RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 JDP2Q8WYK2 163 aa13.88□□□□□ -0.19
NDEL1-208ENST00000580237 JARID2Q92833 1246 aaPredicted RBP13.88□□□□□ -0.19
NDEL1-208ENST00000580237 PSMD1Q99460 953 aa13.88□□□□□ -0.19
NDEL1-208ENST00000580237 ATP6V0A2Q9Y487 856 aa13.88□□□□□ -0.19
NDEL1-208ENST00000580237 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
NDEL1-208ENST00000580237 SCN4AP35499 1836 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 KIF3CO14782 793 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 PDE8AO60658 829 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 IGKV5-2P06315 115 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
NDEL1-208ENST00000580237 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
NDEL1-208ENST00000580237 UBE3BQ7Z3V4 1068 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 LARGE2Q8N3Y3 721 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
NDEL1-208ENST00000580237 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
NDEL1-208ENST00000580237 SLFN5Q08AF3 891 aa13.86□□□□□ -0.19
NDEL1-208ENST00000580237 SLC51AQ86UW1 340 aa13.86□□□□□ -0.19
NDEL1-208ENST00000580237 SUPT20HQ8NEM7 779 aa13.86□□□□□ -0.19
NDEL1-208ENST00000580237 LINS1Q8NG48 757 aa13.86□□□□□ -0.19
NDEL1-208ENST00000580237 CCDC85AQ96PX6 553 aaPredicted RBP13.86□□□□□ -0.19
NDEL1-208ENST00000580237 RRAGCQ9HB90 399 aa13.86□□□□□ -0.19
NDEL1-208ENST00000580237 COL4A1P02462 1669 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 F6X3S4 739 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 CTSWP56202 376 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 SLC4A10Q6U841 1118 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 MPNDQ8N594 471 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
NDEL1-208ENST00000580237 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
NDEL1-208ENST00000580237 DUOX1Q9NRD9 1551 aa13.84□□□□□ -0.19
NDEL1-208ENST00000580237 TOMM70O94826 608 aa13.84□□□□□ -0.19
NDEL1-208ENST00000580237 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
NDEL1-208ENST00000580237 GCKRQ14397 625 aa13.84□□□□□ -0.19
NDEL1-208ENST00000580237 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
NDEL1-208ENST00000580237 ZNF541Q9H0D2 1346 aa13.84□□□□□ -0.19
NDEL1-208ENST00000580237 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
NDEL1-208ENST00000580237 COL4A5P29400 1685 aa13.83□□□□□ -0.2
NDEL1-208ENST00000580237 DDNO94850 711 aaPredicted RBP13.83□□□□□ -0.2
NDEL1-208ENST00000580237 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
NDEL1-208ENST00000580237 EIF6P56537 245 aaKnown RBP13.83□□□□□ -0.2
NDEL1-208ENST00000580237 AOC3Q16853 763 aa13.83□□□□□ -0.2
NDEL1-208ENST00000580237 ANKRD18AQ8IVF6 992 aa13.83□□□□□ -0.2
NDEL1-208ENST00000580237 CDC5LQ99459 802 aaKnown RBP13.83□□□□□ -0.2
NDEL1-208ENST00000580237 SMC4Q9NTJ3 1288 aa13.83□□□□□ -0.2
NDEL1-208ENST00000580237 RPS8P62241 208 aaKnown RBP13.82□□□□□ -0.2
NDEL1-208ENST00000580237 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
NDEL1-208ENST00000580237 NSFL1CQ9UNZ2 370 aaKnown RBP13.82□□□□□ -0.2
NDEL1-208ENST00000580237 IQCA1LA6NCM1 817 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 C6orf229H3BNL8 230 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 RBM46Q8TBY0 533 aaKnown RBP13.81□□□□□ -0.2
NDEL1-208ENST00000580237 SSH1Q8WYL5 1049 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 SRCIN1Q9C0H9 1055 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
NDEL1-208ENST00000580237 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 CHMP3Q9Y3E7 222 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 PTPRCP08575 1304 aa13.81□□□□□ -0.2
NDEL1-208ENST00000580237 H7C1W4 665 aa13.8□□□□□ -0.2
NDEL1-208ENST00000580237 FZD9O00144 591 aa13.8□□□□□ -0.2
NDEL1-208ENST00000580237 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
NDEL1-208ENST00000580237 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
NDEL1-208ENST00000580237 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
NDEL1-208ENST00000580237 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
NDEL1-208ENST00000580237 RTFDC1Q9BY42 306 aaPredicted RBP13.8□□□□□ -0.2
NDEL1-208ENST00000580237 VPS33BQ9H267 617 aa13.8□□□□□ -0.2
NDEL1-208ENST00000580237 GREM2Q9H772 168 aa13.8□□□□□ -0.2
NDEL1-208ENST00000580237 A0A1B0GUL6 1792 aa13.8□□□□□ -0.2
NDEL1-208ENST00000580237 GRM8O00222 908 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 UFL1O94874 794 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 LMOD1P29536 600 aaPredicted RBP13.79□□□□□ -0.2
NDEL1-208ENST00000580237 IGHMBP2P38935 993 aaKnown RBP13.79□□□□□ -0.2
NDEL1-208ENST00000580237 GPSM2P81274 684 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 FAM161AQ3B820 660 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 GPC2Q8N158 579 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 SMC1BQ8NDV3 1235 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 TTLL11Q8NHH1 800 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 EYA3Q99504 573 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 RTL9Q8NET4 1388 aa13.79□□□□□ -0.2
NDEL1-208ENST00000580237 G3V3G9 751 aa13.78□□□□□ -0.2
NDEL1-208ENST00000580237 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
NDEL1-208ENST00000580237 DCAF8Q5TAQ9 597 aa13.78□□□□□ -0.2
NDEL1-208ENST00000580237 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
NDEL1-208ENST00000580237 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
NDEL1-208ENST00000580237 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
NDEL1-208ENST00000580237 ZNRF3Q9ULT6 936 aa13.78□□□□□ -0.2
NDEL1-208ENST00000580237 PSME4Q14997 1843 aa13.78□□□□□ -0.2
NDEL1-208ENST00000580237 RIMBP2O15034 1052 aa13.77□□□□□ -0.21
NDEL1-208ENST00000580237 HSPA6P17066 643 aa13.77□□□□□ -0.21
NDEL1-208ENST00000580237 ITGA6P23229 1130 aa13.77□□□□□ -0.21
NDEL1-208ENST00000580237 XDHP47989 1333 aa13.77□□□□□ -0.21
NDEL1-208ENST00000580237 FSTL1Q12841 308 aa13.77□□□□□ -0.21
NDEL1-208ENST00000580237 EAPPQ56P03 285 aaPredicted RBP13.77□□□□□ -0.21
NDEL1-208ENST00000580237 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
NDEL1-208ENST00000580237 MPHOSPH8Q99549 860 aa13.77□□□□□ -0.21
NDEL1-208ENST00000580237 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms