RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 CASP7P55210 303 aa24.78■■□□□ 1.56
SCO1-202ENST00000577335 NFKBIEO00221 500 aa24.77■■□□□ 1.56
SCO1-202ENST00000577335 GRM8O00222 908 aa24.77■■□□□ 1.56
SCO1-202ENST00000577335 CTSWP56202 376 aa24.77■■□□□ 1.56
SCO1-202ENST00000577335 JARID2Q92833 1246 aaPredicted RBP24.77■■□□□ 1.56
SCO1-202ENST00000577335 ATP6V0A2Q9Y487 856 aa24.77■■□□□ 1.56
SCO1-202ENST00000577335 DDX60Q8IY21 1712 aaKnown RBP24.77■■□□□ 1.56
SCO1-202ENST00000577335 CHD4Q14839 1912 aa24.76■■□□□ 1.55
SCO1-202ENST00000577335 LAMB2P55268 1798 aa24.76■■□□□ 1.55
SCO1-202ENST00000577335 TAOK3Q9H2K8 898 aa24.76■■□□□ 1.55
SCO1-202ENST00000577335 C9orf78Q9NZ63 289 aaPredicted RBP24.76■■□□□ 1.55
SCO1-202ENST00000577335 LMNB1P20700 586 aa24.75■■□□□ 1.55
SCO1-202ENST00000577335 CCT4P50991 539 aaKnown RBP24.75■■□□□ 1.55
SCO1-202ENST00000577335 RTL9Q8NET4 1388 aa24.75■■□□□ 1.55
SCO1-202ENST00000577335 SP8Q8IXZ3 490 aa24.74■■□□□ 1.55
SCO1-202ENST00000577335 TTLL11Q8NHH1 800 aa24.74■■□□□ 1.55
SCO1-202ENST00000577335 UTYO14607 1347 aa24.73■■□□□ 1.55
SCO1-202ENST00000577335 FKBP4Q02790 459 aaKnown RBP eCLIP24.73■■□□□ 1.55
SCO1-202ENST00000577335 C9orf131Q5VYM1 1079 aa24.73■■□□□ 1.55
SCO1-202ENST00000577335 PSMD1Q99460 953 aa24.73■■□□□ 1.55
SCO1-202ENST00000577335 ZC3H4Q9UPT8 1303 aaKnown RBP24.72■■□□□ 1.55
SCO1-202ENST00000577335 BCAR3O75815 825 aa24.72■■□□□ 1.55
SCO1-202ENST00000577335 CSF1RP07333 972 aa24.72■■□□□ 1.55
SCO1-202ENST00000577335 RPS8P62241 208 aaKnown RBP24.72■■□□□ 1.55
SCO1-202ENST00000577335 RASSF7Q02833 373 aa24.72■■□□□ 1.55
SCO1-202ENST00000577335 SNED1Q8TER0 1413 aa24.71■■□□□ 1.55
SCO1-202ENST00000577335 CELF1Q92879 486 aaKnown RBP24.71■■□□□ 1.55
SCO1-202ENST00000577335 CDC5LQ99459 802 aaKnown RBP24.71■■□□□ 1.55
SCO1-202ENST00000577335 RNF181Q9P0P0 153 aa24.71■■□□□ 1.55
SCO1-202ENST00000577335 ATF7IPQ6VMQ6 1270 aa24.7■■□□□ 1.54
SCO1-202ENST00000577335 OLFM4Q6UX06 510 aa24.69■■□□□ 1.54
SCO1-202ENST00000577335 SEC31BQ9NQW1 1179 aa24.69■■□□□ 1.54
SCO1-202ENST00000577335 ZKSCAN2Q63HK3 967 aa24.68■■□□□ 1.54
SCO1-202ENST00000577335 ANKRD18AQ8IVF6 992 aa24.68■■□□□ 1.54
SCO1-202ENST00000577335 FRAT1Q92837 279 aaPredicted RBP24.68■■□□□ 1.54
SCO1-202ENST00000577335 VPS33BQ9H267 617 aa24.68■■□□□ 1.54
SCO1-202ENST00000577335 FER1L6Q2WGJ9 1857 aa24.68■■□□□ 1.54
SCO1-202ENST00000577335 NBPF7P0C2Y1 421 aaPredicted RBP24.67■■□□□ 1.54
SCO1-202ENST00000577335 FOXO4P98177 505 aa24.67■■□□□ 1.54
SCO1-202ENST00000577335 INTS3Q68E01 1043 aaKnown RBP24.67■■□□□ 1.54
SCO1-202ENST00000577335 SUPT20HQ8NEM7 779 aa24.67■■□□□ 1.54
SCO1-202ENST00000577335 USP44Q9H0E7 712 aa24.67■■□□□ 1.54
SCO1-202ENST00000577335 GREM2Q9H772 168 aa24.67■■□□□ 1.54
SCO1-202ENST00000577335 HDAC5Q9UQL6 1122 aa24.67■■□□□ 1.54
SCO1-202ENST00000577335 TRIM27P14373 513 aa24.66■■□□□ 1.54
SCO1-202ENST00000577335 PRELPP51888 382 aa24.66■■□□□ 1.54
SCO1-202ENST00000577335 CCDC85AQ96PX6 553 aaPredicted RBP24.66■■□□□ 1.54
SCO1-202ENST00000577335 RTFDC1Q9BY42 306 aaPredicted RBP24.66■■□□□ 1.54
SCO1-202ENST00000577335 CACNA1SQ13698 1873 aa24.66■■□□□ 1.54
SCO1-202ENST00000577335 DPP8Q6V1X1 898 aaPredicted RBP24.65■■□□□ 1.54
SCO1-202ENST00000577335 MPNDQ8N594 471 aa24.65■■□□□ 1.54
SCO1-202ENST00000577335 ITGA6P23229 1130 aa24.64■■□□□ 1.54
SCO1-202ENST00000577335 ZNF784Q8NCA9 323 aaPredicted RBP24.64■■□□□ 1.54
SCO1-202ENST00000577335 ANKRD18BA2A2Z9 1011 aa24.63■■□□□ 1.53
SCO1-202ENST00000577335 IARSP41252 1262 aaKnown RBP24.63■■□□□ 1.53
SCO1-202ENST00000577335 IFIT5Q13325 482 aaKnown RBP24.63■■□□□ 1.53
SCO1-202ENST00000577335 FAM161AQ3B820 660 aa24.63■■□□□ 1.53
SCO1-202ENST00000577335 LMBR1LQ6UX01 489 aa24.63■■□□□ 1.53
SCO1-202ENST00000577335 SUCLG2Q96I99 432 aa24.63■■□□□ 1.53
SCO1-202ENST00000577335 ZNF277Q9NRM2 450 aaPredicted RBP24.63■■□□□ 1.53
SCO1-202ENST00000577335 BSDC1Q9NW68 430 aaPredicted RBP24.63■■□□□ 1.53
SCO1-202ENST00000577335 IGHMBP2P38935 993 aaKnown RBP24.62■■□□□ 1.53
SCO1-202ENST00000577335 EPHA10Q5JZY3 1008 aa24.62■■□□□ 1.53
SCO1-202ENST00000577335 RCAN3Q9UKA8 241 aa24.62■■□□□ 1.53
SCO1-202ENST00000577335 CCDC57Q2TAC2 916 aa24.61■■□□□ 1.53
SCO1-202ENST00000577335 RABL6Q3YEC7 729 aaPredicted RBP24.61■■□□□ 1.53
SCO1-202ENST00000577335 KAZALD1Q96I82 304 aa24.61■■□□□ 1.53
SCO1-202ENST00000577335 PODXL2Q9NZ53 605 aa24.61■■□□□ 1.53
SCO1-202ENST00000577335 SBF1O95248 1867 aa24.6■■□□□ 1.53
SCO1-202ENST00000577335 UBTFL1P0CB47 393 aaPredicted RBP24.6■■□□□ 1.53
SCO1-202ENST00000577335 NSFL1CQ9UNZ2 370 aaKnown RBP24.6■■□□□ 1.53
SCO1-202ENST00000577335 MYH3P11055 1940 aa24.6■■□□□ 1.53
SCO1-202ENST00000577335 LRRC37AA6NMS7 1700 aa24.6■■□□□ 1.53
SCO1-202ENST00000577335 MS4A1P11836 297 aa24.59■■□□□ 1.53
SCO1-202ENST00000577335 JDP2Q8WYK2 163 aa24.59■■□□□ 1.53
SCO1-202ENST00000577335 MPHOSPH8Q99549 860 aa24.59■■□□□ 1.53
SCO1-202ENST00000577335 CHMP3Q9Y3E7 222 aa24.59■■□□□ 1.53
SCO1-202ENST00000577335 GNAI3P08754 354 aa24.58■■□□□ 1.53
SCO1-202ENST00000577335 SLC51AQ86UW1 340 aa24.58■■□□□ 1.53
SCO1-202ENST00000577335 FTSJ3Q8IY81 847 aaKnown RBP24.58■■□□□ 1.53
SCO1-202ENST00000577335 YTHDC1Q96MU7 727 aaKnown RBP24.58■■□□□ 1.53
SCO1-202ENST00000577335 BICC1Q9H694 974 aaKnown RBP24.58■■□□□ 1.53
SCO1-202ENST00000577335 KDM2BQ8NHM5 1336 aa24.58■■□□□ 1.52
SCO1-202ENST00000577335 GPSM2P81274 684 aa24.57■■□□□ 1.52
SCO1-202ENST00000577335 DPY19L2Q6NUT2 758 aa24.57■■□□□ 1.52
SCO1-202ENST00000577335 DZIP1LQ8IYY4 767 aaKnown RBP24.57■■□□□ 1.52
SCO1-202ENST00000577335 LARGE2Q8N3Y3 721 aa24.57■■□□□ 1.52
SCO1-202ENST00000577335 CLUAP1Q96AJ1 413 aa24.57■■□□□ 1.52
SCO1-202ENST00000577335 ANKIB1Q9P2G1 1089 aa24.57■■□□□ 1.52
SCO1-202ENST00000577335 MINPP1Q9UNW1 487 aa24.57■■□□□ 1.52
SCO1-202ENST00000577335 XDHP47989 1333 aa24.57■■□□□ 1.52
SCO1-202ENST00000577335 COL4A1P02462 1669 aa24.56■■□□□ 1.52
SCO1-202ENST00000577335 PPIP5K2O43314 1243 aa24.56■■□□□ 1.52
SCO1-202ENST00000577335 KIAA2012Q0VF49 1180 aa24.56■■□□□ 1.52
SCO1-202ENST00000577335 ANKRD44Q8N8A2 993 aa24.56■■□□□ 1.52
SCO1-202ENST00000577335 EYA3Q99504 573 aa24.56■■□□□ 1.52
SCO1-202ENST00000577335 GPBP1L1Q9HC44 474 aaPredicted RBP24.56■■□□□ 1.52
SCO1-202ENST00000577335 GLTPD2A6NH11 291 aa24.55■■□□□ 1.52
SCO1-202ENST00000577335 TAF7LQ5H9L4 462 aa24.55■■□□□ 1.52
SCO1-202ENST00000577335 TBC1D16Q8TBP0 767 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms