RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 LMNB1P20700 586 aa18.93■□□□□ 0.62
TRAPPC1-207ENST00000575639 CTSWP56202 376 aa18.93■□□□□ 0.62
TRAPPC1-207ENST00000575639 ATP6V0A2Q9Y487 856 aa18.93■□□□□ 0.62
TRAPPC1-207ENST00000575639 ARFGEF2Q9Y6D5 1785 aa18.93■□□□□ 0.62
TRAPPC1-207ENST00000575639 NFKBIEO00221 500 aa18.92■□□□□ 0.62
TRAPPC1-207ENST00000575639 GRM8O00222 908 aa18.92■□□□□ 0.62
TRAPPC1-207ENST00000575639 RASSF7Q02833 373 aa18.92■□□□□ 0.62
TRAPPC1-207ENST00000575639 PLA2G12BQ9BX93 195 aa18.92■□□□□ 0.62
TRAPPC1-207ENST00000575639 RNF181Q9P0P0 153 aa18.92■□□□□ 0.62
TRAPPC1-207ENST00000575639 LTBP3Q9NS15 1303 aa18.92■□□□□ 0.62
TRAPPC1-207ENST00000575639 ANKRD36CQ5JPF3 1778 aa18.91■□□□□ 0.62
TRAPPC1-207ENST00000575639 CCT4P50991 539 aaKnown RBP18.91■□□□□ 0.62
TRAPPC1-207ENST00000575639 CASP7P55210 303 aa18.91■□□□□ 0.62
TRAPPC1-207ENST00000575639 RPS8P62241 208 aaKnown RBP18.91■□□□□ 0.62
TRAPPC1-207ENST00000575639 SP8Q8IXZ3 490 aa18.91■□□□□ 0.62
TRAPPC1-207ENST00000575639 BCAR3O75815 825 aa18.9■□□□□ 0.62
TRAPPC1-207ENST00000575639 FKBP4Q02790 459 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRAPPC1-207ENST00000575639 OLFM4Q6UX06 510 aa18.9■□□□□ 0.62
TRAPPC1-207ENST00000575639 TTLL11Q8NHH1 800 aa18.9■□□□□ 0.62
TRAPPC1-207ENST00000575639 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC1-207ENST00000575639 CCDC85AQ96PX6 553 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC1-207ENST00000575639 CDC5LQ99459 802 aaKnown RBP18.9■□□□□ 0.62
TRAPPC1-207ENST00000575639 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
TRAPPC1-207ENST00000575639 DNAJC5GQ8N7S2 189 aa18.89■□□□□ 0.61
TRAPPC1-207ENST00000575639 CELF1Q92879 486 aaKnown RBP18.89■□□□□ 0.61
TRAPPC1-207ENST00000575639 PSMD1Q99460 953 aa18.89■□□□□ 0.61
TRAPPC1-207ENST00000575639 CACNA1FO60840 1977 aa18.89■□□□□ 0.61
TRAPPC1-207ENST00000575639 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC1-207ENST00000575639 ANKRD18AQ8IVF6 992 aa18.88■□□□□ 0.61
TRAPPC1-207ENST00000575639 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
TRAPPC1-207ENST00000575639 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
TRAPPC1-207ENST00000575639 BRCA1P38398 1863 aaKnown RBP18.88■□□□□ 0.61
TRAPPC1-207ENST00000575639 CSF1RP07333 972 aa18.87■□□□□ 0.61
TRAPPC1-207ENST00000575639 COL13A1Q5TAT6 717 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC1-207ENST00000575639 ZKSCAN2Q63HK3 967 aa18.87■□□□□ 0.61
TRAPPC1-207ENST00000575639 DPP8Q6V1X1 898 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC1-207ENST00000575639 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
TRAPPC1-207ENST00000575639 MPNDQ8N594 471 aa18.87■□□□□ 0.61
TRAPPC1-207ENST00000575639 SUPT20HQ8NEM7 779 aa18.87■□□□□ 0.61
TRAPPC1-207ENST00000575639 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
TRAPPC1-207ENST00000575639 CAPN15O75808 1086 aa18.86■□□□□ 0.61
TRAPPC1-207ENST00000575639 ZNF526Q8TF50 670 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC1-207ENST00000575639 GREM2Q9H772 168 aa18.86■□□□□ 0.61
TRAPPC1-207ENST00000575639 ZNF277Q9NRM2 450 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC1-207ENST00000575639 HDAC5Q9UQL6 1122 aa18.86■□□□□ 0.61
TRAPPC1-207ENST00000575639 RTL9Q8NET4 1388 aa18.85■□□□□ 0.61
TRAPPC1-207ENST00000575639 UTYO14607 1347 aa18.85■□□□□ 0.61
TRAPPC1-207ENST00000575639 NBPF7P0C2Y1 421 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC1-207ENST00000575639 IGHMBP2P38935 993 aaKnown RBP18.85■□□□□ 0.61
TRAPPC1-207ENST00000575639 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
TRAPPC1-207ENST00000575639 CHMP3Q9Y3E7 222 aa18.85■□□□□ 0.61
TRAPPC1-207ENST00000575639 ARFGEF1Q9Y6D6 1849 aa18.85■□□□□ 0.61
TRAPPC1-207ENST00000575639 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 TRIM27P14373 513 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 ITGA6P23229 1130 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 APLP1P51693 650 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 FOXO4P98177 505 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 IFIT5Q13325 482 aaKnown RBP18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 USP44Q9H0E7 712 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 VPS33BQ9H267 617 aa18.84■□□□□ 0.61
TRAPPC1-207ENST00000575639 KIF3CO14782 793 aa18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 PRELPP51888 382 aa18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 CCDC57Q2TAC2 916 aa18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 INTS3Q68E01 1043 aaKnown RBP18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 BSDC1Q9NW68 430 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 NSFL1CQ9UNZ2 370 aaKnown RBP18.83■□□□□ 0.6
TRAPPC1-207ENST00000575639 DPY19L2Q6NUT2 758 aa18.82■□□□□ 0.6
TRAPPC1-207ENST00000575639 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
TRAPPC1-207ENST00000575639 SUCLG2Q96I99 432 aa18.82■□□□□ 0.6
TRAPPC1-207ENST00000575639 RTFDC1Q9BY42 306 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC1-207ENST00000575639 ANKIB1Q9P2G1 1089 aa18.82■□□□□ 0.6
TRAPPC1-207ENST00000575639 UBTFL1P0CB47 393 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC1-207ENST00000575639 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
TRAPPC1-207ENST00000575639 EPHA10Q5JZY3 1008 aa18.81■□□□□ 0.6
TRAPPC1-207ENST00000575639 LARGE2Q8N3Y3 721 aa18.81■□□□□ 0.6
TRAPPC1-207ENST00000575639 CLUAP1Q96AJ1 413 aa18.81■□□□□ 0.6
TRAPPC1-207ENST00000575639 RCAN3Q9UKA8 241 aa18.81■□□□□ 0.6
TRAPPC1-207ENST00000575639 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
TRAPPC1-207ENST00000575639 PPIP5K2O43314 1243 aa18.8■□□□□ 0.6
TRAPPC1-207ENST00000575639 GPSM2P81274 684 aa18.8■□□□□ 0.6
TRAPPC1-207ENST00000575639 SLC51AQ86UW1 340 aa18.8■□□□□ 0.6
TRAPPC1-207ENST00000575639 BICC1Q9H694 974 aaKnown RBP18.8■□□□□ 0.6
TRAPPC1-207ENST00000575639 C6orf229H3BNL8 230 aa18.79■□□□□ 0.6
TRAPPC1-207ENST00000575639 GNAI3P08754 354 aa18.79■□□□□ 0.6
TRAPPC1-207ENST00000575639 MS4A1P11836 297 aa18.79■□□□□ 0.6
TRAPPC1-207ENST00000575639 EYA3Q99504 573 aa18.79■□□□□ 0.6
TRAPPC1-207ENST00000575639 PODXL2Q9NZ53 605 aa18.79■□□□□ 0.6
TRAPPC1-207ENST00000575639 SNED1Q8TER0 1413 aa18.79■□□□□ 0.6
TRAPPC1-207ENST00000575639 DDX60Q8IY21 1712 aaKnown RBP18.79■□□□□ 0.6
TRAPPC1-207ENST00000575639 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
TRAPPC1-207ENST00000575639 RABL6Q3YEC7 729 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC1-207ENST00000575639 NIM1KQ8IY84 436 aa18.78■□□□□ 0.6
TRAPPC1-207ENST00000575639 DZIP1LQ8IYY4 767 aaKnown RBP18.78■□□□□ 0.6
TRAPPC1-207ENST00000575639 KAZALD1Q96I82 304 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms