RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 PRELPP51888 382 aa27.5■■□□□ 1.99
CDC42EP4-203ENST00000578516 SF3B3Q15393 1217 aaKnown RBP27.5■■□□□ 1.99
CDC42EP4-203ENST00000578516 C7orf43Q8WVR3 580 aa27.5■■□□□ 1.99
CDC42EP4-203ENST00000578516 TIAM2Q8IVF5 1701 aa27.5■■□□□ 1.99
CDC42EP4-203ENST00000578516 NFKBIEO00221 500 aa27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 GRM8O00222 908 aa27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 CTSWP56202 376 aa27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 EPHA10Q5JZY3 1008 aa27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 CELF1Q92879 486 aaKnown RBP27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 CLUAP1Q96AJ1 413 aa27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 CRAMP1Q96RY5 1269 aa27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 SNED1Q8TER0 1413 aa27.49■■□□□ 1.99
CDC42EP4-203ENST00000578516 PPEF1O14829 653 aaPredicted RBP27.48■■□□□ 1.99
CDC42EP4-203ENST00000578516 NBPF7P0C2Y1 421 aaPredicted RBP27.48■■□□□ 1.99
CDC42EP4-203ENST00000578516 API5Q9BZZ5 524 aaKnown RBP27.48■■□□□ 1.99
CDC42EP4-203ENST00000578516 DDX46Q7L014 1031 aaKnown RBP27.47■■□□□ 1.99
CDC42EP4-203ENST00000578516 SUCLG2Q96I99 432 aa27.47■■□□□ 1.99
CDC42EP4-203ENST00000578516 ALDH1B1P30837 517 aa27.46■■□□□ 1.99
CDC42EP4-203ENST00000578516 GREM2Q9H772 168 aa27.46■■□□□ 1.99
CDC42EP4-203ENST00000578516 C9orf78Q9NZ63 289 aaPredicted RBP27.46■■□□□ 1.99
CDC42EP4-203ENST00000578516 DICER1Q9UPY3 1922 aaKnown RBP27.45■■□□□ 1.99
CDC42EP4-203ENST00000578516 GRAPQ13588 217 aa27.45■■□□□ 1.98
CDC42EP4-203ENST00000578516 FAM161AQ3B820 660 aa27.45■■□□□ 1.98
CDC42EP4-203ENST00000578516 ATF7IPQ6VMQ6 1270 aa27.45■■□□□ 1.98
CDC42EP4-203ENST00000578516 TTLL11Q8NHH1 800 aa27.45■■□□□ 1.98
CDC42EP4-203ENST00000578516 GRAPLQ8TC17 118 aaPredicted RBP27.45■■□□□ 1.98
CDC42EP4-203ENST00000578516 A0A1B0GUL6 1792 aa27.45■■□□□ 1.98
CDC42EP4-203ENST00000578516 FOXO4P98177 505 aa27.44■■□□□ 1.98
CDC42EP4-203ENST00000578516 KAZALD1Q96I82 304 aa27.44■■□□□ 1.98
CDC42EP4-203ENST00000578516 LTBP1Q14766 1721 aa27.44■■□□□ 1.98
CDC42EP4-203ENST00000578516 DUOX1Q9NRD9 1551 aa27.43■■□□□ 1.98
CDC42EP4-203ENST00000578516 PLA2G12BQ9BX93 195 aa27.43■■□□□ 1.98
CDC42EP4-203ENST00000578516 RCAN3Q9UKA8 241 aa27.43■■□□□ 1.98
CDC42EP4-203ENST00000578516 RLBP1P12271 317 aa27.42■■□□□ 1.98
CDC42EP4-203ENST00000578516 CCDC152Q4G0S7 254 aa27.42■■□□□ 1.98
CDC42EP4-203ENST00000578516 CCDC93Q567U6 631 aa27.42■■□□□ 1.98
CDC42EP4-203ENST00000578516 ZKSCAN2Q63HK3 967 aa27.42■■□□□ 1.98
CDC42EP4-203ENST00000578516 ARHGAP45Q92619 1136 aa27.42■■□□□ 1.98
CDC42EP4-203ENST00000578516 USP44Q9H0E7 712 aa27.42■■□□□ 1.98
CDC42EP4-203ENST00000578516 UTYO14607 1347 aa27.41■■□□□ 1.98
CDC42EP4-203ENST00000578516 COL4A5P29400 1685 aa27.4■■□□□ 1.98
CDC42EP4-203ENST00000578516 PLIN1O60240 522 aa27.4■■□□□ 1.98
CDC42EP4-203ENST00000578516 CCT4P50991 539 aaKnown RBP27.4■■□□□ 1.98
CDC42EP4-203ENST00000578516 TMEM57Q8N5G2 664 aa27.4■■□□□ 1.98
CDC42EP4-203ENST00000578516 MEIS3Q99687 375 aa27.4■■□□□ 1.98
CDC42EP4-203ENST00000578516 IPO8O15397 1037 aaKnown RBP27.39■■□□□ 1.98
CDC42EP4-203ENST00000578516 C9orf131Q5VYM1 1079 aa27.39■■□□□ 1.98
CDC42EP4-203ENST00000578516 CHMP3Q9Y3E7 222 aa27.39■■□□□ 1.98
CDC42EP4-203ENST00000578516 ATP6V0A2Q9Y487 856 aa27.39■■□□□ 1.98
CDC42EP4-203ENST00000578516 YY1P25490 414 aa27.38■■□□□ 1.97
CDC42EP4-203ENST00000578516 LMBR1LQ6UX01 489 aa27.38■■□□□ 1.97
CDC42EP4-203ENST00000578516 RNF181Q9P0P0 153 aa27.38■■□□□ 1.97
CDC42EP4-203ENST00000578516 CSF1RP07333 972 aa27.37■■□□□ 1.97
CDC42EP4-203ENST00000578516 HSP90B1P14625 803 aaKnown RBP27.37■■□□□ 1.97
CDC42EP4-203ENST00000578516 INTS3Q68E01 1043 aaKnown RBP27.37■■□□□ 1.97
CDC42EP4-203ENST00000578516 TAOK3Q9H2K8 898 aa27.37■■□□□ 1.97
CDC42EP4-203ENST00000578516 BICC1Q9H694 974 aaKnown RBP27.37■■□□□ 1.97
CDC42EP4-203ENST00000578516 RTL9Q8NET4 1388 aa27.36■■□□□ 1.97
CDC42EP4-203ENST00000578516 ITGA6P23229 1130 aa27.36■■□□□ 1.97
CDC42EP4-203ENST00000578516 ANKRD44Q8N8A2 993 aa27.36■■□□□ 1.97
CDC42EP4-203ENST00000578516 PANK1Q8TE04 598 aa27.36■■□□□ 1.97
CDC42EP4-203ENST00000578516 ZNF277Q9NRM2 450 aaPredicted RBP27.36■■□□□ 1.97
CDC42EP4-203ENST00000578516 BBOX1O75936 387 aa27.35■■□□□ 1.97
CDC42EP4-203ENST00000578516 RPS8P62241 208 aaKnown RBP27.35■■□□□ 1.97
CDC42EP4-203ENST00000578516 FKBP4Q02790 459 aaKnown RBP eCLIP27.34■■□□□ 1.97
CDC42EP4-203ENST00000578516 SOGA3Q5TF21 947 aa27.34■■□□□ 1.97
CDC42EP4-203ENST00000578516 ZNF594Q96JF6 807 aaPredicted RBP27.34■■□□□ 1.97
CDC42EP4-203ENST00000578516 ANKRD18AQ8IVF6 992 aa27.33■■□□□ 1.97
CDC42EP4-203ENST00000578516 SP8Q8IXZ3 490 aa27.33■■□□□ 1.97
CDC42EP4-203ENST00000578516 GPR101Q96P66 508 aaPredicted RBP27.33■■□□□ 1.97
CDC42EP4-203ENST00000578516 LTBP3Q9NS15 1303 aa27.33■■□□□ 1.97
CDC42EP4-203ENST00000578516 GPSM2P81274 684 aa27.32■■□□□ 1.96
CDC42EP4-203ENST00000578516 FTSJ3Q8IY81 847 aaKnown RBP27.32■■□□□ 1.96
CDC42EP4-203ENST00000578516 DZIP1LQ8IYY4 767 aaKnown RBP27.32■■□□□ 1.96
CDC42EP4-203ENST00000578516 UBTFL1P0CB47 393 aaPredicted RBP27.31■■□□□ 1.96
CDC42EP4-203ENST00000578516 LMNB1P20700 586 aa27.31■■□□□ 1.96
CDC42EP4-203ENST00000578516 LRRFIP2Q9Y608 721 aaKnown RBP27.31■■□□□ 1.96
CDC42EP4-203ENST00000578516 RTKN2Q8IZC4 609 aa27.3■■□□□ 1.96
CDC42EP4-203ENST00000578516 CDC5LQ99459 802 aaKnown RBP27.3■■□□□ 1.96
CDC42EP4-203ENST00000578516 WTIPA6NIX2 430 aaPredicted RBP27.29■■□□□ 1.96
CDC42EP4-203ENST00000578516 RABL6Q3YEC7 729 aaPredicted RBP27.29■■□□□ 1.96
CDC42EP4-203ENST00000578516 C20orf194Q5TEA3 1177 aa27.29■■□□□ 1.96
CDC42EP4-203ENST00000578516 ITPRIPQ8IWB1 547 aa27.29■■□□□ 1.96
CDC42EP4-203ENST00000578516 ZNF526Q8TF50 670 aaPredicted RBP27.29■■□□□ 1.96
CDC42EP4-203ENST00000578516 ANKRD18BA2A2Z9 1011 aa27.28■■□□□ 1.96
CDC42EP4-203ENST00000578516 CC2D2BQ6DHV5 1058 aa27.28■■□□□ 1.96
CDC42EP4-203ENST00000578516 DPP8Q6V1X1 898 aaPredicted RBP27.28■■□□□ 1.96
CDC42EP4-203ENST00000578516 MPNDQ8N594 471 aa27.28■■□□□ 1.96
CDC42EP4-203ENST00000578516 IFIT5Q13325 482 aaKnown RBP27.27■■□□□ 1.96
CDC42EP4-203ENST00000578516 KLHDC4Q8TBB5 520 aa27.27■■□□□ 1.96
CDC42EP4-203ENST00000578516 PSMD1Q99460 953 aa27.27■■□□□ 1.96
CDC42EP4-203ENST00000578516 NSFL1CQ9UNZ2 370 aaKnown RBP27.27■■□□□ 1.96
CDC42EP4-203ENST00000578516 IARSP41252 1262 aaKnown RBP27.26■■□□□ 1.95
CDC42EP4-203ENST00000578516 AOC3Q16853 763 aa27.26■■□□□ 1.95
CDC42EP4-203ENST00000578516 C1orf115Q9H7X2 142 aa27.26■■□□□ 1.95
CDC42EP4-203ENST00000578516 IGHMBP2P38935 993 aaKnown RBP27.25■■□□□ 1.95
CDC42EP4-203ENST00000578516 TMC4Q7Z404 712 aa27.25■■□□□ 1.95
CDC42EP4-203ENST00000578516 POLLQ9UGP5 575 aa27.25■■□□□ 1.95
CDC42EP4-203ENST00000578516 CCDC57Q2TAC2 916 aa27.24■■□□□ 1.95
CDC42EP4-203ENST00000578516 PUS3Q9BZE2 481 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms