RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	KDM2B	Q8NHM5	1336 aa		33.37	■■■□□ 2.93
SRRM2-222	ENST00000575009	CDHR2	Q9BYE9	1310 aa		33.37	■■■□□ 2.93
SRRM2-222	ENST00000575009	BBOX1	O75936	387 aa		33.37	■■■□□ 2.93
SRRM2-222	ENST00000575009	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.37	■■■□□ 2.93
SRRM2-222	ENST00000575009	PSMD1	Q99460	953 aa		33.37	■■■□□ 2.93
SRRM2-222	ENST00000575009	LRRC37A	A6NMS7	1700 aa		33.36	■■■□□ 2.93
SRRM2-222	ENST00000575009	COL4A5	P29400	1685 aa		33.36	■■■□□ 2.93
SRRM2-222	ENST00000575009	PDE8A	O60658	829 aa		33.36	■■■□□ 2.93
SRRM2-222	ENST00000575009	IARS	P41252	1262 aa	Known RBP	33.36	■■■□□ 2.93
SRRM2-222	ENST00000575009	C1QTNF8	P60827	252 aa		33.36	■■■□□ 2.93
SRRM2-222	ENST00000575009	GCKR	Q14397	625 aa		33.36	■■■□□ 2.93
SRRM2-222	ENST00000575009	MRPL50	Q8N5N7	158 aa	Known RBP	33.36	■■■□□ 2.93
SRRM2-222	ENST00000575009	GLTPD2	A6NH11	291 aa		33.35	■■■□□ 2.93
SRRM2-222	ENST00000575009	UBE3B	Q7Z3V4	1068 aa		33.35	■■■□□ 2.93
SRRM2-222	ENST00000575009	LINS1	Q8NG48	757 aa		33.35	■■■□□ 2.93
SRRM2-222	ENST00000575009	SSH1	Q8WYL5	1049 aa		33.35	■■■□□ 2.93
SRRM2-222	ENST00000575009	SEC31B	Q9NQW1	1179 aa		33.35	■■■□□ 2.93
SRRM2-222	ENST00000575009	SP8	Q8IXZ3	490 aa		33.34	■■■□□ 2.93
SRRM2-222	ENST00000575009	BCL2L13	Q9BXK5	485 aa		33.34	■■■□□ 2.93
SRRM2-222	ENST00000575009	RRAGC	Q9HB90	399 aa		33.34	■■■□□ 2.93
SRRM2-222	ENST00000575009		H7C1W4	665 aa		33.33	■■■□□ 2.93
SRRM2-222	ENST00000575009	HSP90B1	P14625	803 aa	Known RBP	33.32	■■■□□ 2.92
SRRM2-222	ENST00000575009	BEND3	Q5T5X7	828 aa		33.32	■■■□□ 2.92
SRRM2-222	ENST00000575009	TMX4	Q9H1E5	349 aa	Predicted RBP	33.32	■■■□□ 2.92
SRRM2-222	ENST00000575009	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.31	■■■□□ 2.92
SRRM2-222	ENST00000575009	CASP7	P55210	303 aa		33.3	■■■□□ 2.92
SRRM2-222	ENST00000575009	CTSW	P56202	376 aa		33.3	■■■□□ 2.92
SRRM2-222	ENST00000575009	CCDC152	Q4G0S7	254 aa		33.3	■■■□□ 2.92
SRRM2-222	ENST00000575009	GRIPAP1	Q4V328	841 aa		33.3	■■■□□ 2.92
SRRM2-222	ENST00000575009	DUOX1	Q9NRD9	1551 aa		33.3	■■■□□ 2.92
SRRM2-222	ENST00000575009	WDR90	Q96KV7	1748 aa		33.29	■■■□□ 2.92
SRRM2-222	ENST00000575009	SLC4A10	Q6U841	1118 aa		33.29	■■■□□ 2.92
SRRM2-222	ENST00000575009	SPEF2	Q9C093	1822 aa		33.29	■■■□□ 2.92
SRRM2-222	ENST00000575009	ZNF541	Q9H0D2	1346 aa		33.28	■■■□□ 2.92
SRRM2-222	ENST00000575009	DDN	O94850	711 aa	Predicted RBP	33.28	■■■□□ 2.92
SRRM2-222	ENST00000575009	DPP8	Q6V1X1	898 aa	Predicted RBP	33.28	■■■□□ 2.92
SRRM2-222	ENST00000575009	MPND	Q8N594	471 aa		33.28	■■■□□ 2.92
SRRM2-222	ENST00000575009	RPS8	P62241	208 aa	Known RBP	33.27	■■■□□ 2.92
SRRM2-222	ENST00000575009	DPY19L2	Q6NUT2	758 aa		33.27	■■■□□ 2.92
SRRM2-222	ENST00000575009	TTLL11	Q8NHH1	800 aa		33.27	■■■□□ 2.92
SRRM2-222	ENST00000575009	TMC4	Q7Z404	712 aa		33.26	■■■□□ 2.91
SRRM2-222	ENST00000575009	AOC3	Q16853	763 aa		33.25	■■■□□ 2.91
SRRM2-222	ENST00000575009	LARGE2	Q8N3Y3	721 aa		33.25	■■■□□ 2.91
SRRM2-222	ENST00000575009	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.25	■■■□□ 2.91
SRRM2-222	ENST00000575009	LTBP1	Q14766	1721 aa		33.25	■■■□□ 2.91
SRRM2-222	ENST00000575009	PPIP5K2	O43314	1243 aa		33.24	■■■□□ 2.91
SRRM2-222	ENST00000575009	GREM2	Q9H772	168 aa		33.24	■■■□□ 2.91
SRRM2-222	ENST00000575009	SMC4	Q9NTJ3	1288 aa		33.24	■■■□□ 2.91
SRRM2-222	ENST00000575009	POTEC	B2RU33	542 aa		33.23	■■■□□ 2.91
SRRM2-222	ENST00000575009	ALDH1L2	Q3SY69	923 aa		33.23	■■■□□ 2.91
SRRM2-222	ENST00000575009	FZD9	O00144	591 aa		33.22	■■■□□ 2.91
SRRM2-222	ENST00000575009	GPSM2	P81274	684 aa		33.22	■■■□□ 2.91
SRRM2-222	ENST00000575009	JDP2	Q8WYK2	163 aa		33.22	■■■□□ 2.91
SRRM2-222	ENST00000575009	PLA2G12B	Q9BX93	195 aa		33.22	■■■□□ 2.91
SRRM2-222	ENST00000575009	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.22	■■■□□ 2.91
SRRM2-222	ENST00000575009	TOMM70	O94826	608 aa		33.2	■■■□□ 2.91
SRRM2-222	ENST00000575009	SUPT20H	Q8NEM7	779 aa		33.2	■■■□□ 2.91
SRRM2-222	ENST00000575009	SRCIN1	Q9C0H9	1055 aa		33.2	■■■□□ 2.91
SRRM2-222	ENST00000575009	PTPRC	P08575	1304 aa		33.2	■■■□□ 2.91
SRRM2-222	ENST00000575009	CT47B1	P0C2W7	299 aa	Predicted RBP	33.19	■■■□□ 2.9
SRRM2-222	ENST00000575009	VEGFA	P15692	232 aa	Predicted RBP	33.19	■■■□□ 2.9
SRRM2-222	ENST00000575009	GRM8	O00222	908 aa		33.18	■■■□□ 2.9
SRRM2-222	ENST00000575009	ALDH1L1	O75891	902 aa		33.18	■■■□□ 2.9
SRRM2-222	ENST00000575009	ANKRD18A	Q8IVF6	992 aa		33.18	■■■□□ 2.9
SRRM2-222	ENST00000575009	NIM1K	Q8IY84	436 aa		33.18	■■■□□ 2.9
SRRM2-222	ENST00000575009	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.18	■■■□□ 2.9
SRRM2-222	ENST00000575009	RTL9	Q8NET4	1388 aa		33.18	■■■□□ 2.9
SRRM2-222	ENST00000575009	FAM161A	Q3B820	660 aa		33.17	■■■□□ 2.9
SRRM2-222	ENST00000575009	GPR101	Q96P66	508 aa	Predicted RBP	33.17	■■■□□ 2.9
SRRM2-222	ENST00000575009	POLL	Q9UGP5	575 aa		33.17	■■■□□ 2.9
SRRM2-222	ENST00000575009	FOXO4	P98177	505 aa		33.16	■■■□□ 2.9
SRRM2-222	ENST00000575009	KIAA2012	Q0VF49	1180 aa		33.16	■■■□□ 2.9
SRRM2-222	ENST00000575009	CDC5L	Q99459	802 aa	Known RBP	33.16	■■■□□ 2.9
SRRM2-222	ENST00000575009	CSF1R	P07333	972 aa		33.15	■■■□□ 2.9
SRRM2-222	ENST00000575009	EPHA10	Q5JZY3	1008 aa		33.15	■■■□□ 2.9
SRRM2-222	ENST00000575009	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.15	■■■□□ 2.9
SRRM2-222	ENST00000575009	C6orf229	H3BNL8	230 aa		33.14	■■■□□ 2.9
SRRM2-222	ENST00000575009	EIF6	P56537	245 aa	Known RBP	33.14	■■■□□ 2.9
SRRM2-222	ENST00000575009	VPS33B	Q9H267	617 aa		33.14	■■■□□ 2.9
SRRM2-222	ENST00000575009	ITGA6	P23229	1130 aa		33.13	■■■□□ 2.89
SRRM2-222	ENST00000575009	RARS	P54136	660 aa	Known RBP	33.13	■■■□□ 2.89
SRRM2-222	ENST00000575009	RBM46	Q8TBY0	533 aa	Known RBP	33.13	■■■□□ 2.89
SRRM2-222	ENST00000575009	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.13	■■■□□ 2.89
SRRM2-222	ENST00000575009	GJA3	Q9Y6H8	435 aa		33.13	■■■□□ 2.89
SRRM2-222	ENST00000575009	SCN4A	P35499	1836 aa		33.13	■■■□□ 2.89
SRRM2-222	ENST00000575009	RIMBP2	O15034	1052 aa		33.12	■■■□□ 2.89
SRRM2-222	ENST00000575009	TBC1D16	Q8TBP0	767 aa		33.12	■■■□□ 2.89
SRRM2-222	ENST00000575009	ANKIB1	Q9P2G1	1089 aa		33.12	■■■□□ 2.89
SRRM2-222	ENST00000575009	NOB1	Q9ULX3	412 aa	Known RBP	33.12	■■■□□ 2.89
SRRM2-222	ENST00000575009	NBPF7	P0C2Y1	421 aa	Predicted RBP	33.11	■■■□□ 2.89
SRRM2-222	ENST00000575009	GPC2	Q8N158	579 aa		33.1	■■■□□ 2.89
SRRM2-222	ENST00000575009	PODXL2	Q9NZ53	605 aa		33.1	■■■□□ 2.89
SRRM2-222	ENST00000575009	UFL1	O94874	794 aa		33.09	■■■□□ 2.89
SRRM2-222	ENST00000575009	WASHC4	Q2M389	1173 aa		33.09	■■■□□ 2.89
SRRM2-222	ENST00000575009	LMBR1L	Q6UX01	489 aa		33.09	■■■□□ 2.89
SRRM2-222	ENST00000575009	SUCLG2	Q96I99	432 aa		33.09	■■■□□ 2.89
SRRM2-222	ENST00000575009	BSDC1	Q9NW68	430 aa	Predicted RBP	33.09	■■■□□ 2.89
SRRM2-222	ENST00000575009	ZNRF3	Q9ULT6	936 aa		33.09	■■■□□ 2.89
SRRM2-222	ENST00000575009	CHMP3	Q9Y3E7	222 aa		33.09	■■■□□ 2.89
SRRM2-222	ENST00000575009	ZBED9	Q6R2W3	1325 aa		33.07	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms