RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CNKSR1Q969H4 720 aa17.57■□□□□ 0.4
RPAIN-217ENST00000575711 SUCLG2Q96I99 432 aa17.57■□□□□ 0.4
RPAIN-217ENST00000575711 COL11A2P13942 1736 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-217ENST00000575711 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
RPAIN-217ENST00000575711 HOXA10P31260 410 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-217ENST00000575711 MVPQ14764 893 aaKnown RBP17.56■□□□□ 0.4
RPAIN-217ENST00000575711 DALRD3Q5D0E6 543 aaKnown RBP17.56■□□□□ 0.4
RPAIN-217ENST00000575711 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
RPAIN-217ENST00000575711 TTLL6Q8N841 843 aa17.56■□□□□ 0.4
RPAIN-217ENST00000575711 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
RPAIN-217ENST00000575711 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
RPAIN-217ENST00000575711 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
RPAIN-217ENST00000575711 FOXO4P98177 505 aa17.55■□□□□ 0.4
RPAIN-217ENST00000575711 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
RPAIN-217ENST00000575711 CCDC85AQ96PX6 553 aaPredicted RBP17.55■□□□□ 0.4
RPAIN-217ENST00000575711 CRAMP1Q96RY5 1269 aa17.55■□□□□ 0.4
RPAIN-217ENST00000575711 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
RPAIN-217ENST00000575711 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
RPAIN-217ENST00000575711 DLEC1Q9Y238 1755 aa17.54■□□□□ 0.4
RPAIN-217ENST00000575711 CENPBP07199 599 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-217ENST00000575711 CSF1RP07333 972 aa17.54■□□□□ 0.4
RPAIN-217ENST00000575711 EPHA10Q5JZY3 1008 aa17.54■□□□□ 0.4
RPAIN-217ENST00000575711 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
RPAIN-217ENST00000575711 KAZALD1Q96I82 304 aa17.54■□□□□ 0.4
RPAIN-217ENST00000575711 CHMP4BQ9H444 224 aaKnown RBP17.54■□□□□ 0.4
RPAIN-217ENST00000575711 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
RPAIN-217ENST00000575711 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-217ENST00000575711 GRAPQ13588 217 aa17.53■□□□□ 0.4
RPAIN-217ENST00000575711 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
RPAIN-217ENST00000575711 LMBR1LQ6UX01 489 aa17.53■□□□□ 0.4
RPAIN-217ENST00000575711 GRAPLQ8TC17 118 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-217ENST00000575711 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
RPAIN-217ENST00000575711 GREM2Q9H772 168 aa17.53■□□□□ 0.4
RPAIN-217ENST00000575711 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
RPAIN-217ENST00000575711 GNAI2P04899 355 aa17.52■□□□□ 0.4
RPAIN-217ENST00000575711 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
RPAIN-217ENST00000575711 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
RPAIN-217ENST00000575711 ITGA6P23229 1130 aa17.51■□□□□ 0.39
RPAIN-217ENST00000575711 IFIT5Q13325 482 aaKnown RBP17.51■□□□□ 0.39
RPAIN-217ENST00000575711 GPR162Q16538 588 aa17.51■□□□□ 0.39
RPAIN-217ENST00000575711 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-217ENST00000575711 CDC5LQ99459 802 aaKnown RBP17.51■□□□□ 0.39
RPAIN-217ENST00000575711 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
RPAIN-217ENST00000575711 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
RPAIN-217ENST00000575711 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
RPAIN-217ENST00000575711 PPEF1O14829 653 aaPredicted RBP17.5■□□□□ 0.39
RPAIN-217ENST00000575711 BBOX1O75936 387 aa17.5■□□□□ 0.39
RPAIN-217ENST00000575711 CCDC57Q2TAC2 916 aa17.5■□□□□ 0.39
RPAIN-217ENST00000575711 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
RPAIN-217ENST00000575711 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
RPAIN-217ENST00000575711 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
RPAIN-217ENST00000575711 MYH3P11055 1940 aa17.49■□□□□ 0.39
RPAIN-217ENST00000575711 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
RPAIN-217ENST00000575711 TMC4Q7Z404 712 aa17.49■□□□□ 0.39
RPAIN-217ENST00000575711 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
RPAIN-217ENST00000575711 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
RPAIN-217ENST00000575711 BRCA1P38398 1863 aaKnown RBP17.49■□□□□ 0.39
RPAIN-217ENST00000575711 C21orf2O43822 256 aa17.48■□□□□ 0.39
RPAIN-217ENST00000575711 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
RPAIN-217ENST00000575711 IGHMBP2P38935 993 aaKnown RBP17.48■□□□□ 0.39
RPAIN-217ENST00000575711 TAF7LQ5H9L4 462 aa17.48■□□□□ 0.39
RPAIN-217ENST00000575711 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
RPAIN-217ENST00000575711 C1orf115Q9H7X2 142 aa17.47■□□□□ 0.39
RPAIN-217ENST00000575711 ZBTB40Q9NUA8 1239 aa17.47■□□□□ 0.39
RPAIN-217ENST00000575711 GRIN3BO60391 1043 aa17.46■□□□□ 0.39
RPAIN-217ENST00000575711 CCDC93Q567U6 631 aa17.46■□□□□ 0.39
RPAIN-217ENST00000575711 CC2D2BQ6DHV5 1058 aa17.46■□□□□ 0.39
RPAIN-217ENST00000575711 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
RPAIN-217ENST00000575711 CRBNQ96SW2 442 aa17.46■□□□□ 0.39
RPAIN-217ENST00000575711 MPHOSPH8Q99549 860 aa17.46■□□□□ 0.39
RPAIN-217ENST00000575711 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
RPAIN-217ENST00000575711 SLX4Q8IY92 1834 aa17.45■□□□□ 0.38
RPAIN-217ENST00000575711 MTX1Q13505 466 aa17.45■□□□□ 0.38
RPAIN-217ENST00000575711 SP8Q8IXZ3 490 aa17.45■□□□□ 0.38
RPAIN-217ENST00000575711 BSDC1Q9NW68 430 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-217ENST00000575711 CACNA1SQ13698 1873 aa17.44■□□□□ 0.38
RPAIN-217ENST00000575711 SRGAP3O43295 1099 aa17.44■□□□□ 0.38
RPAIN-217ENST00000575711 GRIPAP1Q4V328 841 aa17.44■□□□□ 0.38
RPAIN-217ENST00000575711 COL4A1P02462 1669 aa17.43■□□□□ 0.38
RPAIN-217ENST00000575711 ARFGEF1Q9Y6D6 1849 aa17.43■□□□□ 0.38
RPAIN-217ENST00000575711 OLFM4Q6UX06 510 aa17.43■□□□□ 0.38
RPAIN-217ENST00000575711 ARHGAP27Q6ZUM4 889 aa17.43■□□□□ 0.38
RPAIN-217ENST00000575711 RTKN2Q8IZC4 609 aa17.43■□□□□ 0.38
RPAIN-217ENST00000575711 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-217ENST00000575711 CNNM1Q9NRU3 951 aa17.43■□□□□ 0.38
RPAIN-217ENST00000575711 RFX5P48382 616 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-217ENST00000575711 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
RPAIN-217ENST00000575711 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
RPAIN-217ENST00000575711 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
RPAIN-217ENST00000575711 TAF1P21675 1872 aa17.41■□□□□ 0.38
RPAIN-217ENST00000575711 PTPN12Q05209 780 aaKnown RBP17.41■□□□□ 0.38
RPAIN-217ENST00000575711 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
RPAIN-217ENST00000575711 KLHDC4Q8TBB5 520 aa17.41■□□□□ 0.38
RPAIN-217ENST00000575711 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
RPAIN-217ENST00000575711 AAMPQ13685 434 aa17.4■□□□□ 0.38
RPAIN-217ENST00000575711 DPP8Q6V1X1 898 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-217ENST00000575711 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-217ENST00000575711 MPNDQ8N594 471 aa17.4■□□□□ 0.38
RPAIN-217ENST00000575711 TAOK3Q9H2K8 898 aa17.4■□□□□ 0.38
RPAIN-217ENST00000575711 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms