RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 TSKSQ9UJT2 592 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 KNSTRNQ9Y448 316 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 PPM1GO15355 546 aaPredicted RBP4.54□□□□□ -1.68
CDH19-204ENST00000579658 MTHFSP49914 203 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 NUBP1P53384 320 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 GRM1Q13255 1194 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 RGMBQ6NW40 437 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 SETDB2Q96T68 719 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 DDX60Q8IY21 1712 aaKnown RBP4.53□□□□□ -1.68
CDH19-204ENST00000579658 NPHP1O15259 732 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 PTCD1O75127 700 aaKnown RBP4.53□□□□□ -1.68
CDH19-204ENST00000579658 EIF5P55010 431 aaKnown RBP4.53□□□□□ -1.68
CDH19-204ENST00000579658 CLEC4GQ6UXB4 293 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 SYNE4Q8N205 404 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 SUPT20HQ8NEM7 779 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 UBE2Q2Q8WVN8 375 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 CFHR5Q9BXR6 569 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 RNF186Q9NXI6 227 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 POLKQ9UBT6 870 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 HDAC9Q9UKV0 1011 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 ZNF652Q9Y2D9 606 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 SNED1Q8TER0 1413 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.53□□□□□ -1.68
CDH19-204ENST00000579658 IL6STP40189 918 aaPredicted RBP4.53□□□□□ -1.68
CDH19-204ENST00000579658 SCNN1DP51172 638 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 FKBP1BP68106 108 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 MORC1Q86VD1 984 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 DNAJC10Q8IXB1 793 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 C2orf69Q8N8R5 385 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 SLC17A8Q8NDX2 589 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 ZFP91Q96JP5 570 aaPredicted RBP4.53□□□□□ -1.68
CDH19-204ENST00000579658 GPRC5DQ9NZD1 345 aa4.53□□□□□ -1.68
CDH19-204ENST00000579658 IBTKQ9P2D0 1353 aaPredicted RBP4.52□□□□□ -1.69
CDH19-204ENST00000579658 SLC10A3P09131 477 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 NIM1KQ8IY84 436 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 ZNF277Q9NRM2 450 aaPredicted RBP4.52□□□□□ -1.69
CDH19-204ENST00000579658 PAPPA2Q9BXP8 1791 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 A0A1W2PPC1 479 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 FAM155AB1AL88 458 aaPredicted RBP4.52□□□□□ -1.69
CDH19-204ENST00000579658 HUNKP57058 714 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 PDE4CQ08493 712 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 TNIP1Q15025 636 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 TBC1D9BQ66K14 1250 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 TMX4Q9H1E5 349 aaPredicted RBP4.52□□□□□ -1.69
CDH19-204ENST00000579658 SLC52A2Q9HAB3 445 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 STK24Q9Y6E0 443 aa4.52□□□□□ -1.69
CDH19-204ENST00000579658 LAMB1P07942 1786 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 CAPN2P17655 700 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 KIF23Q02241 960 aaPredicted RBP4.51□□□□□ -1.69
CDH19-204ENST00000579658 CCDC82Q8N4S0 544 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 NFATC2IPQ8NCF5 419 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 RGS22Q8NE09 1264 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 CCDC136Q96JN2 1154 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 KDM4CQ9H3R0 1056 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 GBA2Q9HCG7 927 aaPredicted RBP4.51□□□□□ -1.69
CDH19-204ENST00000579658 ZBTB1Q9Y2K1 713 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 GJA3Q9Y6H8 435 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 TNRC18O15417 2968 aaPredicted RBP4.51□□□□□ -1.69
CDH19-204ENST00000579658 GOLGB1Q14789 3259 aaKnown RBP4.51□□□□□ -1.69
CDH19-204ENST00000579658 TRAF5O00463 557 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 ST18O60284 1047 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 EPS15P42566 896 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 TPTE2Q6XPS3 522 aa4.51□□□□□ -1.69
CDH19-204ENST00000579658 SUPT16HQ9Y5B9 1047 aaKnown RBP4.51□□□□□ -1.69
CDH19-204ENST00000579658 TRPA1O75762 1119 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 ALDH1A1P00352 501 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 FMR1Q06787 632 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDH19-204ENST00000579658 EIF4A2Q14240 407 aaKnown RBP4.5□□□□□ -1.69
CDH19-204ENST00000579658 ANKRD13DQ6ZTN6 518 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 NBPF5PQ86XG9 351 aaPredicted RBP4.5□□□□□ -1.69
CDH19-204ENST00000579658 LARGE2Q8N3Y3 721 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 NYXQ9GZU5 481 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 SIPA1L3O60292 1781 aaPredicted RBP4.5□□□□□ -1.69
CDH19-204ENST00000579658 KDM3BQ7LBC6 1761 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 H7C1D1 291 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 PPP2R1AP30153 589 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 ZNF157P51786 506 aaPredicted RBP4.5□□□□□ -1.69
CDH19-204ENST00000579658 SREBF2Q12772 1141 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 GPR153Q6NV75 609 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 TTC5Q8N0Z6 440 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 ZNRF3Q9ULT6 936 aa4.5□□□□□ -1.69
CDH19-204ENST00000579658 NPC1L1Q9UHC9 1359 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 ZNF609O15014 1411 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 FKTNO75072 461 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 CAMTA2O94983 1202 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 RPS12P25398 132 aaKnown RBP4.49□□□□□ -1.69
CDH19-204ENST00000579658 HOXA10P31260 410 aaPredicted RBP4.49□□□□□ -1.69
CDH19-204ENST00000579658 ARHGEF6Q15052 776 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 CCDC184Q52MB2 194 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 KCTD17Q8N5Z5 321 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 DPF2Q92785 391 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 CRAMP1Q96RY5 1269 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 GLIS2Q9BZE0 524 aaPredicted RBP4.49□□□□□ -1.69
CDH19-204ENST00000579658 WDR70Q9NW82 654 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 CANXP27824 592 aaKnown RBP4.49□□□□□ -1.69
CDH19-204ENST00000579658 CRY2Q49AN0 593 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 AEBP1Q8IUX7 1158 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 CSRNP1Q96S65 589 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms