RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 CCER1Q8TC90 406 aaPredicted RBP6.3□□□□□ -1.4
CDC27-218ENST00000575830 BHMTQ93088 406 aa6.3□□□□□ -1.4
CDC27-218ENST00000575830 PRDM6Q9NQX0 595 aa6.3□□□□□ -1.4
CDC27-218ENST00000575830 ENAMQ9NRM1 1142 aa6.3□□□□□ -1.4
CDC27-218ENST00000575830 SOWAHDA6NJG2 315 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 SASH3O75995 380 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 IGHA2P01877 340 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 RPLP1P05386 114 aaKnown RBP6.29□□□□□ -1.4
CDC27-218ENST00000575830 NFKB1P19838 968 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 SOX18P35713 384 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 DGKGP49619 791 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 MAP3K10Q02779 954 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 ZNF211Q13398 564 aaPredicted RBP6.29□□□□□ -1.4
CDC27-218ENST00000575830 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
CDC27-218ENST00000575830 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
CDC27-218ENST00000575830 RAB44Q7Z6P3 723 aaPredicted RBP6.29□□□□□ -1.4
CDC27-218ENST00000575830 NLRP13Q86W25 1043 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 GJD3Q8N144 294 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 CMTR1Q8N1G2 835 aaKnown RBP6.29□□□□□ -1.4
CDC27-218ENST00000575830 GPR152Q8TDT2 470 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 GGNBP2Q9H3C7 697 aa6.29□□□□□ -1.4
CDC27-218ENST00000575830 TLR7Q9NYK1 1049 aaKnown RBP6.29□□□□□ -1.4
CDC27-218ENST00000575830 NRLP54845 237 aa6.28□□□□□ -1.4
CDC27-218ENST00000575830 CHSY3Q70JA7 882 aa6.28□□□□□ -1.4
CDC27-218ENST00000575830 ADH7P40394 386 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 GPLD1P80108 840 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 KCNMA1Q12791 1236 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 KANK3Q6NY19 840 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 DHX32Q7L7V1 743 aaKnown RBP6.27□□□□□ -1.41
CDC27-218ENST00000575830 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 EDEM1Q92611 657 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 TTC9Q92623 222 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 NUDT16Q96DE0 195 aaKnown RBP6.27□□□□□ -1.41
CDC27-218ENST00000575830 ANO2Q9NQ90 1003 aa6.27□□□□□ -1.41
CDC27-218ENST00000575830 FNDC3AQ9Y2H6 1198 aaKnown RBP6.27□□□□□ -1.41
CDC27-218ENST00000575830 UBAP1LF5GYI3 381 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 MMP20O60882 483 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 ABL1P00519 1130 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
CDC27-218ENST00000575830 PCSK7Q16549 785 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 CITED4Q96RK1 184 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 CCDC87Q9NVE4 849 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 DNAJB12Q9NXW2 375 aaKnown RBP6.26□□□□□ -1.41
CDC27-218ENST00000575830 SLC6A14Q9UN76 642 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 POLIQ9UNA4 740 aa6.26□□□□□ -1.41
CDC27-218ENST00000575830 PATL2C9JE40 543 aaKnown RBP6.25□□□□□ -1.41
CDC27-218ENST00000575830 H3BRB1 525 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 KIF4AO95239 1232 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 RARAP10276 462 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 USP5P45974 858 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 MICALL1Q8N3F8 863 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 PNMA5Q96PV4 448 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 TUT1Q9H6E5 874 aaKnown RBP6.25□□□□□ -1.41
CDC27-218ENST00000575830 ELP3Q9H9T3 547 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 FRRS1LQ9P0K9 344 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 NAGPAQ9UK23 515 aa6.25□□□□□ -1.41
CDC27-218ENST00000575830 ALAS2P22557 587 aa6.24□□□□□ -1.41
CDC27-218ENST00000575830 DNM1Q05193 864 aaKnown RBP6.24□□□□□ -1.41
CDC27-218ENST00000575830 GRIK5Q16478 980 aa6.24□□□□□ -1.41
CDC27-218ENST00000575830 GLYCTKQ8IVS8 523 aa6.24□□□□□ -1.41
CDC27-218ENST00000575830 BEND7Q8N7W2 519 aaPredicted RBP6.24□□□□□ -1.41
CDC27-218ENST00000575830 NEDD1Q8NHV4 660 aa6.24□□□□□ -1.41
CDC27-218ENST00000575830 SCARF2Q96GP6 870 aaPredicted RBP6.24□□□□□ -1.41
CDC27-218ENST00000575830 TMEM63CQ9P1W3 806 aa6.24□□□□□ -1.41
CDC27-218ENST00000575830 CNTNAP5Q8WYK1 1306 aa6.24□□□□□ -1.41
CDC27-218ENST00000575830 ALBP02768 609 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 PDIA4P13667 645 aaKnown RBP6.23□□□□□ -1.41
CDC27-218ENST00000575830 PLAURQ03405 335 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 EHHADHQ08426 723 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 KRT25Q7Z3Z0 450 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 LPIN3Q9BQK8 851 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 RBCK1Q9BYM8 510 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 CHRDQ9H2X0 955 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 ABI2Q9NYB9 513 aaPredicted RBP6.23□□□□□ -1.41
CDC27-218ENST00000575830 CNTN3Q9P232 1028 aa6.23□□□□□ -1.41
CDC27-218ENST00000575830 NID1P14543 1247 aa6.22□□□□□ -1.41
CDC27-218ENST00000575830 MARSP56192 900 aaKnown RBP6.22□□□□□ -1.41
CDC27-218ENST00000575830 COL13A1Q5TAT6 717 aaPredicted RBP6.22□□□□□ -1.41
CDC27-218ENST00000575830 KCTD17Q8N5Z5 321 aa6.22□□□□□ -1.41
CDC27-218ENST00000575830 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
CDC27-218ENST00000575830 UBE2OQ9C0C9 1292 aaKnown RBP6.22□□□□□ -1.41
CDC27-218ENST00000575830 SALL4Q9UJQ4 1053 aa6.22□□□□□ -1.41
CDC27-218ENST00000575830 MKL2Q9ULH7 1088 aa6.22□□□□□ -1.41
CDC27-218ENST00000575830 IVNS1ABPQ9Y6Y0 642 aa6.22□□□□□ -1.41
CDC27-218ENST00000575830 LOC102724428A0A0B4J2F2 783 aa6.21□□□□□ -1.42
CDC27-218ENST00000575830 TNFRSF21O75509 655 aa6.21□□□□□ -1.42
CDC27-218ENST00000575830 PSAPP07602 524 aa6.21□□□□□ -1.42
CDC27-218ENST00000575830 PCSK2P16519 638 aa6.21□□□□□ -1.42
CDC27-218ENST00000575830 SIK1P57059 783 aa6.21□□□□□ -1.42
CDC27-218ENST00000575830 PERM1Q5SV97 790 aa6.21□□□□□ -1.42
CDC27-218ENST00000575830 CEP120Q8N960 986 aa6.21□□□□□ -1.42
CDC27-218ENST00000575830 ALKBH8Q96BT7 664 aaKnown RBP6.21□□□□□ -1.42
CDC27-218ENST00000575830 A6NHS1 94 aa6.2□□□□□ -1.42
CDC27-218ENST00000575830 M0R082 166 aa6.2□□□□□ -1.42
CDC27-218ENST00000575830 GNB5O14775 395 aa6.2□□□□□ -1.42
CDC27-218ENST00000575830 AFF1P51825 1210 aaKnown RBP6.2□□□□□ -1.42
CDC27-218ENST00000575830 ZNF438Q7Z4V0 828 aa6.2□□□□□ -1.42
CDC27-218ENST00000575830 ALYREFQ86V81 257 aaKnown RBP6.2□□□□□ -1.42
CDC27-218ENST00000575830 C1orf127Q8N9H9 656 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms