RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 PPEF1O14829 653 aaPredicted RBP19.33■□□□□ 0.68
SLC6A4-204ENST00000578609 GRAPQ13588 217 aa19.33■□□□□ 0.68
SLC6A4-204ENST00000578609 CCDC93Q567U6 631 aa19.33■□□□□ 0.68
SLC6A4-204ENST00000578609 GRAPLQ8TC17 118 aaPredicted RBP19.33■□□□□ 0.68
SLC6A4-204ENST00000578609 LRRC37AA6NMS7 1700 aa19.33■□□□□ 0.68
SLC6A4-204ENST00000578609 UTYO14607 1347 aa19.32■□□□□ 0.68
SLC6A4-204ENST00000578609 MYH3P11055 1940 aa19.32■□□□□ 0.68
SLC6A4-204ENST00000578609 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
SLC6A4-204ENST00000578609 ZNF219Q9P2Y4 722 aaPredicted RBP19.32■□□□□ 0.68
SLC6A4-204ENST00000578609 RASSF7Q02833 373 aa19.31■□□□□ 0.68
SLC6A4-204ENST00000578609 CC2D2BQ6DHV5 1058 aa19.31■□□□□ 0.68
SLC6A4-204ENST00000578609 IPO8O15397 1037 aaKnown RBP19.3■□□□□ 0.68
SLC6A4-204ENST00000578609 BBOX1O75936 387 aa19.3■□□□□ 0.68
SLC6A4-204ENST00000578609 TRIM27P14373 513 aa19.3■□□□□ 0.68
SLC6A4-204ENST00000578609 CCT4P50991 539 aaKnown RBP19.3■□□□□ 0.68
SLC6A4-204ENST00000578609 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
SLC6A4-204ENST00000578609 TTLL11Q8NHH1 800 aa19.3■□□□□ 0.68
SLC6A4-204ENST00000578609 ATP6V0A2Q9Y487 856 aa19.3■□□□□ 0.68
SLC6A4-204ENST00000578609 OLFM4Q6UX06 510 aa19.29■□□□□ 0.68
SLC6A4-204ENST00000578609 ATF7IPQ6VMQ6 1270 aa19.29■□□□□ 0.68
SLC6A4-204ENST00000578609 SLC51AQ86UW1 340 aa19.29■□□□□ 0.68
SLC6A4-204ENST00000578609 CELF1Q92879 486 aaKnown RBP19.29■□□□□ 0.68
SLC6A4-204ENST00000578609 TAOK3Q9H2K8 898 aa19.29■□□□□ 0.68
SLC6A4-204ENST00000578609 C9orf78Q9NZ63 289 aaPredicted RBP19.29■□□□□ 0.68
SLC6A4-204ENST00000578609 CSF1RP07333 972 aa19.28■□□□□ 0.68
SLC6A4-204ENST00000578609 YY1P25490 414 aa19.28■□□□□ 0.68
SLC6A4-204ENST00000578609 PRELPP51888 382 aa19.28■□□□□ 0.68
SLC6A4-204ENST00000578609 GRIPAP1Q4V328 841 aa19.28■□□□□ 0.68
SLC6A4-204ENST00000578609 RTKN2Q8IZC4 609 aa19.28■□□□□ 0.68
SLC6A4-204ENST00000578609 SEC31BQ9NQW1 1179 aa19.28■□□□□ 0.68
SLC6A4-204ENST00000578609 TAF1P21675 1872 aa19.28■□□□□ 0.68
SLC6A4-204ENST00000578609 SBF1O95248 1867 aa19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 NBPF7P0C2Y1 421 aaPredicted RBP19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 FOXO4P98177 505 aa19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 FKBP4Q02790 459 aaKnown RBP eCLIP19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 ZKSCAN2Q63HK3 967 aa19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 INTS3Q68E01 1043 aaKnown RBP19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 SP8Q8IXZ3 490 aa19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 FRAT1Q92837 279 aaPredicted RBP19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 GREM2Q9H772 168 aa19.27■□□□□ 0.68
SLC6A4-204ENST00000578609 LMNB1P20700 586 aa19.26■□□□□ 0.67
SLC6A4-204ENST00000578609 EPHA10Q5JZY3 1008 aa19.26■□□□□ 0.67
SLC6A4-204ENST00000578609 C9orf131Q5VYM1 1079 aa19.26■□□□□ 0.67
SLC6A4-204ENST00000578609 CCDC85AQ96PX6 553 aaPredicted RBP19.26■□□□□ 0.67
SLC6A4-204ENST00000578609 PSMD1Q99460 953 aa19.26■□□□□ 0.67
SLC6A4-204ENST00000578609 USP44Q9H0E7 712 aa19.26■□□□□ 0.67
SLC6A4-204ENST00000578609 DUOX1Q9NRD9 1551 aa19.26■□□□□ 0.67
SLC6A4-204ENST00000578609 LTBP1Q14766 1721 aa19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 TIAM2Q8IVF5 1701 aa19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 RPS8P62241 208 aaKnown RBP19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 FAM161AQ3B820 660 aa19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 KAZALD1Q96I82 304 aa19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 SUCLG2Q96I99 432 aa19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 RNF181Q9P0P0 153 aa19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 TNNQ9UQP3 1299 aa19.25■□□□□ 0.67
SLC6A4-204ENST00000578609 RCAN3Q9UKA8 241 aa19.24■□□□□ 0.67
SLC6A4-204ENST00000578609 ZC3H4Q9UPT8 1303 aaKnown RBP19.24■□□□□ 0.67
SLC6A4-204ENST00000578609 RABL6Q3YEC7 729 aaPredicted RBP19.23■□□□□ 0.67
SLC6A4-204ENST00000578609 ANKRD18AQ8IVF6 992 aa19.23■□□□□ 0.67
SLC6A4-204ENST00000578609 TMX4Q9H1E5 349 aaPredicted RBP19.23■□□□□ 0.67
SLC6A4-204ENST00000578609 ITGA6P23229 1130 aa19.22■□□□□ 0.67
SLC6A4-204ENST00000578609 RTFDC1Q9BY42 306 aaPredicted RBP19.22■□□□□ 0.67
SLC6A4-204ENST00000578609 LMBR1LQ6UX01 489 aa19.21■□□□□ 0.67
SLC6A4-204ENST00000578609 CLUAP1Q96AJ1 413 aa19.21■□□□□ 0.67
SLC6A4-204ENST00000578609 DICER1Q9UPY3 1922 aaKnown RBP19.21■□□□□ 0.67
SLC6A4-204ENST00000578609 DPP8Q6V1X1 898 aaPredicted RBP19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 MPNDQ8N594 471 aa19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 ANKRD44Q8N8A2 993 aa19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 BICC1Q9H694 974 aaKnown RBP19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 ZNF277Q9NRM2 450 aaPredicted RBP19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 BSDC1Q9NW68 430 aaPredicted RBP19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 SPEF2Q9C093 1822 aa19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 COL4A5P29400 1685 aa19.2■□□□□ 0.66
SLC6A4-204ENST00000578609 ANKRD18BA2A2Z9 1011 aa19.19■□□□□ 0.66
SLC6A4-204ENST00000578609 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
SLC6A4-204ENST00000578609 IARSP41252 1262 aaKnown RBP19.19■□□□□ 0.66
SLC6A4-204ENST00000578609 IFIT5Q13325 482 aaKnown RBP19.19■□□□□ 0.66
SLC6A4-204ENST00000578609 DZIP1LQ8IYY4 767 aaKnown RBP19.19■□□□□ 0.66
SLC6A4-204ENST00000578609 TMEM57Q8N5G2 664 aa19.19■□□□□ 0.66
SLC6A4-204ENST00000578609 MEIS3Q99687 375 aa19.19■□□□□ 0.66
SLC6A4-204ENST00000578609 CCDC88AQ3V6T2 1871 aa19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 IGHMBP2P38935 993 aaKnown RBP19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 GPSM2P81274 684 aa19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 SUPT20HQ8NEM7 779 aa19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 VPS33BQ9H267 617 aa19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 CHMP3Q9Y3E7 222 aa19.18■□□□□ 0.66
SLC6A4-204ENST00000578609 RLBP1P12271 317 aa19.17■□□□□ 0.66
SLC6A4-204ENST00000578609 ZNF784Q8NCA9 323 aaPredicted RBP19.17■□□□□ 0.66
SLC6A4-204ENST00000578609 GNAI3P08754 354 aa19.16■□□□□ 0.66
SLC6A4-204ENST00000578609 CCDC57Q2TAC2 916 aa19.16■□□□□ 0.66
SLC6A4-204ENST00000578609 NSFL1CQ9UNZ2 370 aaKnown RBP19.16■□□□□ 0.66
SLC6A4-204ENST00000578609 HDAC5Q9UQL6 1122 aa19.16■□□□□ 0.66
SLC6A4-204ENST00000578609 XDHP47989 1333 aa19.16■□□□□ 0.66
SLC6A4-204ENST00000578609 A0A1B0GUL6 1792 aa19.15■□□□□ 0.66
SLC6A4-204ENST00000578609 MPHOSPH8Q99549 860 aa19.15■□□□□ 0.66
SLC6A4-204ENST00000578609 MINPP1Q9UNW1 487 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms