□ 3.04
LINC00271-207ENST00000580741 EAPPQ56P03 285 aaPredicted RBP34.06■■■■□ 3.04
LINC00271-207ENST00000580741 ANKIB1Q9P2G1 1089 aa34.06■■■■□ 3.04
LINC00271-207ENST00000580741 RTL9Q8NET4 1388 aa34.06■■■■□ 3.04
LINC00271-207ENST00000580741 YDJCA8MPS7 323 aa34.04■■■■□ 3.04
LINC00271-207ENST00000580741 RAD17O75943 681 aa34.04■■■■□ 3.04
LINC00271-207ENST00000580741 UFL1O94874 794 aa34.04■■■■□ 3.04
LINC00271-207ENST00000580741 HTRA3P83110 453 aa34.04■■■■□ 3.04
LINC00271-207ENST00000580741 DBNDD1Q9H9R9 158 aa34.04■■■■□ 3.04
LINC00271-207ENST00000580741 PODXL2Q9NZ53 605 aa34.04■■■■□ 3.04
LINC00271-207ENST00000580741 SCNN1DP51172 638 aa34.03■■■■□ 3.04
LINC00271-207ENST00000580741 CHADLQ6NUI6 762 aa34.03■■■■□ 3.04
LINC00271-207ENST00000580741 SRCIN1Q9C0H9 1055 aa34.03■■■■□ 3.04
LINC00271-207ENST00000580741 GGA1Q9UJY5 639 aa34.03■■■■□ 3.04
LINC00271-207ENST00000580741 GRM8O00222 908 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms