RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 TRMT112Q9UI30 125 aaKnown RBP13.44□□□□□ -0.26
SKA2-204ENST00000578519 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
SKA2-204ENST00000578519 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
SKA2-204ENST00000578519 CRKLP46109 303 aaKnown RBP13.43□□□□□ -0.26
SKA2-204ENST00000578519 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
SKA2-204ENST00000578519 GORABQ5T7V8 394 aa13.43□□□□□ -0.26
SKA2-204ENST00000578519 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
SKA2-204ENST00000578519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.43□□□□□ -0.26
SKA2-204ENST00000578519 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
SKA2-204ENST00000578519 IRS4O14654 1257 aaPredicted RBP13.42□□□□□ -0.26
SKA2-204ENST00000578519 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
SKA2-204ENST00000578519 CWC27Q6UX04 472 aaKnown RBP13.42□□□□□ -0.26
SKA2-204ENST00000578519 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 SLC4A9Q96Q91 983 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
SKA2-204ENST00000578519 BOLA2Q9H3K6 86 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 ANTXR1Q9H6X2 564 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
SKA2-204ENST00000578519 HSPA4P34932 840 aa13.41□□□□□ -0.26
SKA2-204ENST00000578519 KCNJ4P48050 445 aa13.41□□□□□ -0.26
SKA2-204ENST00000578519 NUCB2P80303 420 aa13.41□□□□□ -0.26
SKA2-204ENST00000578519 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
SKA2-204ENST00000578519 INTS5Q6P9B9 1019 aaKnown RBP13.41□□□□□ -0.26
SKA2-204ENST00000578519 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
SKA2-204ENST00000578519 HAUS7Q99871 368 aa13.41□□□□□ -0.26
SKA2-204ENST00000578519 TBC1D2BQ9UPU7 963 aa13.41□□□□□ -0.26
SKA2-204ENST00000578519 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 GPTP24298 496 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 PSMA5P28066 241 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 NEK4P51957 841 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 CTSWP56202 376 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 HLFQ16534 295 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 GBP4Q96PP9 640 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 TRPC5Q9UL62 973 aaPredicted RBP13.4□□□□□ -0.26
SKA2-204ENST00000578519 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
SKA2-204ENST00000578519 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 HAX1O00165 279 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 LDHAL6AQ6ZMR3 332 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 SNRKQ9NRH2 765 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 CNNM1Q9NRU3 951 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
SKA2-204ENST00000578519 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
SKA2-204ENST00000578519 ABCC12Q96J65 1359 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 GOLGA6L22H0YM25 854 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 IFIT1P09914 478 aaKnown RBP13.38□□□□□ -0.27
SKA2-204ENST00000578519 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 METTL24Q5JXM2 366 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 TTC39AQ5SRH9 613 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 TTLL11Q8NHH1 800 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
SKA2-204ENST00000578519 DBNDD2Q9BQY9 259 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 TM6SF1Q9BZW5 370 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 LSG1Q9H089 658 aaKnown RBP13.38□□□□□ -0.27
SKA2-204ENST00000578519 HMG20BQ9P0W2 317 aa13.38□□□□□ -0.27
SKA2-204ENST00000578519 A0A1B0GUL7 405 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 DDX11L8A8MPP1 907 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 ZFYP08048 801 aaPredicted RBP13.37□□□□□ -0.27
SKA2-204ENST00000578519 ITGA6P23229 1130 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 KRT32Q14532 448 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 ZSCAN25Q6NSZ9 544 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 KBTBD3Q8NAB2 608 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 DNAJC2Q99543 621 aaKnown RBP13.37□□□□□ -0.27
SKA2-204ENST00000578519 HELLSQ9NRZ9 838 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
SKA2-204ENST00000578519 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 UQCRFS1P1P0C7P4 283 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
SKA2-204ENST00000578519 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
SKA2-204ENST00000578519 ITPK1Q13572 414 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 MCMDC2Q4G0Z9 681 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
SKA2-204ENST00000578519 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
SKA2-204ENST00000578519 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 PAG1Q9NWQ8 432 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 TLR7Q9NYK1 1049 aaKnown RBP13.36□□□□□ -0.27
SKA2-204ENST00000578519 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
SKA2-204ENST00000578519 CCDC171Q6TFL3 1326 aa13.36□□□□□ -0.27
SKA2-204ENST00000578519 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
SKA2-204ENST00000578519 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 SSFA2P28290 1259 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
SKA2-204ENST00000578519 ANKRD1Q15327 319 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
SKA2-204ENST00000578519 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 MAP4K1Q92918 833 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 KCNB2Q92953 911 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
SKA2-204ENST00000578519 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
SKA2-204ENST00000578519 CYP46A1Q9Y6A2 500 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 TJP1Q07157 1748 aa13.35□□□□□ -0.27
SKA2-204ENST00000578519 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.35□□□□□ -0.27
SKA2-204ENST00000578519 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
SKA2-204ENST00000578519 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms