RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 USP44Q9H0E7 712 aa22.5■■□□□ 1.19
MSI2-210ENST00000579505 YBX3P16989 372 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■■■■□ 21.3
MSI2-210ENST00000579505 ALDH1B1P30837 517 aa22.49■■□□□ 1.19
MSI2-210ENST00000579505 CTSWP56202 376 aa22.49■■□□□ 1.19
MSI2-210ENST00000579505 TMX4Q9H1E5 349 aaPredicted RBP22.49■■□□□ 1.19
MSI2-210ENST00000579505 CENPBP07199 599 aaPredicted RBP22.48■■□□□ 1.19
MSI2-210ENST00000579505 GNAI3P08754 354 aa22.48■■□□□ 1.19
MSI2-210ENST00000579505 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
MSI2-210ENST00000579505 WWC3Q9ULE0 1092 aa22.48■■□□□ 1.19
MSI2-210ENST00000579505 BCS1LQ9Y276 419 aa22.48■■□□□ 1.19
MSI2-210ENST00000579505 RTL9Q8NET4 1388 aa22.48■■□□□ 1.19
MSI2-210ENST00000579505 RLBP1P12271 317 aa22.47■■□□□ 1.19
MSI2-210ENST00000579505 PDE3AQ14432 1141 aa22.47■■□□□ 1.19
MSI2-210ENST00000579505 GPR162Q16538 588 aa22.47■■□□□ 1.19
MSI2-210ENST00000579505 CCDC152Q4G0S7 254 aa22.47■■□□□ 1.19
MSI2-210ENST00000579505 PRPF40BQ6NWY9 871 aaKnown RBP22.47■■□□□ 1.19
MSI2-210ENST00000579505 DDX46Q7L014 1031 aaKnown RBP22.47■■□□□ 1.19
MSI2-210ENST00000579505 TTLL11Q8NHH1 800 aa22.47■■□□□ 1.19
MSI2-210ENST00000579505 COL4A1P02462 1669 aa22.46■■□□□ 1.19
MSI2-210ENST00000579505 CSF1RP07333 972 aa22.46■■□□□ 1.19
MSI2-210ENST00000579505 FOXO4P98177 505 aa22.46■■□□□ 1.19
MSI2-210ENST00000579505 LRRC37AA6NMS7 1700 aa22.45■■□□□ 1.19
MSI2-210ENST00000579505 FER1L6Q2WGJ9 1857 aa22.45■■□□□ 1.19
MSI2-210ENST00000579505 PLIN1O60240 522 aa22.45■■□□□ 1.18
MSI2-210ENST00000579505 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
MSI2-210ENST00000579505 KAZALD1Q96I82 304 aa22.45■■□□□ 1.18
MSI2-210ENST00000579505 SUCLG2Q96I99 432 aa22.45■■□□□ 1.18
MSI2-210ENST00000579505 SPEF2Q9C093 1822 aa22.45■■□□□ 1.18
MSI2-210ENST00000579505 UBTFL1P0CB47 393 aaPredicted RBP22.44■■□□□ 1.18
MSI2-210ENST00000579505 GRAPQ13588 217 aa22.44■■□□□ 1.18
MSI2-210ENST00000579505 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
MSI2-210ENST00000579505 GRAPLQ8TC17 118 aaPredicted RBP22.44■■□□□ 1.18
MSI2-210ENST00000579505 UTRNP46939 3433 aa22.44■■□□□ 1.18
MSI2-210ENST00000579505 GRIN3BO60391 1043 aa22.43■■□□□ 1.18
MSI2-210ENST00000579505 EPHA10Q5JZY3 1008 aa22.43■■□□□ 1.18
MSI2-210ENST00000579505 PANK1Q8TE04 598 aa22.43■■□□□ 1.18
MSI2-210ENST00000579505 C7orf43Q8WVR3 580 aa22.43■■□□□ 1.18
MSI2-210ENST00000579505 MEIS3Q99687 375 aa22.43■■□□□ 1.18
MSI2-210ENST00000579505 BBOX1O75936 387 aa22.42■■□□□ 1.18
MSI2-210ENST00000579505 RABL6Q3YEC7 729 aaPredicted RBP22.42■■□□□ 1.18
MSI2-210ENST00000579505 GREM2Q9H772 168 aa22.42■■□□□ 1.18
MSI2-210ENST00000579505 DDX19BQ9UMR2 479 aa22.42■■□□□ 1.18
MSI2-210ENST00000579505 PPEF1O14829 653 aaPredicted RBP22.41■■□□□ 1.18
MSI2-210ENST00000579505 CCDC85AQ96PX6 553 aaPredicted RBP22.41■■□□□ 1.18
MSI2-210ENST00000579505 SEC31BQ9NQW1 1179 aa22.41■■□□□ 1.18
MSI2-210ENST00000579505 C21orf2O43822 256 aa22.4■■□□□ 1.18
MSI2-210ENST00000579505 RRP1P56182 461 aaKnown RBP22.4■■□□□ 1.18
MSI2-210ENST00000579505 FAM161AQ3B820 660 aa22.4■■□□□ 1.18
MSI2-210ENST00000579505 SOGA3Q5TF21 947 aa22.4■■□□□ 1.18
MSI2-210ENST00000579505 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
MSI2-210ENST00000579505 TMC4Q7Z404 712 aa22.4■■□□□ 1.18
MSI2-210ENST00000579505 CELF1Q92879 486 aaKnown RBP22.4■■□□□ 1.18
MSI2-210ENST00000579505 BICC1Q9H694 974 aaKnown RBP22.4■■□□□ 1.18
MSI2-210ENST00000579505 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
MSI2-210ENST00000579505 GRIPAP1Q4V328 841 aa22.39■■□□□ 1.17
MSI2-210ENST00000579505 ANKRD44Q8N8A2 993 aa22.39■■□□□ 1.17
MSI2-210ENST00000579505 CDC5LQ99459 802 aaKnown RBP22.39■■□□□ 1.17
MSI2-210ENST00000579505 CHD4Q14839 1912 aa22.39■■□□□ 1.17
MSI2-210ENST00000579505 SBF1O95248 1867 aa22.39■■□□□ 1.17
MSI2-210ENST00000579505 ITGA6P23229 1130 aa22.38■■□□□ 1.17
MSI2-210ENST00000579505 RPS8P62241 208 aaKnown RBP22.38■■□□□ 1.17
MSI2-210ENST00000579505 MVPQ14764 893 aaKnown RBP22.38■■□□□ 1.17
MSI2-210ENST00000579505 CC2D2BQ6DHV5 1058 aa22.38■■□□□ 1.17
MSI2-210ENST00000579505 ATP6V0A2Q9Y487 856 aa22.38■■□□□ 1.17
MSI2-210ENST00000579505 LTBP1Q14766 1721 aa22.37■■□□□ 1.17
MSI2-210ENST00000579505 ZBTB7BO15156 539 aaPredicted RBP22.37■■□□□ 1.17
MSI2-210ENST00000579505 GNAI2P04899 355 aa22.37■■□□□ 1.17
MSI2-210ENST00000579505 CCDC57Q2TAC2 916 aa22.37■■□□□ 1.17
MSI2-210ENST00000579505 C20orf194Q5TEA3 1177 aa22.37■■□□□ 1.17
MSI2-210ENST00000579505 SP8Q8IXZ3 490 aa22.37■■□□□ 1.17
MSI2-210ENST00000579505 ZNF219Q9P2Y4 722 aaPredicted RBP22.37■■□□□ 1.17
MSI2-210ENST00000579505 CHMP3Q9Y3E7 222 aa22.37■■□□□ 1.17
MSI2-210ENST00000579505 LRRFIP2Q9Y608 721 aaKnown RBP22.37■■□□□ 1.17
MSI2-210ENST00000579505 ANKRD18BA2A2Z9 1011 aa22.36■■□□□ 1.17
MSI2-210ENST00000579505 IFIT5Q13325 482 aaKnown RBP22.36■■□□□ 1.17
MSI2-210ENST00000579505 CCDC93Q567U6 631 aa22.36■■□□□ 1.17
MSI2-210ENST00000579505 TAF7LQ5H9L4 462 aa22.36■■□□□ 1.17
MSI2-210ENST00000579505 ANKRD18AQ8IVF6 992 aa22.36■■□□□ 1.17
MSI2-210ENST00000579505 COG6Q9Y2V7 657 aa22.36■■□□□ 1.17
MSI2-210ENST00000579505 CCDC88AQ3V6T2 1871 aa22.36■■□□□ 1.17
MSI2-210ENST00000579505 A0A1B0GUL6 1792 aa22.35■■□□□ 1.17
MSI2-210ENST00000579505 IGHMBP2P38935 993 aaKnown RBP22.34■■□□□ 1.17
MSI2-210ENST00000579505 OLFM4Q6UX06 510 aa22.34■■□□□ 1.17
MSI2-210ENST00000579505 ARHGAP27Q6ZUM4 889 aa22.34■■□□□ 1.17
MSI2-210ENST00000579505 RTKN2Q8IZC4 609 aa22.34■■□□□ 1.17
MSI2-210ENST00000579505 LTBP3Q9NS15 1303 aa22.33■■□□□ 1.17
MSI2-210ENST00000579505 DICER1Q9UPY3 1922 aaKnown RBP22.33■■□□□ 1.17
MSI2-210ENST00000579505 NFKBIEO00221 500 aa22.33■■□□□ 1.17
MSI2-210ENST00000579505 AAMPQ13685 434 aa22.33■■□□□ 1.17
MSI2-210ENST00000579505 SLC51AQ86UW1 340 aa22.33■■□□□ 1.17
MSI2-210ENST00000579505 BSDC1Q9NW68 430 aaPredicted RBP22.33■■□□□ 1.17
MSI2-210ENST00000579505 MTX1Q13505 466 aa22.32■■□□□ 1.16
MSI2-210ENST00000579505 MPHOSPH8Q99549 860 aa22.32■■□□□ 1.16
MSI2-210ENST00000579505 SUPT16HQ9Y5B9 1047 aaKnown RBP22.32■■□□□ 1.16
MSI2-210ENST00000579505 DUOX1Q9NRD9 1551 aa22.32■■□□□ 1.16
MSI2-210ENST00000579505 PSMD1Q99460 953 aa22.3■■□□□ 1.16
MSI2-210ENST00000579505 TAOK3Q9H2K8 898 aa22.3■■□□□ 1.16
MSI2-210ENST00000579505 RFX5P48382 616 aaPredicted RBP22.29■■□□□ 1.16
MSI2-210ENST00000579505 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
MSI2-210ENST00000579505 ZBTB40Q9NUA8 1239 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms