RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
ERCC4-208ENST00000576348 PRR5LQ6MZQ0 368 aa20.45■□□□□ 0.86
ERCC4-208ENST00000576348 TTLL11Q8NHH1 800 aa20.45■□□□□ 0.86
ERCC4-208ENST00000576348 DCTPP1Q9H773 170 aa20.45■□□□□ 0.86
ERCC4-208ENST00000576348 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
ERCC4-208ENST00000576348 ANKRD18BA2A2Z9 1011 aa20.44■□□□□ 0.86
ERCC4-208ENST00000576348 CSF1RP07333 972 aa20.44■□□□□ 0.86
ERCC4-208ENST00000576348 EXOC6BQ9Y2D4 811 aa20.44■□□□□ 0.86
ERCC4-208ENST00000576348 TUBGCP6Q96RT7 1819 aa20.43■□□□□ 0.86
ERCC4-208ENST00000576348 SMC5Q8IY18 1101 aa20.43■□□□□ 0.86
ERCC4-208ENST00000576348 PDGFDQ9GZP0 370 aaPredicted RBP20.43■□□□□ 0.86
ERCC4-208ENST00000576348 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
ERCC4-208ENST00000576348 GREM2Q9H772 168 aa20.43■□□□□ 0.86
ERCC4-208ENST00000576348 PSDA5PKW4 1024 aaPredicted RBP20.42■□□□□ 0.86
ERCC4-208ENST00000576348 RAB11FIP3O75154 756 aa20.42■□□□□ 0.86
ERCC4-208ENST00000576348 ITGA6P23229 1130 aa20.42■□□□□ 0.86
ERCC4-208ENST00000576348 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
ERCC4-208ENST00000576348 ERC1Q8IUD2 1116 aa20.42■□□□□ 0.86
ERCC4-208ENST00000576348 SIL1Q9H173 461 aa20.42■□□□□ 0.86
ERCC4-208ENST00000576348 PA2G4Q9UQ80 394 aaKnown RBP20.42■□□□□ 0.86
ERCC4-208ENST00000576348 COL24A1Q17RW2 1714 aa20.41■□□□□ 0.86
ERCC4-208ENST00000576348 ZBTB7AO95365 584 aa20.41■□□□□ 0.86
ERCC4-208ENST00000576348 POLD1P28340 1107 aa20.41■□□□□ 0.86
ERCC4-208ENST00000576348 RPGRQ92834 1020 aaKnown RBP20.41■□□□□ 0.86
ERCC4-208ENST00000576348 COPRSQ9NQ92 184 aa20.41■□□□□ 0.86
ERCC4-208ENST00000576348 QSER1Q2KHR3 1735 aa20.41■□□□□ 0.86
ERCC4-208ENST00000576348 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
ERCC4-208ENST00000576348 KLHDC4Q8TBB5 520 aa20.4■□□□□ 0.86
ERCC4-208ENST00000576348 CDC5LQ99459 802 aaKnown RBP20.4■□□□□ 0.86
ERCC4-208ENST00000576348 RFX5P48382 616 aaPredicted RBP20.39■□□□□ 0.85
ERCC4-208ENST00000576348 DDX46Q7L014 1031 aaKnown RBP20.39■□□□□ 0.85
ERCC4-208ENST00000576348 LRRCC1Q9C099 1032 aa20.39■□□□□ 0.85
ERCC4-208ENST00000576348 MTFR1LQ9H019 292 aa20.39■□□□□ 0.85
ERCC4-208ENST00000576348 PDZRN3Q9UPQ7 1066 aa20.39■□□□□ 0.85
ERCC4-208ENST00000576348 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
ERCC4-208ENST00000576348 RIC1Q4ADV7 1423 aa20.38■□□□□ 0.85
ERCC4-208ENST00000576348 RTL9Q8NET4 1388 aa20.38■□□□□ 0.85
ERCC4-208ENST00000576348 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
ERCC4-208ENST00000576348 PTPN12Q05209 780 aaKnown RBP20.38■□□□□ 0.85
ERCC4-208ENST00000576348 C3orf67Q6ZVT6 689 aa20.38■□□□□ 0.85
ERCC4-208ENST00000576348 KIF1BPQ96EK5 621 aa20.38■□□□□ 0.85
ERCC4-208ENST00000576348 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
ERCC4-208ENST00000576348 MPHOSPH8Q99549 860 aa20.38■□□□□ 0.85
ERCC4-208ENST00000576348 BRIP1Q9BX63 1249 aa20.38■□□□□ 0.85
ERCC4-208ENST00000576348 CNNM1Q9NRU3 951 aa20.38■□□□□ 0.85
ERCC4-208ENST00000576348 PDE6BP35913 854 aa20.37■□□□□ 0.85
ERCC4-208ENST00000576348 NUCB1Q02818 461 aa20.37■□□□□ 0.85
ERCC4-208ENST00000576348 CHD1LQ86WJ1 897 aa20.37■□□□□ 0.85
ERCC4-208ENST00000576348 ATF5Q9Y2D1 282 aaPredicted RBP20.37■□□□□ 0.85
ERCC4-208ENST00000576348 EYA2O00167 538 aa20.36■□□□□ 0.85
ERCC4-208ENST00000576348 LDHAL6AQ6ZMR3 332 aa20.36■□□□□ 0.85
ERCC4-208ENST00000576348 ANKRD18AQ8IVF6 992 aa20.36■□□□□ 0.85
ERCC4-208ENST00000576348 LNPKQ9C0E8 428 aa20.36■□□□□ 0.85
ERCC4-208ENST00000576348 CIAO1O76071 339 aa20.35■□□□□ 0.85
ERCC4-208ENST00000576348 IL15P40933 162 aaPredicted RBP20.35■□□□□ 0.85
ERCC4-208ENST00000576348 RHPN1Q8TCX5 695 aa20.35■□□□□ 0.85
ERCC4-208ENST00000576348 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
ERCC4-208ENST00000576348 SEC31BQ9NQW1 1179 aa20.35■□□□□ 0.85
ERCC4-208ENST00000576348 FBXO3Q9UK99 471 aa20.35■□□□□ 0.85
ERCC4-208ENST00000576348 SMARCA5O60264 1052 aaPredicted RBP20.34■□□□□ 0.85
ERCC4-208ENST00000576348 IL1RAPL2Q9NP60 686 aa20.33■□□□□ 0.85
ERCC4-208ENST00000576348 RGS3P49796 1198 aa20.32■□□□□ 0.84
ERCC4-208ENST00000576348 LRRC24Q50LG9 513 aa20.32■□□□□ 0.84
ERCC4-208ENST00000576348 METTL24Q5JXM2 366 aa20.32■□□□□ 0.84
ERCC4-208ENST00000576348 PELP1Q8IZL8 1130 aaKnown RBP20.32■□□□□ 0.84
ERCC4-208ENST00000576348 CLASRPQ8N2M8 674 aaKnown RBP20.32■□□□□ 0.84
ERCC4-208ENST00000576348 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
ERCC4-208ENST00000576348 CEP126Q9P2H0 1117 aa20.32■□□□□ 0.84
ERCC4-208ENST00000576348 LAMB2P55268 1798 aa20.31■□□□□ 0.84
ERCC4-208ENST00000576348 H0YIN7 160 aa20.31■□□□□ 0.84
ERCC4-208ENST00000576348 NPR1P16066 1061 aa20.31■□□□□ 0.84
ERCC4-208ENST00000576348 RPS8P62241 208 aaKnown RBP20.31■□□□□ 0.84
ERCC4-208ENST00000576348 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
ERCC4-208ENST00000576348 C2CD5Q86YS7 1000 aa20.31■□□□□ 0.84
ERCC4-208ENST00000576348 DDX60Q8IY21 1712 aaKnown RBP20.3■□□□□ 0.84
ERCC4-208ENST00000576348 TFCP2Q12800 502 aa20.3■□□□□ 0.84
ERCC4-208ENST00000576348 GRAPQ13588 217 aa20.3■□□□□ 0.84
ERCC4-208ENST00000576348 ATG9AQ7Z3C6 839 aa20.3■□□□□ 0.84
ERCC4-208ENST00000576348 GRAPLQ8TC17 118 aaPredicted RBP20.3■□□□□ 0.84
ERCC4-208ENST00000576348 MROH5Q6ZUA9 1318 aa20.29■□□□□ 0.84
ERCC4-208ENST00000576348 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
ERCC4-208ENST00000576348 IFIT2P09913 472 aaKnown RBP20.29■□□□□ 0.84
ERCC4-208ENST00000576348 SASH1O94885 1247 aa20.28■□□□□ 0.84
ERCC4-208ENST00000576348 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
ERCC4-208ENST00000576348 AACSQ86V21 672 aa20.28■□□□□ 0.84
ERCC4-208ENST00000576348 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
ERCC4-208ENST00000576348 CELF1Q92879 486 aaKnown RBP20.28■□□□□ 0.84
ERCC4-208ENST00000576348 ZNF622Q969S3 477 aaKnown RBP eCLIP20.28■□□□□ 0.84
ERCC4-208ENST00000576348 MASTLQ96GX5 879 aa20.28■□□□□ 0.84
ERCC4-208ENST00000576348 GPATCH3Q96I76 525 aa20.28■□□□□ 0.84
ERCC4-208ENST00000576348 TMX4Q9H1E5 349 aaPredicted RBP20.28■□□□□ 0.84
ERCC4-208ENST00000576348 BSDC1Q9NW68 430 aaPredicted RBP20.28■□□□□ 0.84
ERCC4-208ENST00000576348 AKAP2Q9Y2D5 859 aa20.28■□□□□ 0.84
ERCC4-208ENST00000576348 CRAMP1Q96RY5 1269 aa20.27■□□□□ 0.84
ERCC4-208ENST00000576348 PPP1R1BQ9UD71 204 aaPredicted RBP20.27■□□□□ 0.84
ERCC4-208ENST00000576348 RIPOR2Q9Y4F9 1068 aa20.27■□□□□ 0.84
ERCC4-208ENST00000576348 C10orf71Q711Q0 1435 aa20.27■□□□□ 0.83
ERCC4-208ENST00000576348 CASZ1Q86V15 1759 aa20.26■□□□□ 0.83
ERCC4-208ENST00000576348 TNRC6CQ9HCJ0 1690 aaKnown RBP20.26■□□□□ 0.83
ERCC4-208ENST00000576348 SRGNP10124 158 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms