RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CAPN15O75808 1086 aa14.68□□□□□ -0.06
SMARCE1-214ENST00000578112 EPS15P42566 896 aa14.68□□□□□ -0.06
SMARCE1-214ENST00000578112 PLBD2Q8NHP8 589 aa14.68□□□□□ -0.06
SMARCE1-214ENST00000578112 DPF2Q92785 391 aa14.68□□□□□ -0.06
SMARCE1-214ENST00000578112 CAPNS2Q96L46 248 aa14.68□□□□□ -0.06
SMARCE1-214ENST00000578112 BEGAINQ9BUH8 593 aa14.68□□□□□ -0.06
SMARCE1-214ENST00000578112 MYBBP1AQ9BQG0 1328 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-214ENST00000578112 RPS12P25398 132 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 TRIM28Q13263 835 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 SF3B3Q15393 1217 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 THUMPD2Q9BTF0 503 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 DUOX1Q9NRD9 1551 aa14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 CXCL9Q07325 125 aa14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 AOC3Q16853 763 aa14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 C3orf67Q6ZVT6 689 aa14.67□□□□□ -0.06
SMARCE1-214ENST00000578112 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 XAGE3Q8WTP9 111 aa14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 RUNDC1Q96C34 613 aa14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 LBX1P52954 281 aa14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 EYA3Q99504 573 aa14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 ISCA1Q9BUE6 129 aa14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 HYPKQ9NX55 129 aa14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 TRMT112Q9UI30 125 aaKnown RBP14.66□□□□□ -0.06
SMARCE1-214ENST00000578112 EIF2S2P20042 333 aaKnown RBP14.65□□□□□ -0.06
SMARCE1-214ENST00000578112 CDC37L1Q7L3B6 337 aa14.65□□□□□ -0.06
SMARCE1-214ENST00000578112 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
SMARCE1-214ENST00000578112 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-214ENST00000578112 GMPSP49915 693 aaPredicted RBP14.65□□□□□ -0.07
SMARCE1-214ENST00000578112 BRPF1P55201 1214 aaPredicted RBP14.65□□□□□ -0.07
SMARCE1-214ENST00000578112 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.07
SMARCE1-214ENST00000578112 H7C1D1 291 aa14.64□□□□□ -0.07
SMARCE1-214ENST00000578112 CST9Q5W186 159 aa14.64□□□□□ -0.07
SMARCE1-214ENST00000578112 GPR101Q96P66 508 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-214ENST00000578112 PROSER3Q2NL68 480 aa14.63□□□□□ -0.07
SMARCE1-214ENST00000578112 BCL2L13Q9BXK5 485 aa14.63□□□□□ -0.07
SMARCE1-214ENST00000578112 SAPCD2Q86UD0 394 aa14.62□□□□□ -0.07
SMARCE1-214ENST00000578112 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
SMARCE1-214ENST00000578112 HDGFL1Q5TGJ6 251 aa14.62□□□□□ -0.07
SMARCE1-214ENST00000578112 ANKRD13DQ6ZTN6 518 aa14.62□□□□□ -0.07
SMARCE1-214ENST00000578112 ABHD8Q96I13 439 aa14.62□□□□□ -0.07
SMARCE1-214ENST00000578112 CFAP44Q96MT7 982 aa14.62□□□□□ -0.07
SMARCE1-214ENST00000578112 PSME4Q14997 1843 aa14.62□□□□□ -0.07
SMARCE1-214ENST00000578112 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
SMARCE1-214ENST00000578112 RGS19P49795 217 aa14.61□□□□□ -0.07
SMARCE1-214ENST00000578112 MMP14P50281 582 aa14.61□□□□□ -0.07
SMARCE1-214ENST00000578112 NOGQ13253 232 aa14.61□□□□□ -0.07
SMARCE1-214ENST00000578112 WDR43Q15061 677 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMARCE1-214ENST00000578112 SAGE1Q9NXZ1 904 aa14.61□□□□□ -0.07
SMARCE1-214ENST00000578112 CELF2O95319 508 aaKnown RBP14.6□□□□□ -0.07
SMARCE1-214ENST00000578112 HCLS1P14317 486 aaPredicted RBP14.6□□□□□ -0.07
SMARCE1-214ENST00000578112 CNOT7Q9UIV1 285 aaKnown RBP14.6□□□□□ -0.07
SMARCE1-214ENST00000578112 TRIM35Q9UPQ4 493 aa14.6□□□□□ -0.07
SMARCE1-214ENST00000578112 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
SMARCE1-214ENST00000578112 CYP4F22Q6NT55 531 aa14.59□□□□□ -0.07
SMARCE1-214ENST00000578112 CHPF2Q9P2E5 772 aa14.59□□□□□ -0.07
SMARCE1-214ENST00000578112 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-214ENST00000578112 PAXIP1Q6ZW49 1069 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-214ENST00000578112 YDJCA8MPS7 323 aa14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 TRAF5O00463 557 aa14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 ZBTB38Q8NAP3 1195 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 IFT57Q9NWB7 429 aa14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 TCERG1O14776 1098 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 ZNF853P0CG23 659 aa14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 CCDC102AQ96A19 550 aa14.58□□□□□ -0.08
SMARCE1-214ENST00000578112 ANXA1P04083 346 aa14.57□□□□□ -0.08
SMARCE1-214ENST00000578112 MICALL2Q8IY33 904 aa14.57□□□□□ -0.08
SMARCE1-214ENST00000578112 GLIS2Q9BZE0 524 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-214ENST00000578112 RAD17O75943 681 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 HIRAP54198 1017 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 GNAI1P63096 354 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 FKBP1BP68106 108 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 CCDC191Q8NCU4 936 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 IRS4O14654 1257 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 RPS8P62241 208 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 DUSP27Q5VZP5 1158 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 AGBL3Q8NEM8 1001 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 TRPM4Q8TD43 1214 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 PITPNM2Q9BZ72 1349 aa14.56□□□□□ -0.08
SMARCE1-214ENST00000578112 PCCAP05165 728 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 VIL1P09327 827 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 DCPSQ96C86 337 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 PSMD14O00487 310 aa14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 ECE2O60344 883 aa14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 DDX58O95786 925 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 CCDC152Q4G0S7 254 aa14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 C2orf69Q8N8R5 385 aa14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 TBC1D16Q8TBP0 767 aa14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 RTL9Q8NET4 1388 aa14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 PAPPA2Q9BXP8 1791 aa14.55□□□□□ -0.08
SMARCE1-214ENST00000578112 ZNF280AP59817 542 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 GPSM2P81274 684 aa14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 CELF1Q92879 486 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 NSFL1CQ9UNZ2 370 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 PDE8AO60658 829 aa14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 RGMBQ6NW40 437 aa14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 ZC3H12CQ9C0D7 883 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 GBA2Q9HCG7 927 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-214ENST00000578112 TAF1P21675 1872 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms