RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 FZD9O00144 591 aa19.87■□□□□ 0.77
SF3B3-215ENST00000577085 SF3B3Q15393 1217 aaKnown RBP19.87■□□□□ 0.77
SF3B3-215ENST00000577085 MPNDQ8N594 471 aa19.87■□□□□ 0.77
SF3B3-215ENST00000577085 PI4KAP1Q8N8J0 262 aa19.87■□□□□ 0.77
SF3B3-215ENST00000577085 LAMB2P55268 1798 aa19.87■□□□□ 0.77
SF3B3-215ENST00000577085 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
SF3B3-215ENST00000577085 POTECB2RU33 542 aa19.86■□□□□ 0.77
SF3B3-215ENST00000577085 GPC2Q8N158 579 aa19.86■□□□□ 0.77
SF3B3-215ENST00000577085 L3MBTL3Q96JM7 780 aaPredicted RBP19.86■□□□□ 0.77
SF3B3-215ENST00000577085 VPS33BQ9H267 617 aa19.86■□□□□ 0.77
SF3B3-215ENST00000577085 GJA3Q9Y6H8 435 aa19.86■□□□□ 0.77
SF3B3-215ENST00000577085 PCCAP05165 728 aaPredicted RBP19.85■□□□□ 0.77
SF3B3-215ENST00000577085 EXOSC9Q06265 439 aaKnown RBP19.85■□□□□ 0.77
SF3B3-215ENST00000577085 AOC3Q16853 763 aa19.85■□□□□ 0.77
SF3B3-215ENST00000577085 SLC51AQ86UW1 340 aa19.85■□□□□ 0.77
SF3B3-215ENST00000577085 HACL1Q9UJ83 578 aa19.85■□□□□ 0.77
SF3B3-215ENST00000577085 CEP350Q5VT06 3117 aa19.85■□□□□ 0.77
SF3B3-215ENST00000577085 FKBP5Q13451 457 aaPredicted RBP19.84■□□□□ 0.77
SF3B3-215ENST00000577085 CCDC152Q4G0S7 254 aa19.84■□□□□ 0.77
SF3B3-215ENST00000577085 DDX60Q8IY21 1712 aaKnown RBP19.84■□□□□ 0.77
SF3B3-215ENST00000577085 PDE8AO60658 829 aa19.83■□□□□ 0.77
SF3B3-215ENST00000577085 LMOD1P29536 600 aaPredicted RBP19.83■□□□□ 0.77
SF3B3-215ENST00000577085 FLIIQ13045 1269 aa19.83■□□□□ 0.77
SF3B3-215ENST00000577085 EAPPQ56P03 285 aaPredicted RBP19.83■□□□□ 0.77
SF3B3-215ENST00000577085 CHADLQ6NUI6 762 aa19.83■□□□□ 0.77
SF3B3-215ENST00000577085 G2E3Q7L622 706 aa19.82■□□□□ 0.76
SF3B3-215ENST00000577085 JARID2Q92833 1246 aaPredicted RBP19.82■□□□□ 0.76
SF3B3-215ENST00000577085 CELF1Q92879 486 aaKnown RBP19.82■□□□□ 0.76
SF3B3-215ENST00000577085 RTFDC1Q9BY42 306 aaPredicted RBP19.82■□□□□ 0.76
SF3B3-215ENST00000577085 TAF1DQ9H5J8 278 aaPredicted RBP19.82■□□□□ 0.76
SF3B3-215ENST00000577085 NSFL1CQ9UNZ2 370 aaKnown RBP19.82■□□□□ 0.76
SF3B3-215ENST00000577085 CLEC11AQ9Y240 323 aa19.82■□□□□ 0.76
SF3B3-215ENST00000577085 VAMP4O75379 141 aa19.81■□□□□ 0.76
SF3B3-215ENST00000577085 EPHX2P34913 555 aa19.81■□□□□ 0.76
SF3B3-215ENST00000577085 RPS8P62241 208 aaKnown RBP19.81■□□□□ 0.76
SF3B3-215ENST00000577085 PNMA8AQ86V59 439 aaPredicted RBP19.81■□□□□ 0.76
SF3B3-215ENST00000577085 LDHDQ86WU2 507 aa19.81■□□□□ 0.76
SF3B3-215ENST00000577085 CWF19L2Q2TBE0 894 aaKnown RBP19.8■□□□□ 0.76
SF3B3-215ENST00000577085 CCDC85AQ96PX6 553 aaPredicted RBP19.8■□□□□ 0.76
SF3B3-215ENST00000577085 ZNRF3Q9ULT6 936 aa19.8■□□□□ 0.76
SF3B3-215ENST00000577085 SCN4AP35499 1836 aa19.8■□□□□ 0.76
SF3B3-215ENST00000577085 C6orf229H3BNL8 230 aa19.79■□□□□ 0.76
SF3B3-215ENST00000577085 IGKV5-2P06315 115 aa19.79■□□□□ 0.76
SF3B3-215ENST00000577085 CDHR2Q9BYE9 1310 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 NEURL1BA8MQ27 555 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 POTEIP0CG38 1075 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 POTEJP0CG39 1038 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 HTRA3P83110 453 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 WASHC4Q2M389 1173 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
SF3B3-215ENST00000577085 ANKIB1Q9P2G1 1089 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 COL4A5P29400 1685 aa19.78■□□□□ 0.76
SF3B3-215ENST00000577085 CTSWP56202 376 aa19.77■□□□□ 0.76
SF3B3-215ENST00000577085 UBE3BQ7Z3V4 1068 aa19.77■□□□□ 0.76
SF3B3-215ENST00000577085 ANKRD18AQ8IVF6 992 aa19.77■□□□□ 0.76
SF3B3-215ENST00000577085 DNAAF4Q8WXU2 420 aa19.77■□□□□ 0.76
SF3B3-215ENST00000577085 EYA3Q99504 573 aa19.77■□□□□ 0.76
SF3B3-215ENST00000577085 SEC31BQ9NQW1 1179 aa19.77■□□□□ 0.76
SF3B3-215ENST00000577085 TAF1P21675 1872 aa19.77■□□□□ 0.76
SF3B3-215ENST00000577085 GPSM2P81274 684 aa19.76■□□□□ 0.75
SF3B3-215ENST00000577085 TNIP1Q15025 636 aa19.76■□□□□ 0.75
SF3B3-215ENST00000577085 CDC5LQ99459 802 aaKnown RBP19.76■□□□□ 0.75
SF3B3-215ENST00000577085 G3V3G9 751 aa19.75■□□□□ 0.75
SF3B3-215ENST00000577085 RIMBP2O15034 1052 aa19.75■□□□□ 0.75
SF3B3-215ENST00000577085 GCKRQ14397 625 aa19.75■□□□□ 0.75
SF3B3-215ENST00000577085 DCAF8Q5TAQ9 597 aa19.75■□□□□ 0.75
SF3B3-215ENST00000577085 CIAPIN1Q6FI81 312 aa19.75■□□□□ 0.75
SF3B3-215ENST00000577085 LINS1Q8NG48 757 aa19.75■□□□□ 0.75
SF3B3-215ENST00000577085 LRRC37AA6NMS7 1700 aa19.74■□□□□ 0.75
SF3B3-215ENST00000577085 RAD17O75943 681 aa19.74■□□□□ 0.75
SF3B3-215ENST00000577085 CXCL9Q07325 125 aa19.74■□□□□ 0.75
SF3B3-215ENST00000577085 DNAJC5GQ8N7S2 189 aa19.74■□□□□ 0.75
SF3B3-215ENST00000577085 BCL2L13Q9BXK5 485 aa19.74■□□□□ 0.75
SF3B3-215ENST00000577085 SCNN1DP51172 638 aa19.73■□□□□ 0.75
SF3B3-215ENST00000577085 KLRG1Q96E93 195 aa19.73■□□□□ 0.75
SF3B3-215ENST00000577085 ZC3H12CQ9C0D7 883 aaKnown RBP19.73■□□□□ 0.75
SF3B3-215ENST00000577085 POLLQ9UGP5 575 aa19.73■□□□□ 0.75
SF3B3-215ENST00000577085 GGA1Q9UJY5 639 aa19.73■□□□□ 0.75
SF3B3-215ENST00000577085 E9PSI1 815 aa19.72■□□□□ 0.75
SF3B3-215ENST00000577085 H7C1W4 665 aa19.72■□□□□ 0.75
SF3B3-215ENST00000577085 UFL1O94874 794 aa19.72■□□□□ 0.75
SF3B3-215ENST00000577085 EPS15P42566 896 aa19.72■□□□□ 0.75
SF3B3-215ENST00000577085 TTLL11Q8NHH1 800 aa19.72■□□□□ 0.75
SF3B3-215ENST00000577085 TBC1D16Q8TBP0 767 aa19.72■□□□□ 0.75
SF3B3-215ENST00000577085 ZNF521Q96K83 1311 aa19.72■□□□□ 0.75
SF3B3-215ENST00000577085 CCER2I3L3R5 266 aa19.71■□□□□ 0.75
SF3B3-215ENST00000577085 GMPSP49915 693 aaPredicted RBP19.71■□□□□ 0.75
SF3B3-215ENST00000577085 USP50Q70EL3 339 aaPredicted RBP19.71■□□□□ 0.75
SF3B3-215ENST00000577085 GREM2Q9H772 168 aa19.71■□□□□ 0.75
SF3B3-215ENST00000577085 DBNDD1Q9H9R9 158 aa19.71■□□□□ 0.75
SF3B3-215ENST00000577085 GPRC5DQ9NZD1 345 aa19.71■□□□□ 0.75
SF3B3-215ENST00000577085 CACNA1FO60840 1977 aa19.71■□□□□ 0.75
SF3B3-215ENST00000577085 DUOX1Q9NRD9 1551 aa19.7■□□□□ 0.74
SF3B3-215ENST00000577085 F6X3S4 739 aa19.7■□□□□ 0.74
SF3B3-215ENST00000577085 IGHMBP2P38935 993 aaKnown RBP19.7■□□□□ 0.74
SF3B3-215ENST00000577085 MAP1SQ66K74 1059 aaPredicted RBP19.7■□□□□ 0.74
SF3B3-215ENST00000577085 CNTROBQ8N137 903 aa19.7■□□□□ 0.74
SF3B3-215ENST00000577085 ADARB2Q9NS39 739 aaKnown RBP19.7■□□□□ 0.74
SF3B3-215ENST00000577085 PODXL2Q9NZ53 605 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms