RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 LMOD3Q0VAK6 560 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 GRM1Q13255 1194 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 TCIRG1Q13488 830 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 GRAPQ13588 217 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 TNIP1Q15025 636 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 DDX46Q7L014 1031 aaKnown RBP11.22□□□□□ -0.61
CASC3-206ENST00000579238 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 SAPCD2Q86UD0 394 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
CASC3-206ENST00000579238 XAGE3Q8WTP9 111 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
CASC3-206ENST00000579238 HHIPL1Q96JK4 782 aa11.22□□□□□ -0.61
CASC3-206ENST00000579238 SH3TC1Q8TE82 1336 aa11.21□□□□□ -0.61
CASC3-206ENST00000579238 RAD17O75943 681 aa11.21□□□□□ -0.61
CASC3-206ENST00000579238 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
CASC3-206ENST00000579238 AIMP1Q12904 312 aaKnown RBP11.21□□□□□ -0.61
CASC3-206ENST00000579238 TMC4Q7Z404 712 aa11.21□□□□□ -0.61
CASC3-206ENST00000579238 BCL2L13Q9BXK5 485 aa11.21□□□□□ -0.61
CASC3-206ENST00000579238 GLIS2Q9BZE0 524 aaPredicted RBP11.21□□□□□ -0.61
CASC3-206ENST00000579238 TRMT112Q9UI30 125 aaKnown RBP11.21□□□□□ -0.61
CASC3-206ENST00000579238 CA12O43570 354 aa11.2□□□□□ -0.62
CASC3-206ENST00000579238 AOC2O75106 756 aa11.2□□□□□ -0.62
CASC3-206ENST00000579238 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
CASC3-206ENST00000579238 ANKRD36CQ5JPF3 1778 aa11.2□□□□□ -0.62
CASC3-206ENST00000579238 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
CASC3-206ENST00000579238 H7C1D1 291 aa11.19□□□□□ -0.62
CASC3-206ENST00000579238 HIRAP54198 1017 aaPredicted RBP11.19□□□□□ -0.62
CASC3-206ENST00000579238 CDC37L1Q7L3B6 337 aa11.19□□□□□ -0.62
CASC3-206ENST00000579238 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
CASC3-206ENST00000579238 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
CASC3-206ENST00000579238 LAMB2P55268 1798 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 CHL1O00533 1208 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
CASC3-206ENST00000579238 RALBP1Q15311 655 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 PLBD2Q8NHP8 589 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 DPF2Q92785 391 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 ZNF408Q9H9D4 720 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
CASC3-206ENST00000579238 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 SHTN1A0MZ66 631 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 CCDC85CA6NKD9 419 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 HOXB7P09629 217 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 SF3B3Q15393 1217 aaKnown RBP11.17□□□□□ -0.62
CASC3-206ENST00000579238 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 ISCA1Q9BUE6 129 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 CHPF2Q9P2E5 772 aa11.17□□□□□ -0.62
CASC3-206ENST00000579238 PSMD14O00487 310 aa11.16□□□□□ -0.62
CASC3-206ENST00000579238 RGS19P49795 217 aa11.16□□□□□ -0.62
CASC3-206ENST00000579238 NOGQ13253 232 aa11.16□□□□□ -0.62
CASC3-206ENST00000579238 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
CASC3-206ENST00000579238 HDGFL1Q5TGJ6 251 aa11.16□□□□□ -0.62
CASC3-206ENST00000579238 ANKRD13DQ6ZTN6 518 aa11.16□□□□□ -0.62
CASC3-206ENST00000579238 USP48Q86UV5 1035 aa11.16□□□□□ -0.62
CASC3-206ENST00000579238 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
CASC3-206ENST00000579238 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
CASC3-206ENST00000579238 LRRC37AA6NMS7 1700 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 RPS12P25398 132 aaKnown RBP11.15□□□□□ -0.62
CASC3-206ENST00000579238 HUNKP57058 714 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 CELF1Q92879 486 aaKnown RBP11.15□□□□□ -0.62
CASC3-206ENST00000579238 ZNF428Q96B54 188 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 FAM89AQ96GI7 184 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 DBNDD1Q9H9R9 158 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 DBF4Q9UBU7 674 aaPredicted RBP11.15□□□□□ -0.62
CASC3-206ENST00000579238 POLLQ9UGP5 575 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
CASC3-206ENST00000579238 LAS1LQ9Y4W2 734 aaKnown RBP11.15□□□□□ -0.62
CASC3-206ENST00000579238 TAF1P21675 1872 aa11.15□□□□□ -0.63
CASC3-206ENST00000579238 ATP5J2-PTCD1G3V325 749 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 C6orf229H3BNL8 230 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 ECE2O60344 883 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 GPSM2P81274 684 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 MLLT1Q03111 559 aaPredicted RBP11.14□□□□□ -0.63
CASC3-206ENST00000579238 TRIM28Q13263 835 aaKnown RBP11.14□□□□□ -0.63
CASC3-206ENST00000579238 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 CCDC146Q8IYE0 955 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 RUNDC1Q96C34 613 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 EYA3Q99504 573 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 MCOLN1Q9GZU1 580 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 HYPKQ9NX55 129 aa11.14□□□□□ -0.63
CASC3-206ENST00000579238 MYBBP1AQ9BQG0 1328 aaKnown RBP11.13□□□□□ -0.63
CASC3-206ENST00000579238 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
CASC3-206ENST00000579238 IRS4O14654 1257 aaPredicted RBP11.13□□□□□ -0.63
CASC3-206ENST00000579238 RPS8P62241 208 aaKnown RBP11.13□□□□□ -0.63
CASC3-206ENST00000579238 TBC1D10BQ4KMP7 808 aaPredicted RBP11.13□□□□□ -0.63
CASC3-206ENST00000579238 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
CASC3-206ENST00000579238 GBA2Q9HCG7 927 aaPredicted RBP11.13□□□□□ -0.63
CASC3-206ENST00000579238 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
CASC3-206ENST00000579238 SLC34A2O95436 690 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 EGFRP00533 1210 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 HSP90B1P14625 803 aaKnown RBP11.12□□□□□ -0.63
CASC3-206ENST00000579238 DOK7Q18PE1 504 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
CASC3-206ENST00000579238 DUSP27Q5VZP5 1158 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 RGMBQ6NW40 437 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 DLK2Q6UY11 383 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms