RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 LAMB2P55268 1798 aa27.5■■□□□ 1.99
TSEN54-205ENST00000578415 ANKRD36CQ5JPF3 1778 aa27.5■■□□□ 1.99
TSEN54-205ENST00000578415 SH3TC1Q8TE82 1336 aa27.49■■□□□ 1.99
TSEN54-205ENST00000578415 ECE1P42892 770 aa27.49■■□□□ 1.99
TSEN54-205ENST00000578415 GRAPQ13588 217 aa27.49■■□□□ 1.99
TSEN54-205ENST00000578415 CIAPIN1Q6FI81 312 aa27.49■■□□□ 1.99
TSEN54-205ENST00000578415 DDX46Q7L014 1031 aaKnown RBP27.49■■□□□ 1.99
TSEN54-205ENST00000578415 GRAPLQ8TC17 118 aaPredicted RBP27.49■■□□□ 1.99
TSEN54-205ENST00000578415 CHL1O00533 1208 aa27.48■■□□□ 1.99
TSEN54-205ENST00000578415 GRM1Q13255 1194 aa27.48■■□□□ 1.99
TSEN54-205ENST00000578415 GPR101Q96P66 508 aaPredicted RBP27.48■■□□□ 1.99
TSEN54-205ENST00000578415 CDHR2Q9BYE9 1310 aa27.47■■□□□ 1.99
TSEN54-205ENST00000578415 RAD17O75943 681 aa27.47■■□□□ 1.99
TSEN54-205ENST00000578415 HIRAP54198 1017 aaPredicted RBP27.46■■□□□ 1.99
TSEN54-205ENST00000578415 NEUROD2Q15784 382 aa27.46■■□□□ 1.99
TSEN54-205ENST00000578415 ZNF428Q96B54 188 aa27.46■■□□□ 1.99
TSEN54-205ENST00000578415 GLIS2Q9BZE0 524 aaPredicted RBP27.46■■□□□ 1.99
TSEN54-205ENST00000578415 CHPF2Q9P2E5 772 aa27.46■■□□□ 1.99
TSEN54-205ENST00000578415 PGAP2Q9UHJ9 254 aa27.46■■□□□ 1.99
TSEN54-205ENST00000578415 DUOX1Q9NRD9 1551 aa27.46■■□□□ 1.99
TSEN54-205ENST00000578415 TRPM7Q96QT4 1865 aa27.45■■□□□ 1.99
TSEN54-205ENST00000578415 YDJCA8MPS7 323 aa27.45■■□□□ 1.98
TSEN54-205ENST00000578415 CCDC146Q8IYE0 955 aa27.45■■□□□ 1.98
TSEN54-205ENST00000578415 CELF2O95319 508 aaKnown RBP27.44■■□□□ 1.98
TSEN54-205ENST00000578415 SAPCD2Q86UD0 394 aa27.44■■□□□ 1.98
TSEN54-205ENST00000578415 TRPM4Q8TD43 1214 aa27.44■■□□□ 1.98
TSEN54-205ENST00000578415 ABHD8Q96I13 439 aa27.44■■□□□ 1.98
TSEN54-205ENST00000578415 BCL2L13Q9BXK5 485 aa27.44■■□□□ 1.98
TSEN54-205ENST00000578415 TRIM35Q9UPQ4 493 aa27.44■■□□□ 1.98
TSEN54-205ENST00000578415 AOC2O75106 756 aa27.43■■□□□ 1.98
TSEN54-205ENST00000578415 TNIP1Q15025 636 aa27.43■■□□□ 1.98
TSEN54-205ENST00000578415 SHTN1A0MZ66 631 aa27.42■■□□□ 1.98
TSEN54-205ENST00000578415 TMC4Q7Z404 712 aa27.42■■□□□ 1.98
TSEN54-205ENST00000578415 PLBD2Q8NHP8 589 aa27.42■■□□□ 1.98
TSEN54-205ENST00000578415 ZC3H15Q8WU90 426 aaKnown RBP27.42■■□□□ 1.98
TSEN54-205ENST00000578415 BEGAINQ9BUH8 593 aa27.42■■□□□ 1.98
TSEN54-205ENST00000578415 MAP2K2P36507 400 aa27.41■■□□□ 1.98
TSEN54-205ENST00000578415 ISCA1Q9BUE6 129 aa27.41■■□□□ 1.98
TSEN54-205ENST00000578415 LAS1LQ9Y4W2 734 aaKnown RBP27.41■■□□□ 1.98
TSEN54-205ENST00000578415 LRRC37AA6NMS7 1700 aa27.41■■□□□ 1.98
TSEN54-205ENST00000578415 HDGFL1Q5TGJ6 251 aa27.4■■□□□ 1.98
TSEN54-205ENST00000578415 CNOT7Q9UIV1 285 aaKnown RBP27.4■■□□□ 1.98
TSEN54-205ENST00000578415 TAF1P21675 1872 aa27.4■■□□□ 1.98
TSEN54-205ENST00000578415 ANKRD13DQ6ZTN6 518 aa27.39■■□□□ 1.98
TSEN54-205ENST00000578415 CELF1Q92879 486 aaKnown RBP27.39■■□□□ 1.98
TSEN54-205ENST00000578415 RUNDC1Q96C34 613 aa27.39■■□□□ 1.98
TSEN54-205ENST00000578415 FAM89AQ96GI7 184 aa27.39■■□□□ 1.98
TSEN54-205ENST00000578415 MYBBP1AQ9BQG0 1328 aaKnown RBP27.39■■□□□ 1.97
TSEN54-205ENST00000578415 DDX60Q8IY21 1712 aaKnown RBP27.38■■□□□ 1.97
TSEN54-205ENST00000578415 HOXB7P09629 217 aa27.38■■□□□ 1.97
TSEN54-205ENST00000578415 SF3B3Q15393 1217 aaKnown RBP27.38■■□□□ 1.97
TSEN54-205ENST00000578415 HHIPL1Q96JK4 782 aa27.38■■□□□ 1.97
TSEN54-205ENST00000578415 TSKSQ9UJT2 592 aa27.38■■□□□ 1.97
TSEN54-205ENST00000578415 COL4A1P02462 1669 aa27.37■■□□□ 1.97
TSEN54-205ENST00000578415 ATP5J2-PTCD1G3V325 749 aa27.37■■□□□ 1.97
TSEN54-205ENST00000578415 MICALL2Q8IY33 904 aa27.37■■□□□ 1.97
TSEN54-205ENST00000578415 ZNF408Q9H9D4 720 aa27.37■■□□□ 1.97
TSEN54-205ENST00000578415 ZBTB12Q9Y330 459 aaPredicted RBP27.37■■□□□ 1.97
TSEN54-205ENST00000578415 WASHC4Q2M389 1173 aa27.36■■□□□ 1.97
TSEN54-205ENST00000578415 CDC37L1Q7L3B6 337 aa27.36■■□□□ 1.97
TSEN54-205ENST00000578415 DBF4Q9UBU7 674 aaPredicted RBP27.36■■□□□ 1.97
TSEN54-205ENST00000578415 NSFL1CQ9UNZ2 370 aaKnown RBP27.36■■□□□ 1.97
TSEN54-205ENST00000578415 H7C1D1 291 aa27.35■■□□□ 1.97
TSEN54-205ENST00000578415 PSMD14O00487 310 aa27.35■■□□□ 1.97
TSEN54-205ENST00000578415 DPF2Q92785 391 aa27.34■■□□□ 1.97
TSEN54-205ENST00000578415 DBNDD1Q9H9R9 158 aa27.34■■□□□ 1.97
TSEN54-205ENST00000578415 POLLQ9UGP5 575 aa27.34■■□□□ 1.97
TSEN54-205ENST00000578415 GPSM2P81274 684 aa27.33■■□□□ 1.97
TSEN54-205ENST00000578415 RTL5Q5HYW3 569 aaPredicted RBP27.33■■□□□ 1.97
TSEN54-205ENST00000578415 DLK2Q6UY11 383 aa27.33■■□□□ 1.97
TSEN54-205ENST00000578415 SAMD7Q7Z3H4 446 aa27.33■■□□□ 1.97
TSEN54-205ENST00000578415 RIMBP2O15034 1052 aa27.32■■□□□ 1.96
TSEN54-205ENST00000578415 BRPF1P55201 1214 aaPredicted RBP27.32■■□□□ 1.96
TSEN54-205ENST00000578415 TRIM28Q13263 835 aaKnown RBP27.32■■□□□ 1.96
TSEN54-205ENST00000578415 DUSP27Q5VZP5 1158 aa27.32■■□□□ 1.96
TSEN54-205ENST00000578415 USP48Q86UV5 1035 aa27.32■■□□□ 1.96
TSEN54-205ENST00000578415 CFAP44Q96MT7 982 aa27.32■■□□□ 1.96
TSEN54-205ENST00000578415 HYPKQ9NX55 129 aa27.32■■□□□ 1.96
TSEN54-205ENST00000578415 ADAMTS8Q9UP79 889 aa27.32■■□□□ 1.96
TSEN54-205ENST00000578415 C6orf229H3BNL8 230 aa27.31■■□□□ 1.96
TSEN54-205ENST00000578415 EGFRP00533 1210 aa27.31■■□□□ 1.96
TSEN54-205ENST00000578415 DDX10Q13206 875 aaKnown RBP27.31■■□□□ 1.96
TSEN54-205ENST00000578415 WDR43Q15061 677 aaKnown RBP eCLIP27.31■■□□□ 1.96
TSEN54-205ENST00000578415 KCNQ5Q9NR82 932 aa27.31■■□□□ 1.96
TSEN54-205ENST00000578415 IRS4O14654 1257 aaPredicted RBP27.3■■□□□ 1.96
TSEN54-205ENST00000578415 CA12O43570 354 aa27.3■■□□□ 1.96
TSEN54-205ENST00000578415 RTL9Q8NET4 1388 aa27.3■■□□□ 1.96
TSEN54-205ENST00000578415 ECE2O60344 883 aa27.29■■□□□ 1.96
TSEN54-205ENST00000578415 TBC1D10BQ4KMP7 808 aaPredicted RBP27.29■■□□□ 1.96
TSEN54-205ENST00000578415 ZIC5Q96T25 663 aa27.29■■□□□ 1.96
TSEN54-205ENST00000578415 MBIPQ9NS73 344 aa27.29■■□□□ 1.96
TSEN54-205ENST00000578415 RPS8P62241 208 aaKnown RBP27.28■■□□□ 1.96
TSEN54-205ENST00000578415 DOK7Q18PE1 504 aa27.28■■□□□ 1.96
TSEN54-205ENST00000578415 TBC1D16Q8TBP0 767 aa27.28■■□□□ 1.96
TSEN54-205ENST00000578415 RPS12P25398 132 aaKnown RBP27.27■■□□□ 1.96
TSEN54-205ENST00000578415 FAM161AQ3B820 660 aa27.27■■□□□ 1.96
TSEN54-205ENST00000578415 EYA3Q99504 573 aa27.27■■□□□ 1.96
TSEN54-205ENST00000578415 CCDC85CA6NKD9 419 aa27.26■■□□□ 1.95
TSEN54-205ENST00000578415 ZNF853P0CG23 659 aa27.26■■□□□ 1.95
TSEN54-205ENST00000578415 HUNKP57058 714 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms