RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TEX13AQ9BXU3 409 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-217ENST00000580654 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
SMARCE1-217ENST00000580654 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
SMARCE1-217ENST00000580654 POLR2AP24928 1970 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 TRPA1O75762 1119 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 HMOX1P09601 288 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 NUBP1P53384 320 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 HUNKP57058 714 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 KIF23Q02241 960 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 TPTE2Q6XPS3 522 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 NPC1L1Q9UHC9 1359 aa10.5□□□□□ -0.73
SMARCE1-217ENST00000580654 KCNQ3O43525 872 aa10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 GMPSP49915 693 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 CXCL9Q07325 125 aa10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 CC2D2BQ6DHV5 1058 aa10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 RGMBQ6NW40 437 aa10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 IL17REQ8NFR9 667 aa10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 TRPM4Q8TD43 1214 aa10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 NIP7Q9Y221 180 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 USP16Q9Y5T5 823 aa10.49□□□□□ -0.73
SMARCE1-217ENST00000580654 A0A0C4DFX4 3053 aa10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 MKI67P46013 3256 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 SHTN1A0MZ66 631 aa10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 PRAMEF22A3QJZ6 481 aa10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 FXR1P51114 621 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 EMP3P54852 163 aa10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 CDC37L1Q7L3B6 337 aa10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 ZC3H15Q8WU90 426 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 RIC1Q4ADV7 1423 aa10.48□□□□□ -0.73
SMARCE1-217ENST00000580654 NUP98P52948 1817 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 HOXA10P31260 410 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 HLFQ16534 295 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 AOC3Q16853 763 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 USP48Q86UV5 1035 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 FMNL2Q96PY5 1086 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 CSRNP1Q96S65 589 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 CUL9Q8IWT3 2517 aa10.47□□□□□ -0.73
SMARCE1-217ENST00000580654 NBPF26B4DH59 902 aa10.46□□□□□ -0.73
SMARCE1-217ENST00000580654 PPIP5K2O43314 1243 aa10.46□□□□□ -0.73
SMARCE1-217ENST00000580654 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-217ENST00000580654 NPM2Q86SE8 214 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-217ENST00000580654 NUTM1Q86Y26 1132 aa10.46□□□□□ -0.73
SMARCE1-217ENST00000580654 FAM212AQ96EL1 285 aa10.46□□□□□ -0.73
SMARCE1-217ENST00000580654 ZNF652Q9Y2D9 606 aa10.46□□□□□ -0.73
SMARCE1-217ENST00000580654 CDHR2Q9BYE9 1310 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 TCERG1O14776 1098 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 RGL2O15211 777 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 SLC10A3P09131 477 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 GRIPAP1Q4V328 841 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 MORC1Q86VD1 984 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 PANK3Q9H999 370 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 GBA2Q9HCG7 927 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 ZNRF3Q9ULT6 936 aa10.45□□□□□ -0.74
SMARCE1-217ENST00000580654 CEMIPQ8WUJ3 1361 aa10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 KIF7Q2M1P5 1343 aa10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 DLL1O00548 723 aa10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 PPEF1O14829 653 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 ZNF157P51786 506 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 TEFQ10587 303 aa10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 C3orf67Q6ZVT6 689 aa10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 POLR3GLQ9BT43 218 aa10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 SZT2Q5T011 3432 aa10.44□□□□□ -0.74
SMARCE1-217ENST00000580654 RAD17O75943 681 aa10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 EGFRP00533 1210 aa10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 PKN2Q16513 984 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 RPGRQ92834 1020 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 CRAMP1Q96RY5 1269 aa10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 CNOT7Q9UIV1 285 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 RBBP6Q7Z6E9 1792 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 PAPPA2Q9BXP8 1791 aa10.43□□□□□ -0.74
SMARCE1-217ENST00000580654 LAMB2P55268 1798 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 YDJCA8MPS7 323 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 GTF2E1P29083 439 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 SAMD7Q7Z3H4 446 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 C2orf69Q8N8R5 385 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 ZNF296Q8WUU4 475 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 BCL2L13Q9BXK5 485 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 RTFDC1Q9BY42 306 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 VPS33BQ9H267 617 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 LAMB4A4D0S4 1761 aa10.42□□□□□ -0.74
SMARCE1-217ENST00000580654 DUOX1Q9NRD9 1551 aa10.41□□□□□ -0.74
SMARCE1-217ENST00000580654 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
SMARCE1-217ENST00000580654 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
SMARCE1-217ENST00000580654 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
SMARCE1-217ENST00000580654 RASAL3Q86YV0 1011 aa10.41□□□□□ -0.74
SMARCE1-217ENST00000580654 MICALL2Q8IY33 904 aa10.41□□□□□ -0.74
SMARCE1-217ENST00000580654 ATP6V0A2Q9Y487 856 aa10.41□□□□□ -0.74
SMARCE1-217ENST00000580654 TAF1P21675 1872 aa10.4□□□□□ -0.74
SMARCE1-217ENST00000580654 UBN2Q6ZU65 1347 aa10.4□□□□□ -0.74
SMARCE1-217ENST00000580654 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms