RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
LINC01543-201ENST00000578367 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
LINC01543-201ENST00000578367 FHDC1Q9C0D6 1143 aaPredicted RBP17.35■□□□□ 0.37
LINC01543-201ENST00000578367 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
LINC01543-201ENST00000578367 BBOX1O75936 387 aa17.34■□□□□ 0.37
LINC01543-201ENST00000578367 AFDNP55196 1824 aaKnown RBP17.34■□□□□ 0.37
LINC01543-201ENST00000578367 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
LINC01543-201ENST00000578367 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
LINC01543-201ENST00000578367 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
LINC01543-201ENST00000578367 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
LINC01543-201ENST00000578367 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
LINC01543-201ENST00000578367 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
LINC01543-201ENST00000578367 KIF13BQ9NQT8 1826 aa17.33■□□□□ 0.37
LINC01543-201ENST00000578367 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
LINC01543-201ENST00000578367 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
LINC01543-201ENST00000578367 GRIPAP1Q4V328 841 aa17.33■□□□□ 0.36
LINC01543-201ENST00000578367 ANKRD44Q8N8A2 993 aa17.33■□□□□ 0.36
LINC01543-201ENST00000578367 PIM2Q9P1W9 311 aa17.33■□□□□ 0.36
LINC01543-201ENST00000578367 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 DPEP1P16444 411 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 KCNA3P22001 575 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 GRAPQ13588 217 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 C3orf67Q6ZVT6 689 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 TTLL6Q8N841 843 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 GRAPLQ8TC17 118 aaPredicted RBP17.32■□□□□ 0.36
LINC01543-201ENST00000578367 CRBNQ96SW2 442 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
LINC01543-201ENST00000578367 ITGA6P23229 1130 aa17.31■□□□□ 0.36
LINC01543-201ENST00000578367 ATP8B2P98198 1209 aa17.31■□□□□ 0.36
LINC01543-201ENST00000578367 SOGA3Q5TF21 947 aa17.31■□□□□ 0.36
LINC01543-201ENST00000578367 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
LINC01543-201ENST00000578367 GREM2Q9H772 168 aa17.31■□□□□ 0.36
LINC01543-201ENST00000578367 LAMB2P55268 1798 aa17.3■□□□□ 0.36
LINC01543-201ENST00000578367 A0A0G2JLW4 131 aa17.3■□□□□ 0.36
LINC01543-201ENST00000578367 HMMRO75330 724 aa17.3■□□□□ 0.36
LINC01543-201ENST00000578367 NEFLP07196 543 aa17.3■□□□□ 0.36
LINC01543-201ENST00000578367 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
LINC01543-201ENST00000578367 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
LINC01543-201ENST00000578367 ZNF622Q969S3 477 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC01543-201ENST00000578367 CHRNA5P30532 468 aa17.29■□□□□ 0.36
LINC01543-201ENST00000578367 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
LINC01543-201ENST00000578367 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
LINC01543-201ENST00000578367 DALRD3Q5D0E6 543 aaKnown RBP17.29■□□□□ 0.36
LINC01543-201ENST00000578367 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
LINC01543-201ENST00000578367 CEP85Q6P2H3 762 aa17.29■□□□□ 0.36
LINC01543-201ENST00000578367 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
LINC01543-201ENST00000578367 SSH3Q8TE77 659 aa17.29■□□□□ 0.36
LINC01543-201ENST00000578367 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
LINC01543-201ENST00000578367 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
LINC01543-201ENST00000578367 DDX60Q8IY21 1712 aaKnown RBP17.28■□□□□ 0.36
LINC01543-201ENST00000578367 SRGAP3O43295 1099 aa17.28■□□□□ 0.36
LINC01543-201ENST00000578367 POLA2Q14181 598 aa17.28■□□□□ 0.36
LINC01543-201ENST00000578367 COPRSQ9NQ92 184 aa17.28■□□□□ 0.36
LINC01543-201ENST00000578367 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
LINC01543-201ENST00000578367 TAF7LQ5H9L4 462 aa17.27■□□□□ 0.36
LINC01543-201ENST00000578367 PRPF40BQ6NWY9 871 aaKnown RBP17.27■□□□□ 0.36
LINC01543-201ENST00000578367 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
LINC01543-201ENST00000578367 NLGN2Q8NFZ4 835 aa17.27■□□□□ 0.36
LINC01543-201ENST00000578367 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.35
LINC01543-201ENST00000578367 RFX5P48382 616 aaPredicted RBP17.26■□□□□ 0.35
LINC01543-201ENST00000578367 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
LINC01543-201ENST00000578367 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
LINC01543-201ENST00000578367 SEC31BQ9NQW1 1179 aa17.26■□□□□ 0.35
LINC01543-201ENST00000578367 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
LINC01543-201ENST00000578367 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
LINC01543-201ENST00000578367 PPEF1O14829 653 aaPredicted RBP17.25■□□□□ 0.35
LINC01543-201ENST00000578367 CIAO1O76071 339 aa17.25■□□□□ 0.35
LINC01543-201ENST00000578367 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
LINC01543-201ENST00000578367 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
LINC01543-201ENST00000578367 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
LINC01543-201ENST00000578367 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
LINC01543-201ENST00000578367 LDHAL6AQ6ZMR3 332 aa17.24■□□□□ 0.35
LINC01543-201ENST00000578367 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
LINC01543-201ENST00000578367 C1orf115Q9H7X2 142 aa17.24■□□□□ 0.35
LINC01543-201ENST00000578367 NOP58Q9Y2X3 529 aaKnown RBP17.24■□□□□ 0.35
LINC01543-201ENST00000578367 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
LINC01543-201ENST00000578367 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
LINC01543-201ENST00000578367 ANKRD2Q9GZV1 360 aa17.23■□□□□ 0.35
LINC01543-201ENST00000578367 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
LINC01543-201ENST00000578367 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
LINC01543-201ENST00000578367 EYA2O00167 538 aa17.22■□□□□ 0.35
LINC01543-201ENST00000578367 IL15P40933 162 aaPredicted RBP17.22■□□□□ 0.35
LINC01543-201ENST00000578367 HDAC1Q13547 482 aaPredicted RBP17.22■□□□□ 0.35
LINC01543-201ENST00000578367 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
LINC01543-201ENST00000578367 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
LINC01543-201ENST00000578367 DLEC1Q9Y238 1755 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 GRIN3BO60391 1043 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 ERC1Q8IUD2 1116 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 RIPOR2Q9Y4F9 1068 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 MYH3P11055 1940 aa17.21■□□□□ 0.35
LINC01543-201ENST00000578367 G3BP1Q13283 466 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC01543-201ENST00000578367 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
LINC01543-201ENST00000578367 MINPP1Q9UNW1 487 aa17.2■□□□□ 0.34
LINC01543-201ENST00000578367 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
LINC01543-201ENST00000578367 COL11A2P13942 1736 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms