RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 TAF6LQ9Y6J9 622 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 TCHHQ07283 1943 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 DCCP43146 1447 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 CSB-PGBD3P0DP91 1061 aa10.67□□□□□ -0.7
NCBP3-204ENST00000574911 ATF3P18847 181 aa10.67□□□□□ -0.7
NCBP3-204ENST00000574911 JARID2Q92833 1246 aaPredicted RBP10.67□□□□□ -0.7
NCBP3-204ENST00000574911 FUCA2Q9BTY2 467 aa10.67□□□□□ -0.7
NCBP3-204ENST00000574911 AFDNP55196 1824 aaKnown RBP10.67□□□□□ -0.7
NCBP3-204ENST00000574911 DTNBO60941 627 aa10.67□□□□□ -0.7
NCBP3-204ENST00000574911 PIP4K2AP48426 406 aaPredicted RBP10.67□□□□□ -0.7
NCBP3-204ENST00000574911 TOB2Q14106 344 aaPredicted RBP10.67□□□□□ -0.7
NCBP3-204ENST00000574911 EDC3Q96F86 508 aaKnown RBP10.67□□□□□ -0.7
NCBP3-204ENST00000574911 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
NCBP3-204ENST00000574911 TERF1P54274 439 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 LARP1BQ659C4 914 aaKnown RBP10.66□□□□□ -0.7
NCBP3-204ENST00000574911 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 TNS3Q68CZ2 1445 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 PARP4Q9UKK3 1724 aaKnown RBP10.66□□□□□ -0.7
NCBP3-204ENST00000574911 TMEM94Q12767 1356 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 VPS37CA5D8V6 355 aaPredicted RBP10.66□□□□□ -0.7
NCBP3-204ENST00000574911 CABP4P57796 275 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 CPDO75976 1380 aa10.66□□□□□ -0.7
NCBP3-204ENST00000574911 A0A087WZG4 1122 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 PDCP20941 246 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 CHRNA2Q15822 529 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 HAUS7Q99871 368 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 ZNF609O15014 1411 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 ATP5J2-PTCD1G3V325 749 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 PTCD1O75127 700 aaKnown RBP10.65□□□□□ -0.7
NCBP3-204ENST00000574911 KRT32Q14532 448 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 DBNDD2Q9BQY9 259 aa10.65□□□□□ -0.7
NCBP3-204ENST00000574911 H7C1W4 665 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 FOXO4P98177 505 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 CDC37L1Q7L3B6 337 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 TCEANC2Q96MN5 208 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 STRCP1A6NGW2 1772 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 KRT85P78386 507 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
NCBP3-204ENST00000574911 ELP1O95163 1332 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 SPATA31A3Q5VYP0 1347 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 NBPF26B4DH59 902 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 HCLS1P14317 486 aaPredicted RBP10.64□□□□□ -0.71
NCBP3-204ENST00000574911 MCMDC2Q4G0Z9 681 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 NBPF10Q6P3W6 841 aaKnown RBP10.64□□□□□ -0.71
NCBP3-204ENST00000574911 GIMAP6Q6P9H5 292 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 TTC6Q86TZ1 520 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 NBPF15Q8N660 670 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
NCBP3-204ENST00000574911 LMBR1LQ6UX01 489 aa10.63□□□□□ -0.71
NCBP3-204ENST00000574911 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
NCBP3-204ENST00000574911 NDUFB9Q9Y6M9 179 aa10.63□□□□□ -0.71
NCBP3-204ENST00000574911 KDM4AO75164 1064 aa10.63□□□□□ -0.71
NCBP3-204ENST00000574911 ADCY5O95622 1261 aa10.63□□□□□ -0.71
NCBP3-204ENST00000574911 CHGBP05060 677 aa10.63□□□□□ -0.71
NCBP3-204ENST00000574911 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
NCBP3-204ENST00000574911 CCDC129Q6ZRS4 1044 aa10.63□□□□□ -0.71
NCBP3-204ENST00000574911 DNAJC2Q99543 621 aaKnown RBP10.63□□□□□ -0.71
NCBP3-204ENST00000574911 USP25Q9UHP3 1055 aa10.63□□□□□ -0.71
NCBP3-204ENST00000574911 ATG9AQ7Z3C6 839 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 KBTBD3Q8NAB2 608 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 GTF3C6Q969F1 213 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 SEC62Q99442 399 aaKnown RBP10.62□□□□□ -0.71
NCBP3-204ENST00000574911 GPR108Q9NPR9 543 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 SH3TC1Q8TE82 1336 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 PALLDQ8WX93 1383 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 NUP188Q5SRE5 1749 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 TJP1Q07157 1748 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 FERMT3Q86UX7 667 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 TICAM2Q86XR7 235 aa10.62□□□□□ -0.71
NCBP3-204ENST00000574911 UBR2Q8IWV8 1755 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 RRP9O43818 475 aaKnown RBP10.61□□□□□ -0.71
NCBP3-204ENST00000574911 CYP21A2P08686 494 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 STK3Q13188 491 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 Q6ZUG5 572 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
NCBP3-204ENST00000574911 R3HCC1Q9Y3T6 440 aaKnown RBP10.61□□□□□ -0.71
NCBP3-204ENST00000574911 KCPQ6ZWJ8 1503 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 TTLL7Q6ZT98 887 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 HELLSQ9NRZ9 838 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 CWC25Q9NXE8 425 aaPredicted RBP10.61□□□□□ -0.71
NCBP3-204ENST00000574911 PAPPAQ13219 1627 aa10.61□□□□□ -0.71
NCBP3-204ENST00000574911 LIG1P18858 919 aa10.6□□□□□ -0.71
NCBP3-204ENST00000574911 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
NCBP3-204ENST00000574911 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
NCBP3-204ENST00000574911 PCDH11XQ9BZA7 1347 aa10.6□□□□□ -0.71
NCBP3-204ENST00000574911 PCDH11YQ9BZA8 1340 aa10.6□□□□□ -0.71
NCBP3-204ENST00000574911 ERVV-2B6SEH9 535 aa10.6□□□□□ -0.71
NCBP3-204ENST00000574911 JAK2O60674 1132 aa10.6□□□□□ -0.71
NCBP3-204ENST00000574911 IL15P40933 162 aaPredicted RBP10.6□□□□□ -0.71
NCBP3-204ENST00000574911 STOX1Q6ZVD7 989 aa10.6□□□□□ -0.71
NCBP3-204ENST00000574911 LEO1Q8WVC0 666 aaPredicted RBP10.6□□□□□ -0.71
NCBP3-204ENST00000574911 AP5Z1O43299 807 aa10.59□□□□□ -0.71
NCBP3-204ENST00000574911 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
NCBP3-204ENST00000574911 RESTQ13127 1097 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms