RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 PCCAP05165 728 aaPredicted RBP29.47■■■□□ 2.31
VAPA-205ENST00000578314 HSP90B1P14625 803 aaKnown RBP29.47■■■□□ 2.31
VAPA-205ENST00000578314 TMC4Q7Z404 712 aa29.47■■■□□ 2.31
VAPA-205ENST00000578314 JDP2Q8WYK2 163 aa29.47■■■□□ 2.31
VAPA-205ENST00000578314 L3MBTL3Q96JM7 780 aaPredicted RBP29.47■■■□□ 2.31
VAPA-205ENST00000578314 RTFDC1Q9BY42 306 aaPredicted RBP29.47■■■□□ 2.31
VAPA-205ENST00000578314 VPS33BQ9H267 617 aa29.47■■■□□ 2.31
VAPA-205ENST00000578314 ZNF521Q96K83 1311 aa29.46■■■□□ 2.31
VAPA-205ENST00000578314 ZNF541Q9H0D2 1346 aa29.45■■■□□ 2.31
VAPA-205ENST00000578314 IGKV5-2P06315 115 aa29.45■■■□□ 2.31
VAPA-205ENST00000578314 HTRA3P83110 453 aa29.45■■■□□ 2.31
VAPA-205ENST00000578314 NEXNQ0ZGT2 675 aa29.43■■■□□ 2.3
VAPA-205ENST00000578314 FLIIQ13045 1269 aa29.43■■■□□ 2.3
VAPA-205ENST00000578314 LARGE2Q8N3Y3 721 aa29.43■■■□□ 2.3
VAPA-205ENST00000578314 MPNDQ8N594 471 aa29.43■■■□□ 2.3
VAPA-205ENST00000578314 SUPT20HQ8NEM7 779 aa29.43■■■□□ 2.3
VAPA-205ENST00000578314 LAMB2P55268 1798 aa29.43■■■□□ 2.3
VAPA-205ENST00000578314 DPP8Q6V1X1 898 aaPredicted RBP29.42■■■□□ 2.3
VAPA-205ENST00000578314 CELF1Q92879 486 aaKnown RBP29.42■■■□□ 2.3
VAPA-205ENST00000578314 DDX60Q8IY21 1712 aaKnown RBP29.42■■■□□ 2.3
VAPA-205ENST00000578314 IQCA1LA6NCM1 817 aa29.41■■■□□ 2.3
VAPA-205ENST00000578314 PDE8AO60658 829 aa29.4■■■□□ 2.3
VAPA-205ENST00000578314 GPC2Q8N158 579 aa29.4■■■□□ 2.3
VAPA-205ENST00000578314 CDHR2Q9BYE9 1310 aa29.4■■■□□ 2.3
VAPA-205ENST00000578314 PPIP5K2O43314 1243 aa29.39■■■□□ 2.3
VAPA-205ENST00000578314 EIF6P56537 245 aaKnown RBP29.39■■■□□ 2.3
VAPA-205ENST00000578314 JARID2Q92833 1246 aaPredicted RBP29.39■■■□□ 2.3
VAPA-205ENST00000578314 COL4A5P29400 1685 aa29.39■■■□□ 2.3
VAPA-205ENST00000578314 NEURL1BA8MQ27 555 aa29.38■■■□□ 2.29
VAPA-205ENST00000578314 CCER2I3L3R5 266 aa29.38■■■□□ 2.29
VAPA-205ENST00000578314 RPS8P62241 208 aaKnown RBP29.38■■■□□ 2.29
VAPA-205ENST00000578314 KLRG1Q96E93 195 aa29.38■■■□□ 2.29
VAPA-205ENST00000578314 FKBP5Q13451 457 aaPredicted RBP29.37■■■□□ 2.29
VAPA-205ENST00000578314 AOC3Q16853 763 aa29.37■■■□□ 2.29
VAPA-205ENST00000578314 CWF19L2Q2TBE0 894 aaKnown RBP29.37■■■□□ 2.29
VAPA-205ENST00000578314 CCDC152Q4G0S7 254 aa29.37■■■□□ 2.29
VAPA-205ENST00000578314 NIM1KQ8IY84 436 aa29.37■■■□□ 2.29
VAPA-205ENST00000578314 TAF1DQ9H5J8 278 aaPredicted RBP29.37■■■□□ 2.29
VAPA-205ENST00000578314 SCN4AP35499 1836 aa29.36■■■□□ 2.29
VAPA-205ENST00000578314 H7C1W4 665 aa29.35■■■□□ 2.29
VAPA-205ENST00000578314 KIAA2012Q0VF49 1180 aa29.35■■■□□ 2.29
VAPA-205ENST00000578314 DNAAF4Q8WXU2 420 aa29.35■■■□□ 2.29
VAPA-205ENST00000578314 SEC31BQ9NQW1 1179 aa29.35■■■□□ 2.29
VAPA-205ENST00000578314 HACL1Q9UJ83 578 aa29.35■■■□□ 2.29
VAPA-205ENST00000578314 CHADLQ6NUI6 762 aa29.33■■■□□ 2.29
VAPA-205ENST00000578314 ZNRF3Q9ULT6 936 aa29.33■■■□□ 2.29
VAPA-205ENST00000578314 NSFL1CQ9UNZ2 370 aaKnown RBP29.33■■■□□ 2.29
VAPA-205ENST00000578314 POTEIP0CG38 1075 aa29.32■■■□□ 2.28
VAPA-205ENST00000578314 POTEJP0CG39 1038 aa29.32■■■□□ 2.28
VAPA-205ENST00000578314 GCKRQ14397 625 aa29.32■■■□□ 2.28
VAPA-205ENST00000578314 LINS1Q8NG48 757 aa29.32■■■□□ 2.28
VAPA-205ENST00000578314 JMYQ8N9B5 988 aa29.31■■■□□ 2.28
VAPA-205ENST00000578314 GJA3Q9Y6H8 435 aa29.31■■■□□ 2.28
VAPA-205ENST00000578314 TAF1P21675 1872 aa29.3■■■□□ 2.28
VAPA-205ENST00000578314 E9PSI1 815 aa29.3■■■□□ 2.28
VAPA-205ENST00000578314 EPHX2P34913 555 aa29.3■■■□□ 2.28
VAPA-205ENST00000578314 CTSWP56202 376 aa29.3■■■□□ 2.28
VAPA-205ENST00000578314 GPSM2P81274 684 aa29.3■■■□□ 2.28
VAPA-205ENST00000578314 TTLL11Q8NHH1 800 aa29.3■■■□□ 2.28
VAPA-205ENST00000578314 COL4A1P02462 1669 aa29.3■■■□□ 2.28
VAPA-205ENST00000578314 UBE3BQ7Z3V4 1068 aa29.29■■■□□ 2.28
VAPA-205ENST00000578314 LDHDQ86WU2 507 aa29.29■■■□□ 2.28
VAPA-205ENST00000578314 CCDC85AQ96PX6 553 aaPredicted RBP29.29■■■□□ 2.28
VAPA-205ENST00000578314 POLLQ9UGP5 575 aa29.29■■■□□ 2.28
VAPA-205ENST00000578314 LRRC37AA6NMS7 1700 aa29.28■■■□□ 2.28
VAPA-205ENST00000578314 CXCL9Q07325 125 aa29.28■■■□□ 2.28
VAPA-205ENST00000578314 PNMA8AQ86V59 439 aaPredicted RBP29.28■■■□□ 2.28
VAPA-205ENST00000578314 PODXL2Q9NZ53 605 aa29.28■■■□□ 2.28
VAPA-205ENST00000578314 DUOX1Q9NRD9 1551 aa29.27■■■□□ 2.28
VAPA-205ENST00000578314 CASP7P55210 303 aa29.27■■■□□ 2.28
VAPA-205ENST00000578314 WASHC4Q2M389 1173 aa29.27■■■□□ 2.28
VAPA-205ENST00000578314 PLA2G12BQ9BX93 195 aa29.27■■■□□ 2.28
VAPA-205ENST00000578314 SCNN1DP51172 638 aa29.26■■■□□ 2.27
VAPA-205ENST00000578314 SLFN5Q08AF3 891 aa29.26■■■□□ 2.27
VAPA-205ENST00000578314 BEND3Q5T5X7 828 aa29.26■■■□□ 2.27
VAPA-205ENST00000578314 ANKRD18AQ8IVF6 992 aa29.26■■■□□ 2.27
VAPA-205ENST00000578314 CACNA1FO60840 1977 aa29.26■■■□□ 2.27
VAPA-205ENST00000578314 F6X3S4 739 aa29.25■■■□□ 2.27
VAPA-205ENST00000578314 C6orf229H3BNL8 230 aa29.25■■■□□ 2.27
VAPA-205ENST00000578314 EAPPQ56P03 285 aaPredicted RBP29.25■■■□□ 2.27
VAPA-205ENST00000578314 TBC1D16Q8TBP0 767 aa29.25■■■□□ 2.27
VAPA-205ENST00000578314 RTL9Q8NET4 1388 aa29.25■■■□□ 2.27
VAPA-205ENST00000578314 LMOD1P29536 600 aaPredicted RBP29.24■■■□□ 2.27
VAPA-205ENST00000578314 CDC5LQ99459 802 aaKnown RBP29.24■■■□□ 2.27
VAPA-205ENST00000578314 EYA3Q99504 573 aa29.24■■■□□ 2.27
VAPA-205ENST00000578314 GREM2Q9H772 168 aa29.24■■■□□ 2.27
VAPA-205ENST00000578314 EPS15P42566 896 aa29.23■■■□□ 2.27
VAPA-205ENST00000578314 IFFO2Q5TF58 517 aa29.23■■■□□ 2.27
VAPA-205ENST00000578314 CIAPIN1Q6FI81 312 aa29.23■■■□□ 2.27
VAPA-205ENST00000578314 ADAMTSL1Q8N6G6 1762 aa29.23■■■□□ 2.27
VAPA-205ENST00000578314 YDJCA8MPS7 323 aa29.22■■■□□ 2.27
VAPA-205ENST00000578314 TNIP1Q15025 636 aa29.22■■■□□ 2.27
VAPA-205ENST00000578314 PCNTO95613 3336 aa29.22■■■□□ 2.27
VAPA-205ENST00000578314 CSF1RP07333 972 aa29.21■■■□□ 2.27
VAPA-205ENST00000578314 BSDC1Q9NW68 430 aaPredicted RBP29.21■■■□□ 2.27
VAPA-205ENST00000578314 ANKIB1Q9P2G1 1089 aa29.21■■■□□ 2.27
VAPA-205ENST00000578314 RIMBP2O15034 1052 aa29.2■■■□□ 2.26
VAPA-205ENST00000578314 RAD17O75943 681 aa29.2■■■□□ 2.26
VAPA-205ENST00000578314 TRMT2AQ8IZ69 625 aaKnown RBP29.2■■■□□ 2.26
VAPA-205ENST00000578314 CREBZFQ9NS37 354 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms