RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 DPEP1P16444 411 aa27.91■■■□□ 2.06
PSMD11-206ENST00000578213 HOXA10P31260 410 aaPredicted RBP27.91■■■□□ 2.06
PSMD11-206ENST00000578213 SUPT16HQ9Y5B9 1047 aaKnown RBP27.91■■■□□ 2.06
PSMD11-206ENST00000578213 CHRNA5P30532 468 aa27.9■■■□□ 2.06
PSMD11-206ENST00000578213 C3orf67Q6ZVT6 689 aa27.9■■■□□ 2.06
PSMD11-206ENST00000578213 NLGN2Q8NFZ4 835 aa27.9■■■□□ 2.06
PSMD11-206ENST00000578213 COG6Q9Y2V7 657 aa27.9■■■□□ 2.06
PSMD11-206ENST00000578213 C20orf194Q5TEA3 1177 aa27.89■■■□□ 2.06
PSMD11-206ENST00000578213 RBM17Q96I25 401 aaKnown RBP27.89■■■□□ 2.06
PSMD11-206ENST00000578213 SUCLG2Q96I99 432 aa27.89■■■□□ 2.06
PSMD11-206ENST00000578213 SLX4Q8IY92 1834 aa27.89■■■□□ 2.06
PSMD11-206ENST00000578213 SPEF2Q9C093 1822 aa27.89■■■□□ 2.06
PSMD11-206ENST00000578213 A0A0G2JLW4 131 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 ZBTB7BO15156 539 aaPredicted RBP27.88■■■□□ 2.05
PSMD11-206ENST00000578213 CSF1RP07333 972 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 ALDH1B1P30837 517 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 FOXO4P98177 505 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 TTLL11Q8NHH1 800 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 CNKSR1Q969H4 720 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 CRAMP1Q96RY5 1269 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 PIM2Q9P1W9 311 aa27.88■■■□□ 2.05
PSMD11-206ENST00000578213 KCNA3P22001 575 aa27.87■■■□□ 2.05
PSMD11-206ENST00000578213 RABL6Q3YEC7 729 aaPredicted RBP27.87■■■□□ 2.05
PSMD11-206ENST00000578213 DDX46Q7L014 1031 aaKnown RBP27.87■■■□□ 2.05
PSMD11-206ENST00000578213 KAZALD1Q96I82 304 aa27.87■■■□□ 2.05
PSMD11-206ENST00000578213 GNAI2P04899 355 aa27.86■■■□□ 2.05
PSMD11-206ENST00000578213 LRRC37AA6NMS7 1700 aa27.86■■■□□ 2.05
PSMD11-206ENST00000578213 ZNF622Q969S3 477 aaKnown RBP eCLIP27.85■■■□□ 2.051e-8■□□□□ 9.8
PSMD11-206ENST00000578213 BICC1Q9H694 974 aaKnown RBP27.85■■■□□ 2.05
PSMD11-206ENST00000578213 TTLL6Q8N841 843 aa27.84■■■□□ 2.05
PSMD11-206ENST00000578213 LRRFIP2Q9Y608 721 aaKnown RBP27.84■■■□□ 2.05
PSMD11-206ENST00000578213 EPHA10Q5JZY3 1008 aa27.83■■■□□ 2.05
PSMD11-206ENST00000578213 LMBR1LQ6UX01 489 aa27.83■■■□□ 2.05
PSMD11-206ENST00000578213 GRAPQ13588 217 aa27.82■■■□□ 2.04
PSMD11-206ENST00000578213 TMC4Q7Z404 712 aa27.82■■■□□ 2.04
PSMD11-206ENST00000578213 ANKRD44Q8N8A2 993 aa27.82■■■□□ 2.04
PSMD11-206ENST00000578213 GRAPLQ8TC17 118 aaPredicted RBP27.82■■■□□ 2.04
PSMD11-206ENST00000578213 CDC5LQ99459 802 aaKnown RBP27.82■■■□□ 2.04
PSMD11-206ENST00000578213 GREM2Q9H772 168 aa27.82■■■□□ 2.04
PSMD11-206ENST00000578213 FAM161AQ3B820 660 aa27.81■■■□□ 2.04
PSMD11-206ENST00000578213 DALRD3Q5D0E6 543 aaKnown RBP27.81■■■□□ 2.04
PSMD11-206ENST00000578213 MTX1Q13505 466 aa27.8■■■□□ 2.04
PSMD11-206ENST00000578213 PRPF40BQ6NWY9 871 aaKnown RBP27.8■■■□□ 2.04
PSMD11-206ENST00000578213 ZBTB40Q9NUA8 1239 aa27.8■■■□□ 2.04
PSMD11-206ENST00000578213 GOLGB1Q14789 3259 aaKnown RBP27.79■■■□□ 2.04
PSMD11-206ENST00000578213 FER1L6Q2WGJ9 1857 aa27.79■■■□□ 2.04
PSMD11-206ENST00000578213 BBOX1O75936 387 aa27.79■■■□□ 2.04
PSMD11-206ENST00000578213 ITGA6P23229 1130 aa27.79■■■□□ 2.04
PSMD11-206ENST00000578213 IFIT5Q13325 482 aaKnown RBP27.79■■■□□ 2.04
PSMD11-206ENST00000578213 AAMPQ13685 434 aa27.79■■■□□ 2.04
PSMD11-206ENST00000578213 CHMP3Q9Y3E7 222 aa27.79■■■□□ 2.04
PSMD11-206ENST00000578213 A0A1B0GUL6 1792 aa27.78■■■□□ 2.04
PSMD11-206ENST00000578213 ANKRD18BA2A2Z9 1011 aa27.78■■■□□ 2.04
PSMD11-206ENST00000578213 CCDC57Q2TAC2 916 aa27.78■■■□□ 2.04
PSMD11-206ENST00000578213 CCDC85AQ96PX6 553 aaPredicted RBP27.78■■■□□ 2.04
PSMD11-206ENST00000578213 COL4A1P02462 1669 aa27.78■■■□□ 2.04
PSMD11-206ENST00000578213 RPS8P62241 208 aaKnown RBP27.76■■■□□ 2.03
PSMD11-206ENST00000578213 SOGA3Q5TF21 947 aa27.76■■■□□ 2.03
PSMD11-206ENST00000578213 ANKRD18AQ8IVF6 992 aa27.76■■■□□ 2.03
PSMD11-206ENST00000578213 SEC31BQ9NQW1 1179 aa27.76■■■□□ 2.03
PSMD11-206ENST00000578213 PPEF1O14829 653 aaPredicted RBP27.75■■■□□ 2.03
PSMD11-206ENST00000578213 CC2D2BQ6DHV5 1058 aa27.75■■■□□ 2.03
PSMD11-206ENST00000578213 CELF1Q92879 486 aaKnown RBP27.75■■■□□ 2.03
PSMD11-206ENST00000578213 CRBNQ96SW2 442 aa27.75■■■□□ 2.03
PSMD11-206ENST00000578213 BCS1LQ9Y276 419 aa27.75■■■□□ 2.03
PSMD11-206ENST00000578213 IGHMBP2P38935 993 aaKnown RBP27.74■■■□□ 2.03
PSMD11-206ENST00000578213 GRIPAP1Q4V328 841 aa27.73■■■□□ 2.03
PSMD11-206ENST00000578213 TMX4Q9H1E5 349 aaPredicted RBP27.73■■■□□ 2.03
PSMD11-206ENST00000578213 LTBP1Q14766 1721 aa27.72■■■□□ 2.03
PSMD11-206ENST00000578213 TAF7LQ5H9L4 462 aa27.72■■■□□ 2.03
PSMD11-206ENST00000578213 C7orf43Q8WVR3 580 aa27.72■■■□□ 2.03
PSMD11-206ENST00000578213 C1orf115Q9H7X2 142 aa27.72■■■□□ 2.03
PSMD11-206ENST00000578213 ATP6V0A2Q9Y487 856 aa27.72■■■□□ 2.03
PSMD11-206ENST00000578213 SRGAP3O43295 1099 aa27.71■■■□□ 2.03
PSMD11-206ENST00000578213 RPAP2Q8IXW5 612 aaPredicted RBP27.71■■■□□ 2.03
PSMD11-206ENST00000578213 SP8Q8IXZ3 490 aa27.71■■■□□ 2.03
PSMD11-206ENST00000578213 MPHOSPH8Q99549 860 aa27.71■■■□□ 2.03
PSMD11-206ENST00000578213 BSDC1Q9NW68 430 aaPredicted RBP27.71■■■□□ 2.03
PSMD11-206ENST00000578213 CEP85Q6P2H3 762 aa27.7■■■□□ 2.02
PSMD11-206ENST00000578213 FBXO3Q9UK99 471 aa27.7■■■□□ 2.02
PSMD11-206ENST00000578213 RFX5P48382 616 aaPredicted RBP27.69■■■□□ 2.02
PSMD11-206ENST00000578213 ATP8B2P98198 1209 aa27.69■■■□□ 2.02
PSMD11-206ENST00000578213 CCDC93Q567U6 631 aa27.69■■■□□ 2.02
PSMD11-206ENST00000578213 CCDC88AQ3V6T2 1871 aa27.69■■■□□ 2.02
PSMD11-206ENST00000578213 SNED1Q8TER0 1413 aa27.68■■■□□ 2.02
PSMD11-206ENST00000578213 SBF1O95248 1867 aa27.68■■■□□ 2.02
PSMD11-206ENST00000578213 SSH3Q8TE77 659 aa27.68■■■□□ 2.02
PSMD11-206ENST00000578213 WWC3Q9ULE0 1092 aa27.68■■■□□ 2.02
PSMD11-206ENST00000578213 DCAF8L1A6NGE4 600 aa27.67■■■□□ 2.02
PSMD11-206ENST00000578213 C21orf2O43822 256 aa27.67■■■□□ 2.02
PSMD11-206ENST00000578213 GRIN3BO60391 1043 aa27.67■■■□□ 2.02
PSMD11-206ENST00000578213 GPR162Q16538 588 aa27.67■■■□□ 2.02
PSMD11-206ENST00000578213 COPRSQ9NQ92 184 aa27.67■■■□□ 2.02
PSMD11-206ENST00000578213 DICER1Q9UPY3 1922 aaKnown RBP27.67■■■□□ 2.02
PSMD11-206ENST00000578213 PNMA6EA0A0J9YXQ4 647 aa27.66■■■□□ 2.02
PSMD11-206ENST00000578213 HMMRO75330 724 aa27.66■■■□□ 2.02
PSMD11-206ENST00000578213 YBX3P16989 372 aaKnown RBP eCLIP27.66■■■□□ 2.02
PSMD11-206ENST00000578213 PTPN12Q05209 780 aaKnown RBP27.66■■■□□ 2.02
PSMD11-206ENST00000578213 POLA2Q14181 598 aa27.66■■■□□ 2.02
PSMD11-206ENST00000578213 LDHAL6AQ6ZMR3 332 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms