RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
CCDC57-211ENST00000578187 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
CCDC57-211ENST00000578187 E9PSI1 815 aa16.4■□□□□ 0.22
CCDC57-211ENST00000578187 VAMP4O75379 141 aa16.4■□□□□ 0.22
CCDC57-211ENST00000578187 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
CCDC57-211ENST00000578187 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
CCDC57-211ENST00000578187 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
CCDC57-211ENST00000578187 VPS33BQ9H267 617 aa16.4■□□□□ 0.22
CCDC57-211ENST00000578187 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
CCDC57-211ENST00000578187 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
CCDC57-211ENST00000578187 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
CCDC57-211ENST00000578187 SNED1Q8TER0 1413 aa16.39■□□□□ 0.21
CCDC57-211ENST00000578187 BBOX1O75936 387 aa16.39■□□□□ 0.21
CCDC57-211ENST00000578187 EPHX2P34913 555 aa16.39■□□□□ 0.21
CCDC57-211ENST00000578187 ANKRD13DQ6ZTN6 518 aa16.39■□□□□ 0.21
CCDC57-211ENST00000578187 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
CCDC57-211ENST00000578187 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
CCDC57-211ENST00000578187 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
CCDC57-211ENST00000578187 SLFN5Q08AF3 891 aa16.38■□□□□ 0.21
CCDC57-211ENST00000578187 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
CCDC57-211ENST00000578187 ABCC4O15439 1325 aa16.38■□□□□ 0.21
CCDC57-211ENST00000578187 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
CCDC57-211ENST00000578187 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
CCDC57-211ENST00000578187 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
CCDC57-211ENST00000578187 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
CCDC57-211ENST00000578187 C3orf67Q6ZVT6 689 aa16.37■□□□□ 0.21
CCDC57-211ENST00000578187 TMC4Q7Z404 712 aa16.37■□□□□ 0.21
CCDC57-211ENST00000578187 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
CCDC57-211ENST00000578187 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-211ENST00000578187 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
CCDC57-211ENST00000578187 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
CCDC57-211ENST00000578187 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
CCDC57-211ENST00000578187 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
CCDC57-211ENST00000578187 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-211ENST00000578187 DDX58O95786 925 aaKnown RBP16.35■□□□□ 0.21
CCDC57-211ENST00000578187 GRAPQ13588 217 aa16.35■□□□□ 0.21
CCDC57-211ENST00000578187 MPNDQ8N594 471 aa16.35■□□□□ 0.21
CCDC57-211ENST00000578187 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-211ENST00000578187 AOC3Q16853 763 aa16.34■□□□□ 0.21
CCDC57-211ENST00000578187 G2E3Q7L622 706 aa16.34■□□□□ 0.21
CCDC57-211ENST00000578187 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
CCDC57-211ENST00000578187 TMEM88BA6NKF7 163 aa16.33■□□□□ 0.2
CCDC57-211ENST00000578187 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
CCDC57-211ENST00000578187 PASKQ96RG2 1323 aa16.33■□□□□ 0.2
CCDC57-211ENST00000578187 ATP5J2-PTCD1G3V325 749 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 MYH3P11055 1940 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC57-211ENST00000578187 FLIIQ13045 1269 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 KSR2Q6VAB6 950 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 ADAMTSL1Q8N6G6 1762 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
CCDC57-211ENST00000578187 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
CCDC57-211ENST00000578187 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
CCDC57-211ENST00000578187 COL4A5P29400 1685 aa16.31■□□□□ 0.2
CCDC57-211ENST00000578187 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
CCDC57-211ENST00000578187 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
CCDC57-211ENST00000578187 MAP3K2Q9Y2U5 619 aa16.31■□□□□ 0.2
CCDC57-211ENST00000578187 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
CCDC57-211ENST00000578187 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
CCDC57-211ENST00000578187 ITGBL1O95965 494 aaPredicted RBP16.3■□□□□ 0.2
CCDC57-211ENST00000578187 HSPA1AP0DMV8 641 aaKnown RBP16.3■□□□□ 0.2
CCDC57-211ENST00000578187 HSPA1BP0DMV9 641 aaKnown RBP16.3■□□□□ 0.2
CCDC57-211ENST00000578187 KIAA2012Q0VF49 1180 aa16.3■□□□□ 0.2
CCDC57-211ENST00000578187 TNIP1Q15025 636 aa16.3■□□□□ 0.2
CCDC57-211ENST00000578187 MAP1SQ66K74 1059 aaPredicted RBP16.3■□□□□ 0.2
CCDC57-211ENST00000578187 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
CCDC57-211ENST00000578187 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
CCDC57-211ENST00000578187 MYD88Q99836 296 aa16.3■□□□□ 0.2
CCDC57-211ENST00000578187 IRS4O14654 1257 aaPredicted RBP16.29■□□□□ 0.2
CCDC57-211ENST00000578187 SCNN1DP51172 638 aa16.29■□□□□ 0.2
CCDC57-211ENST00000578187 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
CCDC57-211ENST00000578187 SF3B3Q15393 1217 aaKnown RBP16.29■□□□□ 0.2
CCDC57-211ENST00000578187 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
CCDC57-211ENST00000578187 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
CCDC57-211ENST00000578187 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
CCDC57-211ENST00000578187 ZBED9Q6R2W3 1325 aa16.28■□□□□ 0.2
CCDC57-211ENST00000578187 CDHR2Q9BYE9 1310 aa16.28■□□□□ 0.2
CCDC57-211ENST00000578187 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-211ENST00000578187 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
CCDC57-211ENST00000578187 EPS15P42566 896 aa16.28■□□□□ 0.2
CCDC57-211ENST00000578187 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-211ENST00000578187 CIAPIN1Q6FI81 312 aa16.28■□□□□ 0.2
CCDC57-211ENST00000578187 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-211ENST00000578187 ADARB2Q9NS39 739 aaKnown RBP16.28■□□□□ 0.2
CCDC57-211ENST00000578187 TAF1P21675 1872 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 CXCL9Q07325 125 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 SLC51AQ86UW1 340 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 AIDAQ96BJ3 306 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 EYA3Q99504 573 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 GPRC5DQ9NZD1 345 aa16.27■□□□□ 0.2
CCDC57-211ENST00000578187 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
CCDC57-211ENST00000578187 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.2
CCDC57-211ENST00000578187 LTBP1Q14766 1721 aa16.27■□□□□ 0.19
CCDC57-211ENST00000578187 PCNTO95613 3336 aa16.26■□□□□ 0.19
CCDC57-211ENST00000578187 NEXNQ0ZGT2 675 aa16.26■□□□□ 0.19
CCDC57-211ENST00000578187 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms