RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 TTLL11Q8NHH1 800 aa14.52□□□□□ -0.09
ERBB2-208ENST00000578630 GRAPLQ8TC17 118 aaPredicted RBP14.52□□□□□ -0.09
ERBB2-208ENST00000578630 PPEF1O14829 653 aaPredicted RBP14.51□□□□□ -0.09
ERBB2-208ENST00000578630 RPS8P62241 208 aaKnown RBP14.51□□□□□ -0.09
ERBB2-208ENST00000578630 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
ERBB2-208ENST00000578630 SP8Q8IXZ3 490 aa14.51□□□□□ -0.09
ERBB2-208ENST00000578630 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
ERBB2-208ENST00000578630 DZIP1LQ8IYY4 767 aaKnown RBP14.51□□□□□ -0.09
ERBB2-208ENST00000578630 C7orf43Q8WVR3 580 aa14.51□□□□□ -0.09
ERBB2-208ENST00000578630 CLUAP1Q96AJ1 413 aa14.51□□□□□ -0.09
ERBB2-208ENST00000578630 CCDC85AQ96PX6 553 aaPredicted RBP14.51□□□□□ -0.09
ERBB2-208ENST00000578630 CDC5LQ99459 802 aaKnown RBP14.51□□□□□ -0.09
ERBB2-208ENST00000578630 USP44Q9H0E7 712 aa14.51□□□□□ -0.09
ERBB2-208ENST00000578630 ANKRD31Q8N7Z5 1873 aa14.5□□□□□ -0.09
ERBB2-208ENST00000578630 UTYO14607 1347 aa14.5□□□□□ -0.09
ERBB2-208ENST00000578630 ABCC4O15439 1325 aa14.5□□□□□ -0.09
ERBB2-208ENST00000578630 CSF1RP07333 972 aa14.5□□□□□ -0.09
ERBB2-208ENST00000578630 NBPF7P0C2Y1 421 aaPredicted RBP14.5□□□□□ -0.09
ERBB2-208ENST00000578630 ATP6V0A2Q9Y487 856 aa14.5□□□□□ -0.09
ERBB2-208ENST00000578630 GNAI3P08754 354 aa14.49□□□□□ -0.09
ERBB2-208ENST00000578630 ANKRD18AQ8IVF6 992 aa14.49□□□□□ -0.09
ERBB2-208ENST00000578630 CHMP3Q9Y3E7 222 aa14.49□□□□□ -0.09
ERBB2-208ENST00000578630 ANKRD18BA2A2Z9 1011 aa14.48□□□□□ -0.09
ERBB2-208ENST00000578630 UBTFL1P0CB47 393 aaPredicted RBP14.48□□□□□ -0.09
ERBB2-208ENST00000578630 IGHMBP2P38935 993 aaKnown RBP14.48□□□□□ -0.09
ERBB2-208ENST00000578630 FOXO4P98177 505 aa14.48□□□□□ -0.09
ERBB2-208ENST00000578630 IFIT5Q13325 482 aaKnown RBP14.48□□□□□ -0.09
ERBB2-208ENST00000578630 CCDC57Q2TAC2 916 aa14.48□□□□□ -0.09
ERBB2-208ENST00000578630 LMBR1LQ6UX01 489 aa14.48□□□□□ -0.09
ERBB2-208ENST00000578630 CELF1Q92879 486 aaKnown RBP14.48□□□□□ -0.09
ERBB2-208ENST00000578630 TAOK3Q9H2K8 898 aa14.48□□□□□ -0.09
ERBB2-208ENST00000578630 GREM2Q9H772 168 aa14.48□□□□□ -0.09
ERBB2-208ENST00000578630 SEC31BQ9NQW1 1179 aa14.48□□□□□ -0.09
ERBB2-208ENST00000578630 KIAA1551Q9HCM1 1747 aa14.47□□□□□ -0.09
ERBB2-208ENST00000578630 ITGA6P23229 1130 aa14.47□□□□□ -0.09
ERBB2-208ENST00000578630 MPNDQ8N594 471 aa14.47□□□□□ -0.09
ERBB2-208ENST00000578630 TMEM57Q8N5G2 664 aa14.47□□□□□ -0.09
ERBB2-208ENST00000578630 SUCLG2Q96I99 432 aa14.47□□□□□ -0.09
ERBB2-208ENST00000578630 MPHOSPH8Q99549 860 aa14.47□□□□□ -0.09
ERBB2-208ENST00000578630 LMNB1P20700 586 aa14.46□□□□□ -0.09
ERBB2-208ENST00000578630 FKBP4Q02790 459 aaKnown RBP eCLIP14.46□□□□□ -0.09
ERBB2-208ENST00000578630 TAF7LQ5H9L4 462 aa14.46□□□□□ -0.09
ERBB2-208ENST00000578630 SUPT20HQ8NEM7 779 aa14.46□□□□□ -0.09
ERBB2-208ENST00000578630 BSDC1Q9NW68 430 aaPredicted RBP14.46□□□□□ -0.09
ERBB2-208ENST00000578630 RTL9Q8NET4 1388 aa14.46□□□□□ -0.1
ERBB2-208ENST00000578630 YY1P25490 414 aa14.45□□□□□ -0.1
ERBB2-208ENST00000578630 EPHA10Q5JZY3 1008 aa14.45□□□□□ -0.1
ERBB2-208ENST00000578630 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
ERBB2-208ENST00000578630 DPP8Q6V1X1 898 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-208ENST00000578630 PSMD1Q99460 953 aa14.45□□□□□ -0.1
ERBB2-208ENST00000578630 CHMP4BQ9H444 224 aaKnown RBP14.45□□□□□ -0.1
ERBB2-208ENST00000578630 NSFL1CQ9UNZ2 370 aaKnown RBP14.45□□□□□ -0.1
ERBB2-208ENST00000578630 TNNQ9UQP3 1299 aa14.45□□□□□ -0.1
ERBB2-208ENST00000578630 SLX4Q8IY92 1834 aa14.45□□□□□ -0.1
ERBB2-208ENST00000578630 LTBP3Q9NS15 1303 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 NFKBIEO00221 500 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 FAM161AQ3B820 660 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 ITPRIPQ8IWB1 547 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 KAZALD1Q96I82 304 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 VPS33BQ9H267 617 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
ERBB2-208ENST00000578630 RNF181Q9P0P0 153 aa14.44□□□□□ -0.1
ERBB2-208ENST00000578630 BRCA1P38398 1863 aaKnown RBP14.44□□□□□ -0.1
ERBB2-208ENST00000578630 TNRC6CQ9HCJ0 1690 aaKnown RBP14.43□□□□□ -0.1
ERBB2-208ENST00000578630 PLIN1O60240 522 aa14.43□□□□□ -0.1
ERBB2-208ENST00000578630 GNAI2P04899 355 aa14.43□□□□□ -0.1
ERBB2-208ENST00000578630 RASSF7Q02833 373 aa14.43□□□□□ -0.1
ERBB2-208ENST00000578630 PDE3AQ14432 1141 aa14.43□□□□□ -0.1
ERBB2-208ENST00000578630 RABL6Q3YEC7 729 aaPredicted RBP14.43□□□□□ -0.1
ERBB2-208ENST00000578630 MEIS3Q99687 375 aa14.43□□□□□ -0.1
ERBB2-208ENST00000578630 ANKIB1Q9P2G1 1089 aa14.43□□□□□ -0.1
ERBB2-208ENST00000578630 DLEC1Q9Y238 1755 aa14.42□□□□□ -0.1
ERBB2-208ENST00000578630 COL11A2P13942 1736 aaPredicted RBP14.42□□□□□ -0.1
ERBB2-208ENST00000578630 LDHAL6AQ6ZMR3 332 aa14.42□□□□□ -0.1
ERBB2-208ENST00000578630 PANK1Q8TE04 598 aa14.42□□□□□ -0.1
ERBB2-208ENST00000578630 ANKRD2Q9GZV1 360 aa14.42□□□□□ -0.1
ERBB2-208ENST00000578630 LRRFIP2Q9Y608 721 aaKnown RBP14.42□□□□□ -0.1
ERBB2-208ENST00000578630 ARFGEF1Q9Y6D6 1849 aa14.42□□□□□ -0.1
ERBB2-208ENST00000578630 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
ERBB2-208ENST00000578630 C6orf229H3BNL8 230 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
ERBB2-208ENST00000578630 RLBP1P12271 317 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 ATP2B4P23634 1241 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 IARSP41252 1262 aaKnown RBP14.41□□□□□ -0.1
ERBB2-208ENST00000578630 ANKRD44Q8N8A2 993 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 JDP2Q8WYK2 163 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 EYA3Q99504 573 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 RTFDC1Q9BY42 306 aaPredicted RBP14.41□□□□□ -0.1
ERBB2-208ENST00000578630 ZNF277Q9NRM2 450 aaPredicted RBP14.41□□□□□ -0.1
ERBB2-208ENST00000578630 CNNM1Q9NRU3 951 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 MINPP1Q9UNW1 487 aa14.41□□□□□ -0.1
ERBB2-208ENST00000578630 GOLGB1Q14789 3259 aaKnown RBP14.41□□□□□ -0.1
ERBB2-208ENST00000578630 GPSM2P81274 684 aa14.4□□□□□ -0.1
ERBB2-208ENST00000578630 PODXL2Q9NZ53 605 aa14.4□□□□□ -0.1
ERBB2-208ENST00000578630 GGA1Q9UJY5 639 aa14.4□□□□□ -0.1
ERBB2-208ENST00000578630 DDX19BQ9UMR2 479 aa14.4□□□□□ -0.1
ERBB2-208ENST00000578630 MVPQ14764 893 aaKnown RBP14.39□□□□□ -0.11
ERBB2-208ENST00000578630 WASHC4Q2M389 1173 aa14.39□□□□□ -0.11
ERBB2-208ENST00000578630 DPY19L2Q6NUT2 758 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms