RNA–Protein interactions for RNA: ENST00000579650.5

PROCA1-208, Transcript of protein interacting with cyclin A1, human

TSL 1 (best)

Gene PROCA1, Length 1,007 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PROCA1-208	ENST00000579650	LTBP3	Q9NS15	1303 aa		28.86	■■■□□ 2.21
PROCA1-208	ENST00000579650	C9orf131	Q5VYM1	1079 aa		28.85	■■■□□ 2.21
PROCA1-208	ENST00000579650	PLA2G12B	Q9BX93	195 aa		28.85	■■■□□ 2.21
PROCA1-208	ENST00000579650	BBOX1	O75936	387 aa		28.84	■■■□□ 2.21
PROCA1-208	ENST00000579650	COL4A1	P02462	1669 aa		28.83	■■■□□ 2.21
PROCA1-208	ENST00000579650	BCAR3	O75815	825 aa		28.83	■■■□□ 2.21
PROCA1-208	ENST00000579650	CTSW	P56202	376 aa		28.83	■■■□□ 2.21
PROCA1-208	ENST00000579650	CC2D2B	Q6DHV5	1058 aa		28.83	■■■□□ 2.21
PROCA1-208	ENST00000579650	SBF1	O95248	1867 aa		28.83	■■■□□ 2.2
PROCA1-208	ENST00000579650	GRM8	O00222	908 aa		28.82	■■■□□ 2.2
PROCA1-208	ENST00000579650	CCDC152	Q4G0S7	254 aa		28.82	■■■□□ 2.2
PROCA1-208	ENST00000579650	RTKN2	Q8IZC4	609 aa		28.82	■■■□□ 2.2
PROCA1-208	ENST00000579650	CELF1	Q92879	486 aa	Known RBP	28.82	■■■□□ 2.2
PROCA1-208	ENST00000579650	TAOK3	Q9H2K8	898 aa		28.82	■■■□□ 2.2
PROCA1-208	ENST00000579650	ATP6V0A2	Q9Y487	856 aa		28.82	■■■□□ 2.2
PROCA1-208	ENST00000579650	TAF1	P21675	1872 aa		28.81	■■■□□ 2.2
PROCA1-208	ENST00000579650	KIF16B	Q96L93	1317 aa		28.81	■■■□□ 2.2
PROCA1-208	ENST00000579650	LMNB1	P20700	586 aa		28.81	■■■□□ 2.2
PROCA1-208	ENST00000579650	TTLL11	Q8NHH1	800 aa		28.81	■■■□□ 2.2
PROCA1-208	ENST00000579650	SEC31B	Q9NQW1	1179 aa		28.81	■■■□□ 2.2
PROCA1-208	ENST00000579650	RNF181	Q9P0P0	153 aa		28.81	■■■□□ 2.2
PROCA1-208	ENST00000579650	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.8	■■■□□ 2.2
PROCA1-208	ENST00000579650	ARHGAP45	Q92619	1136 aa		28.8	■■■□□ 2.2
PROCA1-208	ENST00000579650	API5	Q9BZZ5	524 aa	Known RBP	28.8	■■■□□ 2.2
PROCA1-208	ENST00000579650	SP8	Q8IXZ3	490 aa		28.79	■■■□□ 2.2
PROCA1-208	ENST00000579650	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.79	■■■□□ 2.2
PROCA1-208	ENST00000579650	UTY	O14607	1347 aa		28.78	■■■□□ 2.2
PROCA1-208	ENST00000579650	TMC4	Q7Z404	712 aa		28.78	■■■□□ 2.2
PROCA1-208	ENST00000579650	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.78	■■■□□ 2.2
PROCA1-208	ENST00000579650	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.78	■■■□□ 2.2
PROCA1-208	ENST00000579650	RTL9	Q8NET4	1388 aa		28.77	■■■□□ 2.2
PROCA1-208	ENST00000579650	CSF1R	P07333	972 aa		28.77	■■■□□ 2.2
PROCA1-208	ENST00000579650	RPS8	P62241	208 aa	Known RBP	28.77	■■■□□ 2.2
PROCA1-208	ENST00000579650	GRIPAP1	Q4V328	841 aa		28.77	■■■□□ 2.2
PROCA1-208	ENST00000579650	PSMD1	Q99460	953 aa		28.77	■■■□□ 2.2
PROCA1-208	ENST00000579650	FOXO4	P98177	505 aa		28.76	■■■□□ 2.19
PROCA1-208	ENST00000579650	GREM2	Q9H772	168 aa		28.76	■■■□□ 2.19
PROCA1-208	ENST00000579650	MYH3	P11055	1940 aa		28.76	■■■□□ 2.19
PROCA1-208	ENST00000579650	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.74	■■■□□ 2.19
PROCA1-208	ENST00000579650	EPHA10	Q5JZY3	1008 aa		28.74	■■■□□ 2.19
PROCA1-208	ENST00000579650	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.74	■■■□□ 2.19
PROCA1-208	ENST00000579650	LRRC37A	A6NMS7	1700 aa		28.73	■■■□□ 2.19
PROCA1-208	ENST00000579650	IPO8	O15397	1037 aa	Known RBP	28.73	■■■□□ 2.19
PROCA1-208	ENST00000579650	CCT4	P50991	539 aa	Known RBP	28.73	■■■□□ 2.19
PROCA1-208	ENST00000579650	USP44	Q9H0E7	712 aa		28.73	■■■□□ 2.19
PROCA1-208	ENST00000579650	CCDC88A	Q3V6T2	1871 aa		28.72	■■■□□ 2.19
PROCA1-208	ENST00000579650	TRIM27	P14373	513 aa		28.72	■■■□□ 2.19
PROCA1-208	ENST00000579650	KAZALD1	Q96I82	304 aa		28.72	■■■□□ 2.19
PROCA1-208	ENST00000579650	SUCLG2	Q96I99	432 aa		28.72	■■■□□ 2.19
PROCA1-208	ENST00000579650	TMX4	Q9H1E5	349 aa	Predicted RBP	28.72	■■■□□ 2.19
PROCA1-208	ENST00000579650	FAM161A	Q3B820	660 aa		28.71	■■■□□ 2.19
PROCA1-208	ENST00000579650	ATF7IP	Q6VMQ6	1270 aa		28.71	■■■□□ 2.19
PROCA1-208	ENST00000579650	FRAT1	Q92837	279 aa	Predicted RBP	28.71	■■■□□ 2.19
PROCA1-208	ENST00000579650	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.71	■■■□□ 2.19
PROCA1-208	ENST00000579650	TNN	Q9UQP3	1299 aa		28.71	■■■□□ 2.19
PROCA1-208	ENST00000579650	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.7	■■■□□ 2.19
PROCA1-208	ENST00000579650	ANKRD18A	Q8IVF6	992 aa		28.7	■■■□□ 2.18
PROCA1-208	ENST00000579650	MPND	Q8N594	471 aa		28.7	■■■□□ 2.18
PROCA1-208	ENST00000579650	CDC5L	Q99459	802 aa	Known RBP	28.7	■■■□□ 2.18
PROCA1-208	ENST00000579650	ITGA6	P23229	1130 aa		28.69	■■■□□ 2.18
PROCA1-208	ENST00000579650	IARS	P41252	1262 aa	Known RBP	28.69	■■■□□ 2.18
PROCA1-208	ENST00000579650	DICER1	Q9UPY3	1922 aa	Known RBP	28.69	■■■□□ 2.18
PROCA1-208	ENST00000579650	INTS3	Q68E01	1043 aa	Known RBP	28.68	■■■□□ 2.18
PROCA1-208	ENST00000579650	LMBR1L	Q6UX01	489 aa		28.68	■■■□□ 2.18
PROCA1-208	ENST00000579650	DPP8	Q6V1X1	898 aa	Predicted RBP	28.68	■■■□□ 2.18
PROCA1-208	ENST00000579650	ZKSCAN2	Q63HK3	967 aa		28.67	■■■□□ 2.18
PROCA1-208	ENST00000579650	DUOX1	Q9NRD9	1551 aa		28.67	■■■□□ 2.18
PROCA1-208	ENST00000579650	TIAM2	Q8IVF5	1701 aa		28.66	■■■□□ 2.18
PROCA1-208	ENST00000579650	GPSM2	P81274	684 aa		28.66	■■■□□ 2.18
PROCA1-208	ENST00000579650	BSDC1	Q9NW68	430 aa	Predicted RBP	28.66	■■■□□ 2.18
PROCA1-208	ENST00000579650	COL4A5	P29400	1685 aa		28.64	■■■□□ 2.18
PROCA1-208	ENST00000579650	LTBP1	Q14766	1721 aa		28.64	■■■□□ 2.18
PROCA1-208	ENST00000579650	RABL6	Q3YEC7	729 aa	Predicted RBP	28.64	■■■□□ 2.18
PROCA1-208	ENST00000579650	ANKRD44	Q8N8A2	993 aa		28.64	■■■□□ 2.18
PROCA1-208	ENST00000579650	SUPT20H	Q8NEM7	779 aa		28.64	■■■□□ 2.18
PROCA1-208	ENST00000579650	BICC1	Q9H694	974 aa	Known RBP	28.64	■■■□□ 2.18
PROCA1-208	ENST00000579650	ANKRD18B	A2A2Z9	1011 aa		28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	ZNF526	Q8TF50	670 aa	Predicted RBP	28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	CLUAP1	Q96AJ1	413 aa		28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	YTHDC1	Q96MU7	727 aa	Known RBP	28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	VPS33B	Q9H267	617 aa		28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	PODXL2	Q9NZ53	605 aa		28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	CHMP3	Q9Y3E7	222 aa		28.63	■■■□□ 2.17
PROCA1-208	ENST00000579650	IGHMBP2	P38935	993 aa	Known RBP	28.62	■■■□□ 2.17
PROCA1-208	ENST00000579650	IFIT5	Q13325	482 aa	Known RBP	28.62	■■■□□ 2.17
PROCA1-208	ENST00000579650	POLL	Q9UGP5	575 aa		28.62	■■■□□ 2.17
PROCA1-208	ENST00000579650	MINPP1	Q9UNW1	487 aa		28.61	■■■□□ 2.17
PROCA1-208	ENST00000579650	GLTPD2	A6NH11	291 aa		28.6	■■■□□ 2.17
PROCA1-208	ENST00000579650	PPIP5K2	O43314	1243 aa		28.6	■■■□□ 2.17
PROCA1-208	ENST00000579650	AOC3	Q16853	763 aa		28.6	■■■□□ 2.17
PROCA1-208	ENST00000579650	LARGE2	Q8N3Y3	721 aa		28.6	■■■□□ 2.17
PROCA1-208	ENST00000579650	MEIS3	Q99687	375 aa		28.6	■■■□□ 2.17
PROCA1-208	ENST00000579650	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.6	■■■□□ 2.17
PROCA1-208	ENST00000579650	RCAN3	Q9UKA8	241 aa		28.6	■■■□□ 2.17
PROCA1-208	ENST00000579650	FZD9	O00144	591 aa		28.59	■■■□□ 2.17
PROCA1-208	ENST00000579650	KIAA2012	Q0VF49	1180 aa		28.59	■■■□□ 2.17
PROCA1-208	ENST00000579650	TBC1D16	Q8TBP0	767 aa		28.59	■■■□□ 2.17
PROCA1-208	ENST00000579650	SPEF2	Q9C093	1822 aa		28.58	■■■□□ 2.17
PROCA1-208	ENST00000579650	UBTFL1	P0CB47	393 aa	Predicted RBP	28.58	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms