RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 STAP2Q9UGK3 403 aa22.83■■□□□ 1.25
PRKCA-203ENST00000578063 LAMB2P55268 1798 aa22.83■■□□□ 1.25
PRKCA-203ENST00000578063 MYH3P11055 1940 aa22.82■■□□□ 1.24
PRKCA-203ENST00000578063 CIAO1O76071 339 aa22.82■■□□□ 1.24
PRKCA-203ENST00000578063 BICDL1Q6ZP65 573 aa22.81■■□□□ 1.24
PRKCA-203ENST00000578063 EYA2O00167 538 aa22.8■■□□□ 1.24
PRKCA-203ENST00000578063 GSPT1P15170 499 aaKnown RBP22.8■■□□□ 1.24
PRKCA-203ENST00000578063 IL15P40933 162 aaPredicted RBP22.8■■□□□ 1.24
PRKCA-203ENST00000578063 ANKRD18BA2A2Z9 1011 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 HCLS1P14317 486 aaPredicted RBP22.79■■□□□ 1.24
PRKCA-203ENST00000578063 TAF7LQ5H9L4 462 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 NUTM1Q86Y26 1132 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 AKT1S1Q96B36 256 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 GREM2Q9H772 168 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 RBM19Q9Y4C8 960 aaKnown RBP22.79■■□□□ 1.24
PRKCA-203ENST00000578063 DDX60Q8IY21 1712 aaKnown RBP22.79■■□□□ 1.24
PRKCA-203ENST00000578063 CARMIL3Q8ND23 1372 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 RTL9Q8NET4 1388 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 IFIT2P09913 472 aaKnown RBP22.79■■□□□ 1.24
PRKCA-203ENST00000578063 ITGA6P23229 1130 aa22.79■■□□□ 1.24
PRKCA-203ENST00000578063 CCDC85AQ96PX6 553 aaPredicted RBP22.79■■□□□ 1.24
PRKCA-203ENST00000578063 TTC41PQ6P2S7 1318 aa22.78■■□□□ 1.24
PRKCA-203ENST00000578063 SF3B2Q13435 895 aaKnown RBP22.78■■□□□ 1.24
PRKCA-203ENST00000578063 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
PRKCA-203ENST00000578063 AACSQ86V21 672 aa22.78■■□□□ 1.24
PRKCA-203ENST00000578063 NBPF5PQ86XG9 351 aaPredicted RBP22.78■■□□□ 1.24
PRKCA-203ENST00000578063 GPATCH3Q96I76 525 aa22.78■■□□□ 1.24
PRKCA-203ENST00000578063 TFCP2L1Q9NZI6 479 aa22.78■■□□□ 1.24
PRKCA-203ENST00000578063 GTF2E1P29083 439 aaPredicted RBP22.77■■□□□ 1.24
PRKCA-203ENST00000578063 CCDC152Q4G0S7 254 aa22.77■■□□□ 1.24
PRKCA-203ENST00000578063 ATG9AQ7Z3C6 839 aa22.77■■□□□ 1.24
PRKCA-203ENST00000578063 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
PRKCA-203ENST00000578063 ZNF594Q96JF6 807 aaPredicted RBP22.77■■□□□ 1.24
PRKCA-203ENST00000578063 TFCP2Q12800 502 aa22.77■■□□□ 1.23
PRKCA-203ENST00000578063 ERFEQ4G0M1 354 aa22.77■■□□□ 1.23
PRKCA-203ENST00000578063 SLC10A5Q5PT55 438 aa22.77■■□□□ 1.23
PRKCA-203ENST00000578063 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.23
PRKCA-203ENST00000578063 GYS1P13807 737 aa22.76■■□□□ 1.23
PRKCA-203ENST00000578063 EAF2Q96CJ1 260 aaPredicted RBP22.76■■□□□ 1.23
PRKCA-203ENST00000578063 LRP5O75197 1615 aa22.76■■□□□ 1.23
PRKCA-203ENST00000578063 NFIXQ14938 502 aa22.75■■□□□ 1.23
PRKCA-203ENST00000578063 TNNI3KQ59H18 835 aa22.75■■□□□ 1.23
PRKCA-203ENST00000578063 GPR108Q9NPR9 543 aa22.75■■□□□ 1.23
PRKCA-203ENST00000578063 FPGT-TNNI3KV9GXZ4 949 aa22.75■■□□□ 1.23
PRKCA-203ENST00000578063 LRRC24Q50LG9 513 aa22.74■■□□□ 1.23
PRKCA-203ENST00000578063 TSHZ3Q63HK5 1081 aa22.74■■□□□ 1.23
PRKCA-203ENST00000578063 CAMKK2Q96RR4 588 aa22.74■■□□□ 1.23
PRKCA-203ENST00000578063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.74■■□□□ 1.23
PRKCA-203ENST00000578063 ABCC12Q96J65 1359 aa22.74■■□□□ 1.23
PRKCA-203ENST00000578063 ERC2O15083 957 aa22.74■■□□□ 1.23
PRKCA-203ENST00000578063 EN1Q05925 392 aaPredicted RBP22.74■■□□□ 1.23
PRKCA-203ENST00000578063 ECHDC1Q9NTX5 307 aa22.74■■□□□ 1.23
PRKCA-203ENST00000578063 CDC45O75419 566 aa22.73■■□□□ 1.23
PRKCA-203ENST00000578063 SDSP20132 328 aa22.73■■□□□ 1.23
PRKCA-203ENST00000578063 SF3B3Q15393 1217 aaKnown RBP22.73■■□□□ 1.23
PRKCA-203ENST00000578063 PI4K2BQ8TCG2 481 aa22.73■■□□□ 1.23
PRKCA-203ENST00000578063 GLRX3O76003 335 aaKnown RBP22.72■■□□□ 1.23
PRKCA-203ENST00000578063 BAG6P46379 1132 aa22.72■■□□□ 1.23
PRKCA-203ENST00000578063 EZH2Q15910 746 aaKnown RBP22.72■■□□□ 1.23
PRKCA-203ENST00000578063 LDHAL6AQ6ZMR3 332 aa22.72■■□□□ 1.23
PRKCA-203ENST00000578063 PUS3Q9BZE2 481 aaKnown RBP22.72■■□□□ 1.23
PRKCA-203ENST00000578063 CEP126Q9P2H0 1117 aa22.72■■□□□ 1.23
PRKCA-203ENST00000578063 CCDC8Q9H0W5 538 aaPredicted RBP22.71■■□□□ 1.23
PRKCA-203ENST00000578063 ZNF609O15014 1411 aa22.71■■□□□ 1.23
PRKCA-203ENST00000578063 CNNM1Q9NRU3 951 aa22.71■■□□□ 1.23
PRKCA-203ENST00000578063 NPHP1O15259 732 aa22.7■■□□□ 1.22
PRKCA-203ENST00000578063 CNBD1Q8NA66 436 aa22.7■■□□□ 1.22
PRKCA-203ENST00000578063 AKAP2Q9Y2D5 859 aa22.7■■□□□ 1.22
PRKCA-203ENST00000578063 RIPOR2Q9Y4F9 1068 aa22.7■■□□□ 1.22
PRKCA-203ENST00000578063 RIC1Q4ADV7 1423 aa22.7■■□□□ 1.22
PRKCA-203ENST00000578063 TUBGCP6Q96RT7 1819 aa22.69■■□□□ 1.22
PRKCA-203ENST00000578063 EIF5BO60841 1220 aaKnown RBP22.69■■□□□ 1.22
PRKCA-203ENST00000578063 TM4SF1P30408 202 aa22.69■■□□□ 1.22
PRKCA-203ENST00000578063 COL23A1Q86Y22 540 aaPredicted RBP22.69■■□□□ 1.22
PRKCA-203ENST00000578063 NLRP3Q96P20 1036 aa22.69■■□□□ 1.22
PRKCA-203ENST00000578063 CDC5LQ99459 802 aaKnown RBP22.69■■□□□ 1.22
PRKCA-203ENST00000578063 TLR7Q9NYK1 1049 aaKnown RBP22.69■■□□□ 1.22
PRKCA-203ENST00000578063 MSH5O43196 834 aa22.68■■□□□ 1.22
PRKCA-203ENST00000578063 TBC1D9Q6ZT07 1266 aa22.68■■□□□ 1.22
PRKCA-203ENST00000578063 DBNLQ9UJU6 430 aaKnown RBP22.68■■□□□ 1.22
PRKCA-203ENST00000578063 IGHMBP2P38935 993 aaKnown RBP22.68■■□□□ 1.22
PRKCA-203ENST00000578063 METTL24Q5JXM2 366 aa22.68■■□□□ 1.22
PRKCA-203ENST00000578063 CASC1Q6TDU7 716 aa22.68■■□□□ 1.22
PRKCA-203ENST00000578063 MPHOSPH8Q99549 860 aa22.68■■□□□ 1.22
PRKCA-203ENST00000578063 UPF2Q9HAU5 1272 aaKnown RBP22.68■■□□□ 1.22
PRKCA-203ENST00000578063 PNPLA7Q6ZV29 1317 aa22.67■■□□□ 1.22
PRKCA-203ENST00000578063 TRIM6-TRIM34B2RNG4 842 aa22.67■■□□□ 1.22
PRKCA-203ENST00000578063 NLGN1Q8N2Q7 840 aa22.67■■□□□ 1.22
PRKCA-203ENST00000578063 SEC31BQ9NQW1 1179 aa22.67■■□□□ 1.22
PRKCA-203ENST00000578063 STK32BQ9NY57 414 aa22.67■■□□□ 1.22
PRKCA-203ENST00000578063 MROH5Q6ZUA9 1318 aa22.67■■□□□ 1.22
PRKCA-203ENST00000578063 C3orf67Q6ZVT6 689 aa22.66■■□□□ 1.22
PRKCA-203ENST00000578063 SEC24BO95487 1268 aa22.65■■□□□ 1.22
PRKCA-203ENST00000578063 SERPINB2P05120 415 aa22.65■■□□□ 1.22
PRKCA-203ENST00000578063 SLC15A2Q16348 729 aa22.65■■□□□ 1.22
PRKCA-203ENST00000578063 CNTROBQ8N137 903 aa22.65■■□□□ 1.22
PRKCA-203ENST00000578063 A0A1B0GUL7 405 aa22.65■■□□□ 1.22
PRKCA-203ENST00000578063 ST5P78524 1137 aa22.65■■□□□ 1.22
PRKCA-203ENST00000578063 PRR5LQ6MZQ0 368 aa22.65■■□□□ 1.22
PRKCA-203ENST00000578063 DBNDD2Q9BQY9 259 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms