RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SYKP43405 635 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 MRPS27Q92552 414 aaKnown RBP20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 DACH1Q9UI36 760 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 MBD5Q9P267 1494 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 TXLNAP40222 546 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 PTH1RQ03431 593 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 CCDC12Q8WUD4 166 aaPredicted RBP20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 USP44Q9H0E7 712 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 DEF6Q9H4E7 631 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 ZNHIT6Q9NWK9 470 aaKnown RBP20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 TIMM10P62072 90 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 AMOTL1Q8IY63 956 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 ZHX3Q9H4I2 956 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 HMG20BQ9P0W2 317 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 PTPDC1A2A3K4 754 aa20.72■□□□□ 0.91
ATPAF1-214ENST00000576409 EIF5P55010 431 aaKnown RBP20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 BMS1Q14692 1282 aaKnown RBP20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 JAKMIP3Q5VZ66 844 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 ZNF500O60304 480 aaPredicted RBP20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 HSPA4P34932 840 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 ME3Q16798 604 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 GOLGA8AA7E2F4 631 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 SLU7O95391 586 aaKnown RBP20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 SLC26A6Q9BXS9 759 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 RAD50Q92878 1312 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 IARSP41252 1262 aaKnown RBP20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 SLC4A8Q2Y0W8 1093 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 AMOTQ4VCS5 1084 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 KCNH5Q8NCM2 988 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
ATPAF1-214ENST00000576409 ENOX2Q16206 610 aaKnown RBP20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 MCMDC2Q4G0Z9 681 aa20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 ERVK-7P63135 1459 aa20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 EIF3JO75822 258 aaKnown RBP20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 SSBP05455 408 aaKnown RBP eCLIP20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 TFCP2Q12800 502 aa20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 PYCARDQ9ULZ3 195 aa20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 SLC12A7Q9Y666 1083 aa20.7■□□□□ 0.9
ATPAF1-214ENST00000576409 SBNO2Q9Y2G9 1366 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 KIF5CO60282 957 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 AFMP43652 599 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 KIAA1328Q86T90 577 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 SLC27A2O14975 620 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 PHACTR2O75167 634 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 KARSQ15046 597 aaKnown RBP20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 CCDC102BQ68D86 513 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 LDHAL6AQ6ZMR3 332 aa20.69■□□□□ 0.9
ATPAF1-214ENST00000576409 ADCK5Q3MIX3 580 aa20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 LINS1Q8NG48 757 aa20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 NRBP1Q9UHY1 535 aa20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 LEO1Q8WVC0 666 aaPredicted RBP20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 IQSEC3Q9UPP2 1182 aaPredicted RBP20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 YTHDC2Q9H6S0 1430 aaKnown RBP20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 EPS15P42566 896 aa20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 NFATC2IPQ8NCF5 419 aa20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 ANKRD24Q8TF21 1146 aa20.68■□□□□ 0.9
ATPAF1-214ENST00000576409 KCNQ3O43525 872 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 CCDC181Q5TID7 509 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 METAP2P50579 478 aaKnown RBP eCLIP20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 TTC6Q86TZ1 520 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 ALG1Q9BT22 464 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 SPTLC2O15270 562 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 STX17P56962 302 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 ELF2Q15723 593 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 TMEM67Q5HYA8 995 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 TAF3Q5VWG9 929 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 ZSCAN25Q6NSZ9 544 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 ATP2B2Q01814 1243 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 NUP88Q99567 741 aaPredicted RBP20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 CALCOCO1Q9P1Z2 691 aa20.67■□□□□ 0.9
ATPAF1-214ENST00000576409 CAVIN2O95810 425 aa20.66■□□□□ 0.9
ATPAF1-214ENST00000576409 BICDL1Q6ZP65 573 aa20.66■□□□□ 0.9
ATPAF1-214ENST00000576409 TTC41PQ6P2S7 1318 aa20.66■□□□□ 0.9
ATPAF1-214ENST00000576409 ABCC1P33527 1531 aa20.66■□□□□ 0.9
ATPAF1-214ENST00000576409 DBNDD2Q9BQY9 259 aa20.66■□□□□ 0.9
ATPAF1-214ENST00000576409 UGGT1Q9NYU2 1555 aa20.66■□□□□ 0.9
ATPAF1-214ENST00000576409 BBXQ8WY36 941 aaPredicted RBP20.65■□□□□ 0.9
ATPAF1-214ENST00000576409 CDK5RAP3Q96JB5 506 aa20.65■□□□□ 0.9
ATPAF1-214ENST00000576409 ZNF75DP51815 510 aa20.65■□□□□ 0.9
ATPAF1-214ENST00000576409 SMAP1Q8IYB5 467 aaPredicted RBP20.65■□□□□ 0.9
ATPAF1-214ENST00000576409 LZTFL1Q9NQ48 299 aa20.65■□□□□ 0.9
ATPAF1-214ENST00000576409 MTMR6Q9Y217 621 aa20.65■□□□□ 0.9
ATPAF1-214ENST00000576409 NR1I2O75469 434 aa20.64■□□□□ 0.9
ATPAF1-214ENST00000576409 CRACR2AQ9BSW2 395 aa20.64■□□□□ 0.9
ATPAF1-214ENST00000576409 MATR3P43243 847 aaKnown RBP eCLIP20.64■□□□□ 0.89
ATPAF1-214ENST00000576409 ANKLE2Q86XL3 938 aa20.64■□□□□ 0.89
ATPAF1-214ENST00000576409 NCOA7Q8NI08 942 aa20.64■□□□□ 0.89
ATPAF1-214ENST00000576409 ASXL2Q76L83 1435 aa20.64■□□□□ 0.89
ATPAF1-214ENST00000576409 TPCN1Q9ULQ1 816 aa20.64■□□□□ 0.89
ATPAF1-214ENST00000576409 PRC1O43663 620 aa20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 ALDH1L1O75891 902 aa20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 AKAP2Q9Y2D5 859 aa20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 RPS6KB1P23443 525 aa20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 DHX32Q7L7V1 743 aaKnown RBP20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 SEC62Q99442 399 aaKnown RBP20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 PUF60Q9UHX1 559 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms