RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 GPTP24298 496 aa16.71■□□□□ 0.27
RNF43-202ENST00000577625 PTF1AQ7RTS3 328 aa16.71■□□□□ 0.27
RNF43-202ENST00000577625 MTERF4Q7Z6M4 381 aaKnown RBP16.71■□□□□ 0.27
RNF43-202ENST00000577625 ZBTB38Q8NAP3 1195 aaPredicted RBP16.71■□□□□ 0.27
RNF43-202ENST00000577625 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.27
RNF43-202ENST00000577625 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.27
RNF43-202ENST00000577625 SNX21Q969T3 373 aa16.7■□□□□ 0.26
RNF43-202ENST00000577625 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
RNF43-202ENST00000577625 GLRX3O76003 335 aaKnown RBP16.7■□□□□ 0.26
RNF43-202ENST00000577625 CHMLP26374 656 aa16.7■□□□□ 0.26
RNF43-202ENST00000577625 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
RNF43-202ENST00000577625 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
RNF43-202ENST00000577625 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
RNF43-202ENST00000577625 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
RNF43-202ENST00000577625 LY75O60449 1722 aa16.69■□□□□ 0.26
RNF43-202ENST00000577625 MAP4K4O95819 1239 aaPredicted RBP16.69■□□□□ 0.26
RNF43-202ENST00000577625 TAF1LQ8IZX4 1826 aa16.69■□□□□ 0.26
RNF43-202ENST00000577625 CDHR2Q9BYE9 1310 aa16.69■□□□□ 0.26
RNF43-202ENST00000577625 ESYT1Q9BSJ8 1104 aa16.68■□□□□ 0.26
RNF43-202ENST00000577625 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
RNF43-202ENST00000577625 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
RNF43-202ENST00000577625 TFCP2Q12800 502 aa16.68■□□□□ 0.26
RNF43-202ENST00000577625 FAM182BQ5T319 152 aa16.68■□□□□ 0.26
RNF43-202ENST00000577625 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
RNF43-202ENST00000577625 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
RNF43-202ENST00000577625 TRPC5Q9UL62 973 aaPredicted RBP16.68■□□□□ 0.26
RNF43-202ENST00000577625 ZSCAN30Q86W11 494 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 LINC00116Q8NCU8 138 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 TNNI3KQ59H18 835 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 FPGT-TNNI3KV9GXZ4 949 aa16.67■□□□□ 0.26
RNF43-202ENST00000577625 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
RNF43-202ENST00000577625 LAMB2P55268 1798 aa16.66■□□□□ 0.26
RNF43-202ENST00000577625 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
RNF43-202ENST00000577625 SCN7AQ01118 1682 aa16.66■□□□□ 0.26
RNF43-202ENST00000577625 CSF1RP07333 972 aa16.65■□□□□ 0.26
RNF43-202ENST00000577625 ZNF594Q96JF6 807 aaPredicted RBP16.65■□□□□ 0.26
RNF43-202ENST00000577625 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
RNF43-202ENST00000577625 UTP14CQ5TAP6 766 aaKnown RBP16.65■□□□□ 0.26
RNF43-202ENST00000577625 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
RNF43-202ENST00000577625 KCNQ4P56696 695 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 RABEP1Q15276 862 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
RNF43-202ENST00000577625 EYA2O00167 538 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
RNF43-202ENST00000577625 CIAO1O76071 339 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 PPP1R9BQ96SB3 815 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 IL25Q9H293 177 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 FAM13BQ9NYF5 915 aa16.64■□□□□ 0.25
RNF43-202ENST00000577625 CNTNAP4Q9C0A0 1308 aa16.63■□□□□ 0.25
RNF43-202ENST00000577625 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
RNF43-202ENST00000577625 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
RNF43-202ENST00000577625 ZNF609O15014 1411 aa16.63■□□□□ 0.25
RNF43-202ENST00000577625 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
RNF43-202ENST00000577625 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
RNF43-202ENST00000577625 CASZ1Q86V15 1759 aa16.62■□□□□ 0.25
RNF43-202ENST00000577625 MSNP26038 577 aaKnown RBP16.62■□□□□ 0.25
RNF43-202ENST00000577625 CTSWP56202 376 aa16.62■□□□□ 0.25
RNF43-202ENST00000577625 TTLL11Q8NHH1 800 aa16.62■□□□□ 0.25
RNF43-202ENST00000577625 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
RNF43-202ENST00000577625 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
RNF43-202ENST00000577625 QTRT2Q9H974 415 aaKnown RBP16.62■□□□□ 0.25
RNF43-202ENST00000577625 EVI5LQ96CN4 794 aa16.61■□□□□ 0.25
RNF43-202ENST00000577625 DBNDD2Q9BQY9 259 aa16.61■□□□□ 0.25
RNF43-202ENST00000577625 GPR108Q9NPR9 543 aa16.61■□□□□ 0.25
RNF43-202ENST00000577625 LRP5O75197 1615 aa16.61■□□□□ 0.25
RNF43-202ENST00000577625 SUSD4Q5VX71 490 aa16.61■□□□□ 0.25
RNF43-202ENST00000577625 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
RNF43-202ENST00000577625 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
RNF43-202ENST00000577625 SGSM2O43147 1006 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 PDE8AO60658 829 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
RNF43-202ENST00000577625 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 GREM2Q9H772 168 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 EP400Q96L91 3159 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
RNF43-202ENST00000577625 ATP5JP18859 108 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 PTMSP20962 102 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 SKOR2Q2VWA4 1001 aaPredicted RBP16.6■□□□□ 0.25
RNF43-202ENST00000577625 PARP10Q53GL7 1025 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
RNF43-202ENST00000577625 C4AP0C0L4 1744 aa16.59■□□□□ 0.25
RNF43-202ENST00000577625 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
RNF43-202ENST00000577625 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
RNF43-202ENST00000577625 K7ELQ4 463 aaPredicted RBP16.59■□□□□ 0.25
RNF43-202ENST00000577625 MCCP23508 829 aa16.59■□□□□ 0.25
RNF43-202ENST00000577625 DMTNQ08495 405 aa16.59■□□□□ 0.25
RNF43-202ENST00000577625 RC3H1Q5TC82 1133 aaKnown RBP16.59■□□□□ 0.25
RNF43-202ENST00000577625 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
RNF43-202ENST00000577625 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.25
RNF43-202ENST00000577625 ITGA6P23229 1130 aa16.58■□□□□ 0.25
RNF43-202ENST00000577625 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.25
RNF43-202ENST00000577625 CCNL1Q9UK58 526 aaPredicted RBP16.58■□□□□ 0.25
RNF43-202ENST00000577625 NIP7Q9Y221 180 aaKnown RBP eCLIP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms