RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 MMP10P09238 476 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 RFX5P48382 616 aaPredicted RBP14.78□□□□□ -0.04
PRPF8-212ENST00000575116 CCDC57Q2TAC2 916 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 CCDC152Q4G0S7 254 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 PRR5LQ6MZQ0 368 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 COPRSQ9NQ92 184 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 NRXN2Q9P2S2 1712 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 IFIT5Q13325 482 aaKnown RBP14.77□□□□□ -0.05
PRPF8-212ENST00000575116 ANKRD18BA2A2Z9 1011 aa14.76□□□□□ -0.05
PRPF8-212ENST00000575116 SURF6O75683 361 aaKnown RBP14.76□□□□□ -0.05
PRPF8-212ENST00000575116 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
PRPF8-212ENST00000575116 CHMP3Q9Y3E7 222 aa14.76□□□□□ -0.05
PRPF8-212ENST00000575116 ABCC12Q96J65 1359 aa14.75□□□□□ -0.05
PRPF8-212ENST00000575116 KLRG2A4D1S0 409 aaPredicted RBP14.75□□□□□ -0.05
PRPF8-212ENST00000575116 ITGA6P23229 1130 aa14.75□□□□□ -0.05
PRPF8-212ENST00000575116 NUCB1Q02818 461 aa14.75□□□□□ -0.05
PRPF8-212ENST00000575116 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.055e-7■■■■■ 28.4
PRPF8-212ENST00000575116 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
PRPF8-212ENST00000575116 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
PRPF8-212ENST00000575116 ERC1Q8IUD2 1116 aa14.75□□□□□ -0.05
PRPF8-212ENST00000575116 BRIP1Q9BX63 1249 aa14.75□□□□□ -0.05
PRPF8-212ENST00000575116 GREM2Q9H772 168 aa14.75□□□□□ -0.05
PRPF8-212ENST00000575116 CIAO1O76071 339 aa14.74□□□□□ -0.05
PRPF8-212ENST00000575116 FAM161AQ3B820 660 aa14.74□□□□□ -0.05
PRPF8-212ENST00000575116 PDGFDQ9GZP0 370 aaPredicted RBP14.74□□□□□ -0.05
PRPF8-212ENST00000575116 MTFR1LQ9H019 292 aa14.74□□□□□ -0.05
PRPF8-212ENST00000575116 ZBTB47Q9UFB7 747 aaPredicted RBP14.74□□□□□ -0.05
PRPF8-212ENST00000575116 EXOC6BQ9Y2D4 811 aa14.74□□□□□ -0.05
PRPF8-212ENST00000575116 CASZ1Q86V15 1759 aa14.74□□□□□ -0.05
PRPF8-212ENST00000575116 PDE6BP35913 854 aa14.73□□□□□ -0.05
PRPF8-212ENST00000575116 TAF7LQ5H9L4 462 aa14.73□□□□□ -0.05
PRPF8-212ENST00000575116 ANKRD45Q5TZF3 282 aa14.73□□□□□ -0.05
PRPF8-212ENST00000575116 KIF1BPQ96EK5 621 aa14.73□□□□□ -0.05
PRPF8-212ENST00000575116 CDC5LQ99459 802 aaKnown RBP14.73□□□□□ -0.05
PRPF8-212ENST00000575116 LRRCC1Q9C099 1032 aa14.73□□□□□ -0.05
PRPF8-212ENST00000575116 PDZRN3Q9UPQ7 1066 aa14.73□□□□□ -0.05
PRPF8-212ENST00000575116 PA2G4Q9UQ80 394 aaKnown RBP14.73□□□□□ -0.05
PRPF8-212ENST00000575116 EYA2O00167 538 aa14.72□□□□□ -0.05
PRPF8-212ENST00000575116 IL15P40933 162 aaPredicted RBP14.72□□□□□ -0.05
PRPF8-212ENST00000575116 CRY2Q49AN0 593 aa14.72□□□□□ -0.05
PRPF8-212ENST00000575116 CHD1LQ86WJ1 897 aa14.72□□□□□ -0.05
PRPF8-212ENST00000575116 RHPN1Q8TCX5 695 aa14.72□□□□□ -0.05
PRPF8-212ENST00000575116 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.05
PRPF8-212ENST00000575116 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
PRPF8-212ENST00000575116 DDX46Q7L014 1031 aaKnown RBP14.71□□□□□ -0.05
PRPF8-212ENST00000575116 CCDC24Q8N4L8 307 aa14.71□□□□□ -0.05
PRPF8-212ENST00000575116 KLHDC4Q8TBB5 520 aa14.71□□□□□ -0.05
PRPF8-212ENST00000575116 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
PRPF8-212ENST00000575116 POLD1P28340 1107 aa14.7□□□□□ -0.06
PRPF8-212ENST00000575116 HOXA10P31260 410 aaPredicted RBP14.7□□□□□ -0.06
PRPF8-212ENST00000575116 IGHMBP2P38935 993 aaKnown RBP14.7□□□□□ -0.06
PRPF8-212ENST00000575116 LDHAL6AQ6ZMR3 332 aa14.7□□□□□ -0.06
PRPF8-212ENST00000575116 ATG9AQ7Z3C6 839 aa14.7□□□□□ -0.06
PRPF8-212ENST00000575116 RBM17Q96I25 401 aaKnown RBP14.7□□□□□ -0.06
PRPF8-212ENST00000575116 ZNF594Q96JF6 807 aaPredicted RBP14.7□□□□□ -0.06
PRPF8-212ENST00000575116 SIL1Q9H173 461 aa14.7□□□□□ -0.06
PRPF8-212ENST00000575116 SEC31BQ9NQW1 1179 aa14.7□□□□□ -0.06
PRPF8-212ENST00000575116 SASH1O94885 1247 aa14.69□□□□□ -0.06
PRPF8-212ENST00000575116 RPS8P62241 208 aaKnown RBP14.69□□□□□ -0.06
PRPF8-212ENST00000575116 ANKRD18AQ8IVF6 992 aa14.69□□□□□ -0.06
PRPF8-212ENST00000575116 RPGRQ92834 1020 aaKnown RBP14.69□□□□□ -0.06
PRPF8-212ENST00000575116 CRAMP1Q96RY5 1269 aa14.69□□□□□ -0.06
PRPF8-212ENST00000575116 MPHOSPH8Q99549 860 aa14.69□□□□□ -0.06
PRPF8-212ENST00000575116 GPR108Q9NPR9 543 aa14.69□□□□□ -0.06
PRPF8-212ENST00000575116 BSDC1Q9NW68 430 aaPredicted RBP14.69□□□□□ -0.06
PRPF8-212ENST00000575116 RIPOR2Q9Y4F9 1068 aa14.69□□□□□ -0.06
PRPF8-212ENST00000575116 TNRC6CQ9HCJ0 1690 aaKnown RBP14.68□□□□□ -0.06
PRPF8-212ENST00000575116 APBB1O00213 710 aa14.68□□□□□ -0.06
PRPF8-212ENST00000575116 ZBTB7AO95365 584 aa14.68□□□□□ -0.06
PRPF8-212ENST00000575116 LRRC24Q50LG9 513 aa14.68□□□□□ -0.06
PRPF8-212ENST00000575116 CLASRPQ8N2M8 674 aaKnown RBP14.68□□□□□ -0.06
PRPF8-212ENST00000575116 PUS3Q9BZE2 481 aaKnown RBP14.68□□□□□ -0.06
PRPF8-212ENST00000575116 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
PRPF8-212ENST00000575116 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
PRPF8-212ENST00000575116 MROH5Q6ZUA9 1318 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 ANKRD31Q8N7Z5 1873 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 PSDA5PKW4 1024 aaPredicted RBP14.67□□□□□ -0.06
PRPF8-212ENST00000575116 BBOX1O75936 387 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 SRGNP10124 158 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 NPR1P16066 1061 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 ALDH1B1P30837 517 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 GRAPQ13588 217 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 GRAPLQ8TC17 118 aaPredicted RBP14.67□□□□□ -0.06
PRPF8-212ENST00000575116 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 CNNM1Q9NRU3 951 aa14.67□□□□□ -0.06
PRPF8-212ENST00000575116 LRP5O75197 1615 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 H0YIN7 160 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 SMARCA5O60264 1052 aaPredicted RBP14.66□□□□□ -0.06
PRPF8-212ENST00000575116 TFCP2Q12800 502 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 TMC4Q7Z404 712 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 CELF1Q92879 486 aaKnown RBP14.66□□□□□ -0.06
PRPF8-212ENST00000575116 MASTLQ96GX5 879 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 SGIP1Q9BQI5 828 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 AKAP2Q9Y2D5 859 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 C10orf71Q711Q0 1435 aa14.66□□□□□ -0.06
PRPF8-212ENST00000575116 STYK1Q6J9G0 422 aa14.65□□□□□ -0.06
PRPF8-212ENST00000575116 PDE8BO95263 885 aa14.64□□□□□ -0.07
PRPF8-212ENST00000575116 PDE4AP27815 886 aa14.64□□□□□ -0.07
PRPF8-212ENST00000575116 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 544.4 ms