RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 LINS1Q8NG48 757 aa20.78■□□□□ 0.92
RARA-209ENST00000579727 C7orf43Q8WVR3 580 aa20.78■□□□□ 0.92
RARA-209ENST00000579727 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
RARA-209ENST00000579727 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
RARA-209ENST00000579727 GCKRQ14397 625 aa20.77■□□□□ 0.92
RARA-209ENST00000579727 C9orf131Q5VYM1 1079 aa20.77■□□□□ 0.92
RARA-209ENST00000579727 UBE3BQ7Z3V4 1068 aa20.77■□□□□ 0.92
RARA-209ENST00000579727 CRAMP1Q96RY5 1269 aa20.77■□□□□ 0.92
RARA-209ENST00000579727 RNF181Q9P0P0 153 aa20.77■□□□□ 0.92
RARA-209ENST00000579727 CT47B1P0C2W7 299 aaPredicted RBP20.76■□□□□ 0.91
RARA-209ENST00000579727 CCDC93Q567U6 631 aa20.76■□□□□ 0.91
RARA-209ENST00000579727 DDX46Q7L014 1031 aaKnown RBP20.76■□□□□ 0.91
RARA-209ENST00000579727 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
RARA-209ENST00000579727 CDHR2Q9BYE9 1310 aa20.76■□□□□ 0.91
RARA-209ENST00000579727 PDE8AO60658 829 aa20.75■□□□□ 0.91
RARA-209ENST00000579727 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
RARA-209ENST00000579727 PTPRCP08575 1304 aa20.75■□□□□ 0.91
RARA-209ENST00000579727 H7C1W4 665 aa20.74■□□□□ 0.91
RARA-209ENST00000579727 GRAPQ13588 217 aa20.74■□□□□ 0.91
RARA-209ENST00000579727 SF3B3Q15393 1217 aaKnown RBP20.74■□□□□ 0.91
RARA-209ENST00000579727 SOGA3Q5TF21 947 aa20.74■□□□□ 0.91
RARA-209ENST00000579727 TNS4Q8IZW8 715 aa20.74■□□□□ 0.91
RARA-209ENST00000579727 RBM46Q8TBY0 533 aaKnown RBP20.74■□□□□ 0.91
RARA-209ENST00000579727 GRAPLQ8TC17 118 aaPredicted RBP20.74■□□□□ 0.91
RARA-209ENST00000579727 TAOK3Q9H2K8 898 aa20.74■□□□□ 0.91
RARA-209ENST00000579727 NOB1Q9ULX3 412 aaKnown RBP20.74■□□□□ 0.91
RARA-209ENST00000579727 CELF1Q92879 486 aaKnown RBP20.73■□□□□ 0.91
RARA-209ENST00000579727 SRCIN1Q9C0H9 1055 aa20.73■□□□□ 0.91
RARA-209ENST00000579727 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
RARA-209ENST00000579727 SNED1Q8TER0 1413 aa20.72■□□□□ 0.91
RARA-209ENST00000579727 CASP7P55210 303 aa20.72■□□□□ 0.91
RARA-209ENST00000579727 DICER1Q9UPY3 1922 aaKnown RBP20.72■□□□□ 0.91
RARA-209ENST00000579727 LRRC37AA6NMS7 1700 aa20.72■□□□□ 0.91
RARA-209ENST00000579727 BCAR3O75815 825 aa20.71■□□□□ 0.91
RARA-209ENST00000579727 HSP90B1P14625 803 aaKnown RBP20.71■□□□□ 0.91
RARA-209ENST00000579727 LMNB1P20700 586 aa20.71■□□□□ 0.91
RARA-209ENST00000579727 CTSWP56202 376 aa20.71■□□□□ 0.91
RARA-209ENST00000579727 FKBP4Q02790 459 aaKnown RBP eCLIP20.7■□□□□ 0.9
RARA-209ENST00000579727 CCDC152Q4G0S7 254 aa20.7■□□□□ 0.9
RARA-209ENST00000579727 ZNF277Q9NRM2 450 aaPredicted RBP20.7■□□□□ 0.9
RARA-209ENST00000579727 ALDH1L1O75891 902 aa20.69■□□□□ 0.9
RARA-209ENST00000579727 RTKN2Q8IZC4 609 aa20.69■□□□□ 0.9
RARA-209ENST00000579727 ATP6V0A2Q9Y487 856 aa20.69■□□□□ 0.9
RARA-209ENST00000579727 LTBP3Q9NS15 1303 aa20.69■□□□□ 0.9
RARA-209ENST00000579727 GRM8O00222 908 aa20.68■□□□□ 0.9
RARA-209ENST00000579727 BBOX1O75936 387 aa20.68■□□□□ 0.9
RARA-209ENST00000579727 TTLL11Q8NHH1 800 aa20.68■□□□□ 0.9
RARA-209ENST00000579727 FRAT1Q92837 279 aaPredicted RBP20.68■□□□□ 0.9
RARA-209ENST00000579727 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
RARA-209ENST00000579727 GREM2Q9H772 168 aa20.68■□□□□ 0.9
RARA-209ENST00000579727 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
RARA-209ENST00000579727 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
RARA-209ENST00000579727 KIF16BQ96L93 1317 aa20.67■□□□□ 0.9
RARA-209ENST00000579727 FSTL1Q12841 308 aa20.66■□□□□ 0.9
RARA-209ENST00000579727 SP8Q8IXZ3 490 aa20.66■□□□□ 0.9
RARA-209ENST00000579727 TMX4Q9H1E5 349 aaPredicted RBP20.66■□□□□ 0.9
RARA-209ENST00000579727 DUOX1Q9NRD9 1551 aa20.66■□□□□ 0.9
RARA-209ENST00000579727 COL4A5P29400 1685 aa20.65■□□□□ 0.9
RARA-209ENST00000579727 NBPF7P0C2Y1 421 aaPredicted RBP20.65■□□□□ 0.9
RARA-209ENST00000579727 BRPF1P55201 1214 aaPredicted RBP20.65■□□□□ 0.9
RARA-209ENST00000579727 RPS8P62241 208 aaKnown RBP20.65■□□□□ 0.9
RARA-209ENST00000579727 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
RARA-209ENST00000579727 EPHA10Q5JZY3 1008 aa20.65■□□□□ 0.9
RARA-209ENST00000579727 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
RARA-209ENST00000579727 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
RARA-209ENST00000579727 PLA2G12BQ9BX93 195 aa20.65■□□□□ 0.9
RARA-209ENST00000579727 API5Q9BZZ5 524 aaKnown RBP20.65■□□□□ 0.9
RARA-209ENST00000579727 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.89
RARA-209ENST00000579727 FOXO4P98177 505 aa20.64■□□□□ 0.89
RARA-209ENST00000579727 DPP8Q6V1X1 898 aaPredicted RBP20.64■□□□□ 0.89
RARA-209ENST00000579727 SUCLG2Q96I99 432 aa20.64■□□□□ 0.89
RARA-209ENST00000579727 PSMD1Q99460 953 aa20.64■□□□□ 0.89
RARA-209ENST00000579727 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.89
RARA-209ENST00000579727 LTBP1Q14766 1721 aa20.64■□□□□ 0.89
RARA-209ENST00000579727 ANKRD18AQ8IVF6 992 aa20.63■□□□□ 0.89
RARA-209ENST00000579727 MPNDQ8N594 471 aa20.63■□□□□ 0.89
RARA-209ENST00000579727 ITGA6P23229 1130 aa20.62■□□□□ 0.89
RARA-209ENST00000579727 GPSM2P81274 684 aa20.62■□□□□ 0.89
RARA-209ENST00000579727 TMC4Q7Z404 712 aa20.62■□□□□ 0.89
RARA-209ENST00000579727 RTL9Q8NET4 1388 aa20.61■□□□□ 0.89
RARA-209ENST00000579727 CSF1RP07333 972 aa20.61■□□□□ 0.89
RARA-209ENST00000579727 AOC3Q16853 763 aa20.61■□□□□ 0.89
RARA-209ENST00000579727 LMBR1LQ6UX01 489 aa20.61■□□□□ 0.89
RARA-209ENST00000579727 CLUAP1Q96AJ1 413 aa20.61■□□□□ 0.89
RARA-209ENST00000579727 CDC5LQ99459 802 aaKnown RBP20.61■□□□□ 0.89
RARA-209ENST00000579727 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
RARA-209ENST00000579727 NSFL1CQ9UNZ2 370 aaKnown RBP20.61■□□□□ 0.89
RARA-209ENST00000579727 TRIM27P14373 513 aa20.6■□□□□ 0.89
RARA-209ENST00000579727 CCT4P50991 539 aaKnown RBP20.6■□□□□ 0.89
RARA-209ENST00000579727 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
RARA-209ENST00000579727 GPR101Q96P66 508 aaPredicted RBP20.6■□□□□ 0.89
RARA-209ENST00000579727 USP44Q9H0E7 712 aa20.6■□□□□ 0.89
RARA-209ENST00000579727 UTYO14607 1347 aa20.59■□□□□ 0.89
RARA-209ENST00000579727 PPIP5K2O43314 1243 aa20.59■□□□□ 0.89
RARA-209ENST00000579727 GRIPAP1Q4V328 841 aa20.59■□□□□ 0.89
RARA-209ENST00000579727 ATF7IPQ6VMQ6 1270 aa20.59■□□□□ 0.89
RARA-209ENST00000579727 LARGE2Q8N3Y3 721 aa20.59■□□□□ 0.89
RARA-209ENST00000579727 ARHGAP45Q92619 1136 aa20.59■□□□□ 0.89
RARA-209ENST00000579727 BICC1Q9H694 974 aaKnown RBP20.59■□□□□ 0.89
RARA-209ENST00000579727 ZNF541Q9H0D2 1346 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms