RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 CSF1RP07333 972 aa25.25■■□□□ 1.63
SUPT4H1-202ENST00000577396 RLBP1P12271 317 aa25.25■■□□□ 1.63
SUPT4H1-202ENST00000577396 CTSWP56202 376 aa25.25■■□□□ 1.63
SUPT4H1-202ENST00000577396 FOXO4P98177 505 aa25.25■■□□□ 1.63
SUPT4H1-202ENST00000577396 SLX4Q8IY92 1834 aa25.25■■□□□ 1.63
SUPT4H1-202ENST00000577396 EPHA10Q5JZY3 1008 aa25.24■■□□□ 1.63
SUPT4H1-202ENST00000577396 DZIP1LQ8IYY4 767 aaKnown RBP25.24■■□□□ 1.63
SUPT4H1-202ENST00000577396 GRIN3BO60391 1043 aa25.23■■□□□ 1.63
SUPT4H1-202ENST00000577396 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
SUPT4H1-202ENST00000577396 TMEM57Q8N5G2 664 aa25.23■■□□□ 1.63
SUPT4H1-202ENST00000577396 PLIN1O60240 522 aa25.23■■□□□ 1.63
SUPT4H1-202ENST00000577396 CCDC152Q4G0S7 254 aa25.23■■□□□ 1.63
SUPT4H1-202ENST00000577396 SUCLG2Q96I99 432 aa25.23■■□□□ 1.63
SUPT4H1-202ENST00000577396 DCAF8L1A6NGE4 600 aa25.22■■□□□ 1.63
SUPT4H1-202ENST00000577396 SEC31BQ9NQW1 1179 aa25.22■■□□□ 1.63
SUPT4H1-202ENST00000577396 C21orf2O43822 256 aa25.21■■□□□ 1.63
SUPT4H1-202ENST00000577396 GRAPQ13588 217 aa25.21■■□□□ 1.63
SUPT4H1-202ENST00000577396 GRAPLQ8TC17 118 aaPredicted RBP25.21■■□□□ 1.63
SUPT4H1-202ENST00000577396 CCDC85AQ96PX6 553 aaPredicted RBP25.21■■□□□ 1.63
SUPT4H1-202ENST00000577396 ARFGEF1Q9Y6D6 1849 aa25.21■■□□□ 1.63
SUPT4H1-202ENST00000577396 BBOX1O75936 387 aa25.2■■□□□ 1.62
SUPT4H1-202ENST00000577396 CELF1Q92879 486 aaKnown RBP25.2■■□□□ 1.62
SUPT4H1-202ENST00000577396 GREM2Q9H772 168 aa25.2■■□□□ 1.62
SUPT4H1-202ENST00000577396 FTSJ3Q8IY81 847 aaKnown RBP25.19■■□□□ 1.62
SUPT4H1-202ENST00000577396 MEIS3Q99687 375 aa25.19■■□□□ 1.62
SUPT4H1-202ENST00000577396 TAF1P21675 1872 aa25.19■■□□□ 1.62
SUPT4H1-202ENST00000577396 RTL9Q8NET4 1388 aa25.19■■□□□ 1.62
SUPT4H1-202ENST00000577396 PANK1Q8TE04 598 aa25.19■■□□□ 1.62
SUPT4H1-202ENST00000577396 ZNF219Q9P2Y4 722 aaPredicted RBP25.19■■□□□ 1.62
SUPT4H1-202ENST00000577396 COL4A1P02462 1669 aa25.18■■□□□ 1.62
SUPT4H1-202ENST00000577396 LMBR1LQ6UX01 489 aa25.18■■□□□ 1.62
SUPT4H1-202ENST00000577396 OLFM4Q6UX06 510 aa25.18■■□□□ 1.62
SUPT4H1-202ENST00000577396 SLC51AQ86UW1 340 aa25.18■■□□□ 1.62
SUPT4H1-202ENST00000577396 MYH3P11055 1940 aa25.17■■□□□ 1.62
SUPT4H1-202ENST00000577396 RPS8P62241 208 aaKnown RBP25.17■■□□□ 1.62
SUPT4H1-202ENST00000577396 RABL6Q3YEC7 729 aaPredicted RBP25.17■■□□□ 1.62
SUPT4H1-202ENST00000577396 PPEF1O14829 653 aaPredicted RBP25.16■■□□□ 1.62
SUPT4H1-202ENST00000577396 MS4A1P11836 297 aa25.16■■□□□ 1.62
SUPT4H1-202ENST00000577396 ARHGAP27Q6ZUM4 889 aa25.16■■□□□ 1.62
SUPT4H1-202ENST00000577396 BICC1Q9H694 974 aaKnown RBP25.16■■□□□ 1.62
SUPT4H1-202ENST00000577396 CACNA1SQ13698 1873 aa25.16■■□□□ 1.62
SUPT4H1-202ENST00000577396 UBTFL1P0CB47 393 aaPredicted RBP25.15■■□□□ 1.62
SUPT4H1-202ENST00000577396 FAM161AQ3B820 660 aa25.15■■□□□ 1.62
SUPT4H1-202ENST00000577396 ANKRD44Q8N8A2 993 aa25.15■■□□□ 1.62
SUPT4H1-202ENST00000577396 ATP6V0A2Q9Y487 856 aa25.15■■□□□ 1.62
SUPT4H1-202ENST00000577396 ZBTB7BO15156 539 aaPredicted RBP25.15■■□□□ 1.62
SUPT4H1-202ENST00000577396 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.15■■□□□ 1.62
SUPT4H1-202ENST00000577396 SNED1Q8TER0 1413 aa25.14■■□□□ 1.61
SUPT4H1-202ENST00000577396 GNAI3P08754 354 aa25.14■■□□□ 1.61
SUPT4H1-202ENST00000577396 ITGA6P23229 1130 aa25.14■■□□□ 1.61
SUPT4H1-202ENST00000577396 PDE3AQ14432 1141 aa25.14■■□□□ 1.61
SUPT4H1-202ENST00000577396 C20orf194Q5TEA3 1177 aa25.14■■□□□ 1.61
SUPT4H1-202ENST00000577396 SOGA3Q5TF21 947 aa25.14■■□□□ 1.61
SUPT4H1-202ENST00000577396 SP8Q8IXZ3 490 aa25.14■■□□□ 1.61
SUPT4H1-202ENST00000577396 NFKBIEO00221 500 aa25.13■■□□□ 1.61
SUPT4H1-202ENST00000577396 CC2D2BQ6DHV5 1058 aa25.13■■□□□ 1.61
SUPT4H1-202ENST00000577396 TMC4Q7Z404 712 aa25.13■■□□□ 1.61
SUPT4H1-202ENST00000577396 CCDC93Q567U6 631 aa25.12■■□□□ 1.61
SUPT4H1-202ENST00000577396 ITPRIPQ8IWB1 547 aa25.12■■□□□ 1.61
SUPT4H1-202ENST00000577396 CDC5LQ99459 802 aaKnown RBP25.12■■□□□ 1.61
SUPT4H1-202ENST00000577396 ANKRD18AQ8IVF6 992 aa25.12■■□□□ 1.61
SUPT4H1-202ENST00000577396 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
SUPT4H1-202ENST00000577396 LRRFIP2Q9Y608 721 aaKnown RBP25.12■■□□□ 1.61
SUPT4H1-202ENST00000577396 IFIT5Q13325 482 aaKnown RBP25.11■■□□□ 1.61
SUPT4H1-202ENST00000577396 RTKN2Q8IZC4 609 aa25.11■■□□□ 1.61
SUPT4H1-202ENST00000577396 ANKRD18BA2A2Z9 1011 aa25.1■■□□□ 1.61
SUPT4H1-202ENST00000577396 RRP1P56182 461 aaKnown RBP25.1■■□□□ 1.61
SUPT4H1-202ENST00000577396 MVPQ14764 893 aaKnown RBP25.1■■□□□ 1.61
SUPT4H1-202ENST00000577396 COG6Q9Y2V7 657 aa25.1■■□□□ 1.61
SUPT4H1-202ENST00000577396 PRELPP51888 382 aa25.09■■□□□ 1.61
SUPT4H1-202ENST00000577396 GRIPAP1Q4V328 841 aa25.09■■□□□ 1.61
SUPT4H1-202ENST00000577396 BSDC1Q9NW68 430 aaPredicted RBP25.09■■□□□ 1.61
SUPT4H1-202ENST00000577396 CHMP3Q9Y3E7 222 aa25.09■■□□□ 1.61
SUPT4H1-202ENST00000577396 FER1L6Q2WGJ9 1857 aa25.09■■□□□ 1.61
SUPT4H1-202ENST00000577396 CCDC57Q2TAC2 916 aa25.08■■□□□ 1.61
SUPT4H1-202ENST00000577396 LTBP3Q9NS15 1303 aa25.08■■□□□ 1.61
SUPT4H1-202ENST00000577396 GNAI2P04899 355 aa25.07■■□□□ 1.6
SUPT4H1-202ENST00000577396 RASSF7Q02833 373 aa25.07■■□□□ 1.6
SUPT4H1-202ENST00000577396 ZNF594Q96JF6 807 aaPredicted RBP25.06■■□□□ 1.6
SUPT4H1-202ENST00000577396 PSMD1Q99460 953 aa25.06■■□□□ 1.6
SUPT4H1-202ENST00000577396 IGHMBP2P38935 993 aaKnown RBP25.05■■□□□ 1.6
SUPT4H1-202ENST00000577396 RFX5P48382 616 aaPredicted RBP25.05■■□□□ 1.6
SUPT4H1-202ENST00000577396 FKBP4Q02790 459 aaKnown RBP eCLIP25.05■■□□□ 1.6
SUPT4H1-202ENST00000577396 TMX4Q9H1E5 349 aaPredicted RBP25.05■■□□□ 1.6
SUPT4H1-202ENST00000577396 TAOK3Q9H2K8 898 aa25.05■■□□□ 1.6
SUPT4H1-202ENST00000577396 MINPP1Q9UNW1 487 aa25.05■■□□□ 1.6
SUPT4H1-202ENST00000577396 LRRC37AA6NMS7 1700 aa25.05■■□□□ 1.6
SUPT4H1-202ENST00000577396 MTX1Q13505 466 aa25.04■■□□□ 1.6
SUPT4H1-202ENST00000577396 MPNDQ8N594 471 aa25.04■■□□□ 1.6
SUPT4H1-202ENST00000577396 RTFDC1Q9BY42 306 aaPredicted RBP25.04■■□□□ 1.6
SUPT4H1-202ENST00000577396 DDX19BQ9UMR2 479 aa25.04■■□□□ 1.6
SUPT4H1-202ENST00000577396 GPSM2P81274 684 aa25.04■■□□□ 1.6
SUPT4H1-202ENST00000577396 MPHOSPH8Q99549 860 aa25.04■■□□□ 1.6
SUPT4H1-202ENST00000577396 ZBTB40Q9NUA8 1239 aa25.03■■□□□ 1.6
SUPT4H1-202ENST00000577396 PODXL2Q9NZ53 605 aa25.03■■□□□ 1.6
SUPT4H1-202ENST00000577396 NSFL1CQ9UNZ2 370 aaKnown RBP25.03■■□□□ 1.6
SUPT4H1-202ENST00000577396 SBF1O95248 1867 aa25.02■■□□□ 1.6
SUPT4H1-202ENST00000577396 DPP8Q6V1X1 898 aaPredicted RBP25.02■■□□□ 1.6
SUPT4H1-202ENST00000577396 LMNB1P20700 586 aa25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 LDHAL6AQ6ZMR3 332 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms