RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	PNISR	Q8TF01	805 aa	Known RBP	12.79	□□□□□ -0.36
NXN-208	ENST00000575171	RUNDC1	Q96C34	613 aa		12.79	□□□□□ -0.36
NXN-208	ENST00000575171	FAM117A	Q9C073	453 aa		12.79	□□□□□ -0.36
NXN-208	ENST00000575171	PNPLA7	Q6ZV29	1317 aa		12.79	□□□□□ -0.36
NXN-208	ENST00000575171	NFE2L2	Q16236	605 aa		12.78	□□□□□ -0.36
NXN-208	ENST00000575171	IFFO2	Q5TF58	517 aa		12.78	□□□□□ -0.36
NXN-208	ENST00000575171	RTF1	Q92541	710 aa	Known RBP	12.78	□□□□□ -0.36
NXN-208	ENST00000575171	LGR6	Q9HBX8	967 aa		12.78	□□□□□ -0.36
NXN-208	ENST00000575171	RRP7A	Q9Y3A4	280 aa	Known RBP	12.78	□□□□□ -0.36
NXN-208	ENST00000575171	C5	P01031	1676 aa		12.77	□□□□□ -0.36
NXN-208	ENST00000575171	ERVV-2	B6SEH9	535 aa		12.77	□□□□□ -0.37
NXN-208	ENST00000575171	CCER2	I3L3R5	266 aa		12.77	□□□□□ -0.37
NXN-208	ENST00000575171	HOXA2	O43364	376 aa		12.77	□□□□□ -0.37
NXN-208	ENST00000575171	ITGBL1	O95965	494 aa	Predicted RBP	12.77	□□□□□ -0.37
NXN-208	ENST00000575171	TJAP1	Q5JTD0	557 aa		12.77	□□□□□ -0.37
NXN-208	ENST00000575171	PIGB	Q92521	554 aa		12.77	□□□□□ -0.37
NXN-208	ENST00000575171	TBC1D2	Q9BYX2	928 aa		12.77	□□□□□ -0.37
NXN-208	ENST00000575171	IL21	Q9HBE4	155 aa		12.77	□□□□□ -0.37
NXN-208	ENST00000575171	NR1I2	O75469	434 aa		12.76	□□□□□ -0.37
NXN-208	ENST00000575171	DCTN1	Q14203	1278 aa		12.76	□□□□□ -0.37
NXN-208	ENST00000575171	MORN1	Q5T089	497 aa		12.76	□□□□□ -0.37
NXN-208	ENST00000575171	MCM10	Q7L590	875 aa		12.76	□□□□□ -0.37
NXN-208	ENST00000575171	SLC16A10	Q8TF71	515 aa		12.76	□□□□□ -0.37
NXN-208	ENST00000575171	TOGARAM1	Q9Y4F4	1720 aa		12.76	□□□□□ -0.37
NXN-208	ENST00000575171	GIGYF1	O75420	1035 aa	Predicted RBP	12.75	□□□□□ -0.37
NXN-208	ENST00000575171	TMPO	P42166	694 aa	Known RBP	12.75	□□□□□ -0.37
NXN-208	ENST00000575171	RIPK4	P57078	832 aa		12.75	□□□□□ -0.37
NXN-208	ENST00000575171	KCNC4	Q03721	635 aa		12.75	□□□□□ -0.37
NXN-208	ENST00000575171	TEF	Q10587	303 aa		12.75	□□□□□ -0.37
NXN-208	ENST00000575171	NFATC2IP	Q8NCF5	419 aa		12.75	□□□□□ -0.37
NXN-208	ENST00000575171	IL17RE	Q8NFR9	667 aa		12.75	□□□□□ -0.37
NXN-208	ENST00000575171	NLGN2	Q8NFZ4	835 aa		12.75	□□□□□ -0.37
NXN-208	ENST00000575171	APAF1	O14727	1248 aa		12.74	□□□□□ -0.37
NXN-208	ENST00000575171	GPR162	Q16538	588 aa		12.74	□□□□□ -0.37
NXN-208	ENST00000575171	SLC27A3	Q5K4L6	730 aa		12.74	□□□□□ -0.37
NXN-208	ENST00000575171	SLC52A2	Q9HAB3	445 aa		12.74	□□□□□ -0.37
NXN-208	ENST00000575171	ADCY9	O60503	1353 aa		12.73	□□□□□ -0.37
NXN-208	ENST00000575171	PALLD	Q8WX93	1383 aa		12.73	□□□□□ -0.37
NXN-208	ENST00000575171	HTATSF1	O43719	755 aa	Known RBP	12.73	□□□□□ -0.37
NXN-208	ENST00000575171	YBX3	P16989	372 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
NXN-208	ENST00000575171	LMOD3	Q0VAK6	560 aa		12.73	□□□□□ -0.37
NXN-208	ENST00000575171	SCUBE3	Q8IX30	993 aa		12.73	□□□□□ -0.37
NXN-208	ENST00000575171	SMARCC1	Q92922	1105 aa	Predicted RBP	12.73	□□□□□ -0.37
NXN-208	ENST00000575171	THUMPD2	Q9BTF0	503 aa	Known RBP	12.73	□□□□□ -0.37
NXN-208	ENST00000575171	UBR3	Q6ZT12	1888 aa		12.72	□□□□□ -0.37
NXN-208	ENST00000575171	ZPR1	O75312	459 aa		12.72	□□□□□ -0.37
NXN-208	ENST00000575171	ATG3	Q9NT62	314 aa		12.72	□□□□□ -0.37
NXN-208	ENST00000575171	PLA2G2E	Q9NZK7	142 aa		12.72	□□□□□ -0.37
NXN-208	ENST00000575171	ASAP1	Q9ULH1	1129 aa		12.72	□□□□□ -0.37
NXN-208	ENST00000575171	SLC27A5	Q9Y2P5	690 aa		12.72	□□□□□ -0.37
NXN-208	ENST00000575171	ITGB4	P16144	1822 aa		12.72	□□□□□ -0.37
NXN-208	ENST00000575171	ATP10D	Q9P241	1426 aa		12.71	□□□□□ -0.37
NXN-208	ENST00000575171	MOXD2P	A6NHM9	499 aa		12.71	□□□□□ -0.37
NXN-208	ENST00000575171	KCNQ4	P56696	695 aa		12.71	□□□□□ -0.37
NXN-208	ENST00000575171	SLC39A6	Q13433	755 aa		12.71	□□□□□ -0.37
NXN-208	ENST00000575171	IL27	Q8NEV9	243 aa		12.71	□□□□□ -0.37
NXN-208	ENST00000575171	ZNF516	Q92618	1163 aa		12.71	□□□□□ -0.37
NXN-208	ENST00000575171	HLA-C	Q95604	372 aa		12.71	□□□□□ -0.37
NXN-208	ENST00000575171	CCNL1	Q9UK58	526 aa	Predicted RBP	12.71	□□□□□ -0.37
NXN-208	ENST00000575171	MRC1	P22897	1456 aa		12.71	□□□□□ -0.38
NXN-208	ENST00000575171	CEMIP	Q8WUJ3	1361 aa		12.7	□□□□□ -0.38
NXN-208	ENST00000575171	BTBD11	A6QL63	1104 aa		12.7	□□□□□ -0.38
NXN-208	ENST00000575171	MYSM1	Q5VVJ2	828 aa		12.7	□□□□□ -0.38
NXN-208	ENST00000575171	TTC5	Q8N0Z6	440 aa		12.7	□□□□□ -0.38
NXN-208	ENST00000575171	SALL2	Q9Y467	1007 aa	Predicted RBP	12.7	□□□□□ -0.38
NXN-208	ENST00000575171	KIAA1551	Q9HCM1	1747 aa		12.69	□□□□□ -0.38
NXN-208	ENST00000575171	PTCD1	O75127	700 aa	Known RBP	12.69	□□□□□ -0.38
NXN-208	ENST00000575171	FDX1	P10109	184 aa		12.69	□□□□□ -0.38
NXN-208	ENST00000575171	NDUFV2	P19404	249 aa		12.69	□□□□□ -0.38
NXN-208	ENST00000575171	POLD1	P28340	1107 aa		12.69	□□□□□ -0.38
NXN-208	ENST00000575171	GUCA2A	Q02747	115 aa		12.69	□□□□□ -0.38
NXN-208	ENST00000575171	CIC	Q96RK0	1608 aa	Predicted RBP	12.69	□□□□□ -0.38
NXN-208	ENST00000575171	LOC102724428	A0A0B4J2F2	783 aa		12.68	□□□□□ -0.38
NXN-208	ENST00000575171	GJA5	P36382	358 aa		12.68	□□□□□ -0.38
NXN-208	ENST00000575171	SIK1	P57059	783 aa		12.68	□□□□□ -0.38
NXN-208	ENST00000575171		Q3C1V9	767 aa		12.68	□□□□□ -0.38
NXN-208	ENST00000575171	MIS18A	Q9NYP9	233 aa		12.68	□□□□□ -0.38
NXN-208	ENST00000575171	C4B	P0C0L5	1744 aa		12.68	□□□□□ -0.38
NXN-208	ENST00000575171	KIF13B	Q9NQT8	1826 aa		12.67	□□□□□ -0.38
NXN-208	ENST00000575171	TAF7	Q15545	349 aa	Predicted RBP	12.67	□□□□□ -0.38
NXN-208	ENST00000575171	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.67	□□□□□ -0.38
NXN-208	ENST00000575171	RIC3	Q7Z5B4	369 aa		12.67	□□□□□ -0.38
NXN-208	ENST00000575171	TFCP2L1	Q9NZI6	479 aa		12.67	□□□□□ -0.38
NXN-208	ENST00000575171	LAS1L	Q9Y4W2	734 aa	Known RBP	12.67	□□□□□ -0.38
NXN-208	ENST00000575171	KCNQ3	O43525	872 aa		12.66	□□□□□ -0.38
NXN-208	ENST00000575171	SH3D19	Q5HYK7	790 aa		12.66	□□□□□ -0.38
NXN-208	ENST00000575171	ZNF790	Q6PG37	636 aa		12.66	□□□□□ -0.38
NXN-208	ENST00000575171	COL23A1	Q86Y22	540 aa	Predicted RBP	12.66	□□□□□ -0.38
NXN-208	ENST00000575171	ADAMTS7	Q9UKP4	1686 aa		12.66	□□□□□ -0.38
NXN-208	ENST00000575171	SPTLC1	O15269	473 aa		12.65	□□□□□ -0.38
NXN-208	ENST00000575171	GRIN3B	O60391	1043 aa		12.65	□□□□□ -0.38
NXN-208	ENST00000575171	FMNL1	O95466	1100 aa	Predicted RBP	12.65	□□□□□ -0.38
NXN-208	ENST00000575171	ITPK1	Q13572	414 aa		12.65	□□□□□ -0.38
NXN-208	ENST00000575171	TSPYL4	Q9UJ04	414 aa		12.65	□□□□□ -0.38
NXN-208	ENST00000575171	SCN11A	Q9UI33	1791 aa		12.64	□□□□□ -0.39
NXN-208	ENST00000575171	BRCA1	P38398	1863 aa	Known RBP	12.64	□□□□□ -0.39
NXN-208	ENST00000575171	TLL1	O43897	1013 aa		12.64	□□□□□ -0.39
NXN-208	ENST00000575171	CLK2	P49760	499 aa	Known RBP	12.64	□□□□□ -0.39
NXN-208	ENST00000575171	CALD1	Q05682	793 aa	Known RBP	12.64	□□□□□ -0.39
NXN-208	ENST00000575171	THAP11	Q96EK4	314 aa		12.64	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms