RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
CDC27-217ENST00000575483 TCERG1O14776 1098 aaKnown RBP18.22■□□□□ 0.51
CDC27-217ENST00000575483 EIF6P56537 245 aaKnown RBP18.22■□□□□ 0.51
CDC27-217ENST00000575483 TCIRG1Q13488 830 aa18.22■□□□□ 0.51
CDC27-217ENST00000575483 TNS4Q8IZW8 715 aa18.22■□□□□ 0.51
CDC27-217ENST00000575483 CNTROBQ8N137 903 aa18.22■□□□□ 0.51
CDC27-217ENST00000575483 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
CDC27-217ENST00000575483 HCLS1P14317 486 aaPredicted RBP18.21■□□□□ 0.51
CDC27-217ENST00000575483 EPS15P42566 896 aa18.21■□□□□ 0.51
CDC27-217ENST00000575483 VEGFBP49765 207 aa18.21■□□□□ 0.51
CDC27-217ENST00000575483 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
CDC27-217ENST00000575483 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
CDC27-217ENST00000575483 GJA3Q9Y6H8 435 aa18.21■□□□□ 0.51
CDC27-217ENST00000575483 RASSF10A6NK89 507 aa18.2■□□□□ 0.5
CDC27-217ENST00000575483 HOXB7P09629 217 aa18.2■□□□□ 0.5
CDC27-217ENST00000575483 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
CDC27-217ENST00000575483 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
CDC27-217ENST00000575483 AOC3Q16853 763 aa18.2■□□□□ 0.5
CDC27-217ENST00000575483 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
CDC27-217ENST00000575483 ADAMTS8Q9UP79 889 aa18.2■□□□□ 0.5
CDC27-217ENST00000575483 FOXN1O15353 648 aa18.19■□□□□ 0.5
CDC27-217ENST00000575483 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
CDC27-217ENST00000575483 NIM1KQ8IY84 436 aa18.19■□□□□ 0.5
CDC27-217ENST00000575483 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
CDC27-217ENST00000575483 BBOX1O75936 387 aa18.18■□□□□ 0.5
CDC27-217ENST00000575483 FMR1Q06787 632 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDC27-217ENST00000575483 CXCL9Q07325 125 aa18.18■□□□□ 0.5
CDC27-217ENST00000575483 SP8Q8IXZ3 490 aa18.18■□□□□ 0.5
CDC27-217ENST00000575483 ISCA1Q9BUE6 129 aa18.18■□□□□ 0.5
CDC27-217ENST00000575483 HDGFL1Q5TGJ6 251 aa18.17■□□□□ 0.5
CDC27-217ENST00000575483 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
CDC27-217ENST00000575483 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
CDC27-217ENST00000575483 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
CDC27-217ENST00000575483 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
CDC27-217ENST00000575483 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
CDC27-217ENST00000575483 LMOD1P29536 600 aaPredicted RBP18.16■□□□□ 0.5
CDC27-217ENST00000575483 FXR2P51116 673 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDC27-217ENST00000575483 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
CDC27-217ENST00000575483 GRAPQ13588 217 aa18.16■□□□□ 0.5
CDC27-217ENST00000575483 USP50Q70EL3 339 aaPredicted RBP18.16■□□□□ 0.5
CDC27-217ENST00000575483 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
CDC27-217ENST00000575483 CFAP44Q96MT7 982 aa18.16■□□□□ 0.5
CDC27-217ENST00000575483 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDC27-217ENST00000575483 DPP8Q6V1X1 898 aaPredicted RBP18.15■□□□□ 0.5
CDC27-217ENST00000575483 SUPT20HQ8NEM7 779 aa18.15■□□□□ 0.5
CDC27-217ENST00000575483 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
CDC27-217ENST00000575483 PRKRIP1Q9H875 184 aaPredicted RBP18.15■□□□□ 0.5
CDC27-217ENST00000575483 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
CDC27-217ENST00000575483 WBP1LQ9NX94 342 aa18.15■□□□□ 0.5
CDC27-217ENST00000575483 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
CDC27-217ENST00000575483 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
CDC27-217ENST00000575483 DUSP27Q5VZP5 1158 aa18.14■□□□□ 0.49
CDC27-217ENST00000575483 CST9Q5W186 159 aa18.14■□□□□ 0.49
CDC27-217ENST00000575483 ANKRD13DQ6ZTN6 518 aa18.14■□□□□ 0.49
CDC27-217ENST00000575483 MPNDQ8N594 471 aa18.14■□□□□ 0.49
CDC27-217ENST00000575483 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
CDC27-217ENST00000575483 TRAF5O00463 557 aa18.13■□□□□ 0.49
CDC27-217ENST00000575483 GMPSP49915 693 aaPredicted RBP18.13■□□□□ 0.49
CDC27-217ENST00000575483 TRIM28Q13263 835 aaKnown RBP18.13■□□□□ 0.49
CDC27-217ENST00000575483 SF3B3Q15393 1217 aaKnown RBP18.13■□□□□ 0.49
CDC27-217ENST00000575483 DEFB115Q30KQ5 88 aa18.13■□□□□ 0.49
CDC27-217ENST00000575483 DDX46Q7L014 1031 aaKnown RBP18.13■□□□□ 0.49
CDC27-217ENST00000575483 PRDM10Q9NQV6 1147 aa18.13■□□□□ 0.49
CDC27-217ENST00000575483 ADARB2Q9NS39 739 aaKnown RBP18.13■□□□□ 0.49
CDC27-217ENST00000575483 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
CDC27-217ENST00000575483 SCN9AQ15858 1988 aa18.13■□□□□ 0.49
CDC27-217ENST00000575483 ATP5J2-PTCD1G3V325 749 aa18.12■□□□□ 0.49
CDC27-217ENST00000575483 FAM89AQ96GI7 184 aa18.12■□□□□ 0.49
CDC27-217ENST00000575483 PGAP2Q9UHJ9 254 aa18.12■□□□□ 0.49
CDC27-217ENST00000575483 WDR33Q9C0J8 1336 aaKnown RBP18.12■□□□□ 0.49
CDC27-217ENST00000575483 TMC4Q7Z404 712 aa18.11■□□□□ 0.49
CDC27-217ENST00000575483 PIP4P2Q8N4L2 257 aa18.11■□□□□ 0.49
CDC27-217ENST00000575483 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
CDC27-217ENST00000575483 TMX4Q9H1E5 349 aaPredicted RBP18.11■□□□□ 0.49
CDC27-217ENST00000575483 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
CDC27-217ENST00000575483 CTCFP49711 727 aaPredicted RBP18.1■□□□□ 0.49
CDC27-217ENST00000575483 HIRAP54198 1017 aaPredicted RBP18.1■□□□□ 0.49
CDC27-217ENST00000575483 CIAPIN1Q6FI81 312 aa18.1■□□□□ 0.49
CDC27-217ENST00000575483 SHTN1A0MZ66 631 aa18.09■□□□□ 0.49
CDC27-217ENST00000575483 APAF1O14727 1248 aa18.09■□□□□ 0.49
CDC27-217ENST00000575483 RAD17O75943 681 aa18.09■□□□□ 0.49
CDC27-217ENST00000575483 IFT57Q9NWB7 429 aa18.09■□□□□ 0.49
CDC27-217ENST00000575483 ABT1Q9ULW3 272 aaKnown RBP18.09■□□□□ 0.49
CDC27-217ENST00000575483 PSME4Q14997 1843 aa18.09■□□□□ 0.49
CDC27-217ENST00000575483 POLR2AP24928 1970 aaKnown RBP18.08■□□□□ 0.49
CDC27-217ENST00000575483 HSPA8P11142 646 aaKnown RBP18.08■□□□□ 0.48
CDC27-217ENST00000575483 TRPM4Q8TD43 1214 aa18.08■□□□□ 0.48
CDC27-217ENST00000575483 POLLQ9UGP5 575 aa18.08■□□□□ 0.48
CDC27-217ENST00000575483 TLL2Q9Y6L7 1015 aa18.08■□□□□ 0.48
CDC27-217ENST00000575483 CAPNS2Q96L46 248 aa18.07■□□□□ 0.48
CDC27-217ENST00000575483 PHAXQ9H814 394 aaKnown RBP18.07■□□□□ 0.48
CDC27-217ENST00000575483 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
CDC27-217ENST00000575483 LBX1P52954 281 aa18.06■□□□□ 0.48
CDC27-217ENST00000575483 GPSM2P81274 684 aa18.06■□□□□ 0.48
CDC27-217ENST00000575483 TNIP1Q15025 636 aa18.06■□□□□ 0.48
CDC27-217ENST00000575483 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
CDC27-217ENST00000575483 CYP4F22Q6NT55 531 aa18.06■□□□□ 0.48
CDC27-217ENST00000575483 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
CDC27-217ENST00000575483 ZC3H15Q8WU90 426 aaKnown RBP18.06■□□□□ 0.48
CDC27-217ENST00000575483 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms