RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
SNX11-206ENST00000580219 TRIOBPQ9H2D6 2365 aa12.29□□□□□ -0.44
SNX11-206ENST00000580219 TRPM7Q96QT4 1865 aa12.28□□□□□ -0.44
SNX11-206ENST00000580219 AOC2O75106 756 aa12.28□□□□□ -0.44
SNX11-206ENST00000580219 PYGBP11216 843 aa12.28□□□□□ -0.44
SNX11-206ENST00000580219 FLIIQ13045 1269 aa12.28□□□□□ -0.44
SNX11-206ENST00000580219 LINC00116Q8NCU8 138 aa12.28□□□□□ -0.44
SNX11-206ENST00000580219 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
SNX11-206ENST00000580219 PDZRN3Q9UPQ7 1066 aa12.28□□□□□ -0.44
SNX11-206ENST00000580219 DDNO94850 711 aaPredicted RBP12.27□□□□□ -0.45
SNX11-206ENST00000580219 CABP4P57796 275 aa12.27□□□□□ -0.45
SNX11-206ENST00000580219 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
SNX11-206ENST00000580219 BRCA2P51587 3418 aa12.26□□□□□ -0.45
SNX11-206ENST00000580219 RGS3P49796 1198 aa12.26□□□□□ -0.45
SNX11-206ENST00000580219 EAPPQ56P03 285 aaPredicted RBP12.26□□□□□ -0.45
SNX11-206ENST00000580219 G2E3Q7L622 706 aa12.26□□□□□ -0.45
SNX11-206ENST00000580219 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
SNX11-206ENST00000580219 MPNDQ8N594 471 aa12.26□□□□□ -0.45
SNX11-206ENST00000580219 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
SNX11-206ENST00000580219 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
SNX11-206ENST00000580219 IQCA1LA6NCM1 817 aa12.25□□□□□ -0.45
SNX11-206ENST00000580219 NFKBIEO00221 500 aa12.25□□□□□ -0.45
SNX11-206ENST00000580219 NUCB1Q02818 461 aa12.25□□□□□ -0.45
SNX11-206ENST00000580219 PIGBQ92521 554 aa12.25□□□□□ -0.45
SNX11-206ENST00000580219 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
SNX11-206ENST00000580219 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
SNX11-206ENST00000580219 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
SNX11-206ENST00000580219 MAP2K2P36507 400 aa12.24□□□□□ -0.45
SNX11-206ENST00000580219 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
SNX11-206ENST00000580219 FKBP5Q13451 457 aaPredicted RBP12.24□□□□□ -0.45
SNX11-206ENST00000580219 C8orf34Q49A92 452 aa12.24□□□□□ -0.45
SNX11-206ENST00000580219 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
SNX11-206ENST00000580219 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
SNX11-206ENST00000580219 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
SNX11-206ENST00000580219 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
SNX11-206ENST00000580219 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
SNX11-206ENST00000580219 VCANP13611 3396 aa12.24□□□□□ -0.45
SNX11-206ENST00000580219 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
SNX11-206ENST00000580219 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
SNX11-206ENST00000580219 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
SNX11-206ENST00000580219 GNAI3P08754 354 aa12.23□□□□□ -0.45
SNX11-206ENST00000580219 MAP1SQ66K74 1059 aaPredicted RBP12.23□□□□□ -0.45
SNX11-206ENST00000580219 ZNF790Q6PG37 636 aa12.23□□□□□ -0.45
SNX11-206ENST00000580219 CNTROBQ8N137 903 aa12.23□□□□□ -0.45
SNX11-206ENST00000580219 KCNQ3O43525 872 aa12.22□□□□□ -0.45
SNX11-206ENST00000580219 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
SNX11-206ENST00000580219 GYS1P13807 737 aa12.22□□□□□ -0.45
SNX11-206ENST00000580219 SLC39A6Q13433 755 aa12.22□□□□□ -0.45
SNX11-206ENST00000580219 CHD1LQ86WJ1 897 aa12.22□□□□□ -0.45
SNX11-206ENST00000580219 SIRT2Q8IXJ6 389 aa12.22□□□□□ -0.45
SNX11-206ENST00000580219 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
SNX11-206ENST00000580219 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
SNX11-206ENST00000580219 HMMRO75330 724 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
SNX11-206ENST00000580219 CEP85Q6P2H3 762 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
SNX11-206ENST00000580219 MEIS3Q99687 375 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 DCTPP1Q9H773 170 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 ATG3Q9NT62 314 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
SNX11-206ENST00000580219 CENPFP49454 3210 aa12.21□□□□□ -0.46
SNX11-206ENST00000580219 CEP290O15078 2479 aa12.2□□□□□ -0.46
SNX11-206ENST00000580219 F6X3S4 739 aa12.2□□□□□ -0.46
SNX11-206ENST00000580219 GNAI2P04899 355 aa12.2□□□□□ -0.46
SNX11-206ENST00000580219 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
SNX11-206ENST00000580219 SLC4A10Q6U841 1118 aa12.2□□□□□ -0.46
SNX11-206ENST00000580219 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
SNX11-206ENST00000580219 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
SNX11-206ENST00000580219 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNX11-206ENST00000580219 AFDNP55196 1824 aaKnown RBP12.2□□□□□ -0.46
SNX11-206ENST00000580219 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
SNX11-206ENST00000580219 SIK1P57059 783 aa12.19□□□□□ -0.46
SNX11-206ENST00000580219 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
SNX11-206ENST00000580219 NECTIN2Q92692 538 aa12.19□□□□□ -0.46
SNX11-206ENST00000580219 FMNL2Q96PY5 1086 aa12.19□□□□□ -0.46
SNX11-206ENST00000580219 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
SNX11-206ENST00000580219 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
SNX11-206ENST00000580219 DDX58O95786 925 aaKnown RBP12.18□□□□□ -0.46
SNX11-206ENST00000580219 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
SNX11-206ENST00000580219 ITPK1Q13572 414 aa12.18□□□□□ -0.46
SNX11-206ENST00000580219 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
SNX11-206ENST00000580219 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
SNX11-206ENST00000580219 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
SNX11-206ENST00000580219 PHAXQ9H814 394 aaKnown RBP12.18□□□□□ -0.46
SNX11-206ENST00000580219 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
SNX11-206ENST00000580219 HPS5Q9UPZ3 1129 aa12.18□□□□□ -0.46
SNX11-206ENST00000580219 HDAC5Q9UQL6 1122 aa12.18□□□□□ -0.46
SNX11-206ENST00000580219 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
SNX11-206ENST00000580219 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
SNX11-206ENST00000580219 SPTBN5Q9NRC6 3674 aaKnown RBP12.17□□□□□ -0.46
SNX11-206ENST00000580219 ZNF831Q5JPB2 1677 aa12.17□□□□□ -0.46
SNX11-206ENST00000580219 FMR1Q06787 632 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX11-206ENST00000580219 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
SNX11-206ENST00000580219 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
SNX11-206ENST00000580219 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
SNX11-206ENST00000580219 TJP1Q07157 1748 aa12.17□□□□□ -0.46
SNX11-206ENST00000580219 LAMB4A4D0S4 1761 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 AKAP11Q9UKA4 1901 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms