RNA–Protein interactions for RNA: ENST00000579148.1

MIR3940-201, Transcript of microRNA 3940, humanhuman

BASIC

Gene MIR3940, Length 102 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3940-201ENST00000579148 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
MIR3940-201ENST00000579148 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
MIR3940-201ENST00000579148 ANKRD18BA2A2Z9 1011 aa17.11■□□□□ 0.33
MIR3940-201ENST00000579148 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
MIR3940-201ENST00000579148 SF3B3Q15393 1217 aaKnown RBP17.11■□□□□ 0.33
MIR3940-201ENST00000579148 ERFEQ4G0M1 354 aa17.11■□□□□ 0.33
MIR3940-201ENST00000579148 PA2G4Q9UQ80 394 aaKnown RBP17.11■□□□□ 0.33
MIR3940-201ENST00000579148 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
MIR3940-201ENST00000579148 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
MIR3940-201ENST00000579148 FAM161AQ3B820 660 aa17.1■□□□□ 0.33
MIR3940-201ENST00000579148 DEFB132Q7Z7B7 95 aa17.1■□□□□ 0.33
MIR3940-201ENST00000579148 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
MIR3940-201ENST00000579148 EYA2O00167 538 aa17.09■□□□□ 0.33
MIR3940-201ENST00000579148 APBB1O00213 710 aa17.09■□□□□ 0.33
MIR3940-201ENST00000579148 MSH5O43196 834 aa17.09■□□□□ 0.33
MIR3940-201ENST00000579148 ITGA6P23229 1130 aa17.09■□□□□ 0.33
MIR3940-201ENST00000579148 TAF7LQ5H9L4 462 aa17.09■□□□□ 0.33
MIR3940-201ENST00000579148 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
MIR3940-201ENST00000579148 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
MIR3940-201ENST00000579148 GREM2Q9H772 168 aa17.09■□□□□ 0.33
MIR3940-201ENST00000579148 ANO8Q9HCE9 1232 aaPredicted RBP17.09■□□□□ 0.33
MIR3940-201ENST00000579148 LAMB2P55268 1798 aa17.08■□□□□ 0.33
MIR3940-201ENST00000579148 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.32
MIR3940-201ENST00000579148 SASH1O94885 1247 aa17.08■□□□□ 0.32
MIR3940-201ENST00000579148 ST5P78524 1137 aa17.08■□□□□ 0.32
MIR3940-201ENST00000579148 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
MIR3940-201ENST00000579148 NLRP3Q96P20 1036 aa17.08■□□□□ 0.32
MIR3940-201ENST00000579148 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
MIR3940-201ENST00000579148 AOX1Q06278 1338 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
MIR3940-201ENST00000579148 NPHP1O15259 732 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 SERPINB2P05120 415 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 PLEKHM2Q8IWE5 1019 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 SIL1Q9H173 461 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 GPR108Q9NPR9 543 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
MIR3940-201ENST00000579148 ABCC12Q96J65 1359 aa17.06■□□□□ 0.32
MIR3940-201ENST00000579148 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
MIR3940-201ENST00000579148 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
MIR3940-201ENST00000579148 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
MIR3940-201ENST00000579148 SALL3Q9BXA9 1300 aa17.05■□□□□ 0.32
MIR3940-201ENST00000579148 DDR1Q08345 913 aa17.05■□□□□ 0.32
MIR3940-201ENST00000579148 BMP2KLQ5H9B9 411 aa17.05■□□□□ 0.32
MIR3940-201ENST00000579148 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
MIR3940-201ENST00000579148 SLC16A10Q8TF71 515 aa17.05■□□□□ 0.32
MIR3940-201ENST00000579148 IL1RAPL2Q9NP60 686 aa17.05■□□□□ 0.32
MIR3940-201ENST00000579148 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
MIR3940-201ENST00000579148 IFIT2P09913 472 aaKnown RBP17.04■□□□□ 0.32
MIR3940-201ENST00000579148 MX1P20591 662 aa17.04■□□□□ 0.32
MIR3940-201ENST00000579148 LDHAL6AQ6ZMR3 332 aa17.04■□□□□ 0.32
MIR3940-201ENST00000579148 C16orf71Q8IYS4 520 aaPredicted RBP17.04■□□□□ 0.32
MIR3940-201ENST00000579148 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
MIR3940-201ENST00000579148 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
MIR3940-201ENST00000579148 ZNF594Q96JF6 807 aaPredicted RBP17.04■□□□□ 0.32
MIR3940-201ENST00000579148 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
MIR3940-201ENST00000579148 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
MIR3940-201ENST00000579148 LRP5O75197 1615 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 TTC41PQ6P2S7 1318 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 MROH5Q6ZUA9 1318 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
MIR3940-201ENST00000579148 PDE1AP54750 535 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 TFCP2Q12800 502 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 AKAP2Q9Y2D5 859 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 RIPOR2Q9Y4F9 1068 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
MIR3940-201ENST00000579148 KLRG2A4D1S0 409 aaPredicted RBP17.02■□□□□ 0.32
MIR3940-201ENST00000579148 LRRC24Q50LG9 513 aa17.02■□□□□ 0.32
MIR3940-201ENST00000579148 AACSQ86V21 672 aa17.02■□□□□ 0.32
MIR3940-201ENST00000579148 MPHOSPH8Q99549 860 aa17.02■□□□□ 0.32
MIR3940-201ENST00000579148 CNNM1Q9NRU3 951 aa17.02■□□□□ 0.32
MIR3940-201ENST00000579148 MMP10P09238 476 aa17.01■□□□□ 0.31
MIR3940-201ENST00000579148 TNNI3KQ59H18 835 aa17.01■□□□□ 0.31
MIR3940-201ENST00000579148 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
MIR3940-201ENST00000579148 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
MIR3940-201ENST00000579148 ANKRD18AQ8IVF6 992 aa17.01■□□□□ 0.31
MIR3940-201ENST00000579148 OTUD7AQ8TE49 926 aaPredicted RBP17.01■□□□□ 0.31
MIR3940-201ENST00000579148 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
MIR3940-201ENST00000579148 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
MIR3940-201ENST00000579148 FPGT-TNNI3KV9GXZ4 949 aa17.01■□□□□ 0.31
MIR3940-201ENST00000579148 MYH3P11055 1940 aa17■□□□□ 0.31
MIR3940-201ENST00000579148 ERC2O15083 957 aa17■□□□□ 0.31
MIR3940-201ENST00000579148 CRY2Q49AN0 593 aa17■□□□□ 0.31
MIR3940-201ENST00000579148 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
MIR3940-201ENST00000579148 PUS3Q9BZE2 481 aaKnown RBP17■□□□□ 0.31
MIR3940-201ENST00000579148 SEC31BQ9NQW1 1179 aa17■□□□□ 0.31
MIR3940-201ENST00000579148 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
MIR3940-201ENST00000579148 BSDC1Q9NW68 430 aaPredicted RBP17■□□□□ 0.31
MIR3940-201ENST00000579148 METTL24Q5JXM2 366 aa16.99■□□□□ 0.31
MIR3940-201ENST00000579148 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
MIR3940-201ENST00000579148 GLRX3O76003 335 aaKnown RBP16.98■□□□□ 0.31
MIR3940-201ENST00000579148 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
MIR3940-201ENST00000579148 RPS8P62241 208 aaKnown RBP16.98■□□□□ 0.31
MIR3940-201ENST00000579148 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
MIR3940-201ENST00000579148 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
MIR3940-201ENST00000579148 ZNF609O15014 1411 aa16.97■□□□□ 0.31
MIR3940-201ENST00000579148 EIF5BO60841 1220 aaKnown RBP16.97■□□□□ 0.31
MIR3940-201ENST00000579148 PDE8BO95263 885 aa16.97■□□□□ 0.31
MIR3940-201ENST00000579148 PDE6BP35913 854 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms