RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 GRAPLQ8TC17 118 aaPredicted RBP30.7■■■□□ 2.51
LITAF-213ENST00000574701 ARHGAP45Q92619 1136 aa30.7■■■□□ 2.51
LITAF-213ENST00000574701 YY1P25490 414 aa30.69■■■□□ 2.5
LITAF-213ENST00000574701 FRAT1Q92837 279 aaPredicted RBP30.69■■■□□ 2.5
LITAF-213ENST00000574701 CC2D2BQ6DHV5 1058 aa30.68■■■□□ 2.5
LITAF-213ENST00000574701 PLA2G12BQ9BX93 195 aa30.68■■■□□ 2.5
LITAF-213ENST00000574701 CCT4P50991 539 aaKnown RBP30.67■■■□□ 2.5
LITAF-213ENST00000574701 CASP7P55210 303 aa30.67■■■□□ 2.5
LITAF-213ENST00000574701 RASSF7Q02833 373 aa30.67■■■□□ 2.5
LITAF-213ENST00000574701 C7orf43Q8WVR3 580 aa30.67■■■□□ 2.5
LITAF-213ENST00000574701 BBOX1O75936 387 aa30.66■■■□□ 2.5
LITAF-213ENST00000574701 TAOK3Q9H2K8 898 aa30.66■■■□□ 2.5
LITAF-213ENST00000574701 TAF1P21675 1872 aa30.65■■■□□ 2.5
LITAF-213ENST00000574701 TMC4Q7Z404 712 aa30.65■■■□□ 2.5
LITAF-213ENST00000574701 RTKN2Q8IZC4 609 aa30.65■■■□□ 2.5
LITAF-213ENST00000574701 CCDC85AQ96PX6 553 aaPredicted RBP30.65■■■□□ 2.5
LITAF-213ENST00000574701 NFKBIEO00221 500 aa30.64■■■□□ 2.5
LITAF-213ENST00000574701 GRIPAP1Q4V328 841 aa30.63■■■□□ 2.49
LITAF-213ENST00000574701 ZKSCAN2Q63HK3 967 aa30.63■■■□□ 2.49
LITAF-213ENST00000574701 ATF7IPQ6VMQ6 1270 aa30.63■■■□□ 2.49
LITAF-213ENST00000574701 ATP6V0A2Q9Y487 856 aa30.63■■■□□ 2.49
LITAF-213ENST00000574701 LTBP3Q9NS15 1303 aa30.63■■■□□ 2.49
LITAF-213ENST00000574701 SBF1O95248 1867 aa30.63■■■□□ 2.49
LITAF-213ENST00000574701 UTRNP46939 3433 aa30.63■■■□□ 2.49
LITAF-213ENST00000574701 OLFM4Q6UX06 510 aa30.62■■■□□ 2.49
LITAF-213ENST00000574701 TTLL11Q8NHH1 800 aa30.62■■■□□ 2.49
LITAF-213ENST00000574701 CELF1Q92879 486 aaKnown RBP30.62■■■□□ 2.49
LITAF-213ENST00000574701 TRIM27P14373 513 aa30.61■■■□□ 2.49
LITAF-213ENST00000574701 LMNB1P20700 586 aa30.61■■■□□ 2.49
LITAF-213ENST00000574701 C9orf131Q5VYM1 1079 aa30.61■■■□□ 2.49
LITAF-213ENST00000574701 CDC5LQ99459 802 aaKnown RBP30.61■■■□□ 2.49
LITAF-213ENST00000574701 SEC31BQ9NQW1 1179 aa30.61■■■□□ 2.49
LITAF-213ENST00000574701 RNF181Q9P0P0 153 aa30.61■■■□□ 2.49
LITAF-213ENST00000574701 RTL9Q8NET4 1388 aa30.61■■■□□ 2.49
LITAF-213ENST00000574701 LRRC37AA6NMS7 1700 aa30.6■■■□□ 2.49
LITAF-213ENST00000574701 UTYO14607 1347 aa30.6■■■□□ 2.49
LITAF-213ENST00000574701 FKBP4Q02790 459 aaKnown RBP eCLIP30.6■■■□□ 2.49
LITAF-213ENST00000574701 CCDC88AQ3V6T2 1871 aa30.6■■■□□ 2.49
LITAF-213ENST00000574701 SP8Q8IXZ3 490 aa30.59■■■□□ 2.49
LITAF-213ENST00000574701 GREM2Q9H772 168 aa30.59■■■□□ 2.49
LITAF-213ENST00000574701 RPS8P62241 208 aaKnown RBP30.58■■■□□ 2.49
LITAF-213ENST00000574701 ANKRD18AQ8IVF6 992 aa30.58■■■□□ 2.49
LITAF-213ENST00000574701 CHMP3Q9Y3E7 222 aa30.58■■■□□ 2.49
LITAF-213ENST00000574701 SNED1Q8TER0 1413 aa30.57■■■□□ 2.48
LITAF-213ENST00000574701 NBPF7P0C2Y1 421 aaPredicted RBP30.57■■■□□ 2.48
LITAF-213ENST00000574701 RCAN3Q9UKA8 241 aa30.57■■■□□ 2.48
LITAF-213ENST00000574701 COL4A1P02462 1669 aa30.57■■■□□ 2.48
LITAF-213ENST00000574701 SPEF2Q9C093 1822 aa30.57■■■□□ 2.48
LITAF-213ENST00000574701 TIAM2Q8IVF5 1701 aa30.56■■■□□ 2.48
LITAF-213ENST00000574701 CSF1RP07333 972 aa30.56■■■□□ 2.48
LITAF-213ENST00000574701 FAM161AQ3B820 660 aa30.56■■■□□ 2.48
LITAF-213ENST00000574701 SUCLG2Q96I99 432 aa30.56■■■□□ 2.48
LITAF-213ENST00000574701 PSMD1Q99460 953 aa30.56■■■□□ 2.48
LITAF-213ENST00000574701 FOXO4P98177 505 aa30.55■■■□□ 2.48
LITAF-213ENST00000574701 FTSJ3Q8IY81 847 aaKnown RBP30.55■■■□□ 2.48
LITAF-213ENST00000574701 CLUAP1Q96AJ1 413 aa30.55■■■□□ 2.48
LITAF-213ENST00000574701 DICER1Q9UPY3 1922 aaKnown RBP30.55■■■□□ 2.48
LITAF-213ENST00000574701 ITGA6P23229 1130 aa30.54■■■□□ 2.48
LITAF-213ENST00000574701 INTS3Q68E01 1043 aaKnown RBP30.54■■■□□ 2.48
LITAF-213ENST00000574701 USP44Q9H0E7 712 aa30.54■■■□□ 2.48
LITAF-213ENST00000574701 ANKRD18BA2A2Z9 1011 aa30.53■■■□□ 2.48
LITAF-213ENST00000574701 IGHMBP2P38935 993 aaKnown RBP30.53■■■□□ 2.48
LITAF-213ENST00000574701 DPP8Q6V1X1 898 aaPredicted RBP30.53■■■□□ 2.48
LITAF-213ENST00000574701 SLC51AQ86UW1 340 aa30.53■■■□□ 2.48
LITAF-213ENST00000574701 MPNDQ8N594 471 aa30.53■■■□□ 2.48
LITAF-213ENST00000574701 UBTFL1P0CB47 393 aaPredicted RBP30.52■■■□□ 2.48
LITAF-213ENST00000574701 IFIT5Q13325 482 aaKnown RBP30.52■■■□□ 2.48
LITAF-213ENST00000574701 EPHA10Q5JZY3 1008 aa30.52■■■□□ 2.48
LITAF-213ENST00000574701 LMBR1LQ6UX01 489 aa30.52■■■□□ 2.48
LITAF-213ENST00000574701 SUPT20HQ8NEM7 779 aa30.52■■■□□ 2.48
LITAF-213ENST00000574701 HDAC5Q9UQL6 1122 aa30.52■■■□□ 2.48
LITAF-213ENST00000574701 TNNQ9UQP3 1299 aa30.52■■■□□ 2.48
LITAF-213ENST00000574701 ZC3H4Q9UPT8 1303 aaKnown RBP30.51■■■□□ 2.48
LITAF-213ENST00000574701 PRELPP51888 382 aa30.51■■■□□ 2.47
LITAF-213ENST00000574701 ZNF277Q9NRM2 450 aaPredicted RBP30.51■■■□□ 2.47
LITAF-213ENST00000574701 CCDC57Q2TAC2 916 aa30.5■■■□□ 2.47
LITAF-213ENST00000574701 DZIP1LQ8IYY4 767 aaKnown RBP30.5■■■□□ 2.47
LITAF-213ENST00000574701 BICC1Q9H694 974 aaKnown RBP30.5■■■□□ 2.47
LITAF-213ENST00000574701 IARSP41252 1262 aaKnown RBP30.49■■■□□ 2.47
LITAF-213ENST00000574701 MPHOSPH8Q99549 860 aa30.49■■■□□ 2.47
LITAF-213ENST00000574701 TAF7LQ5H9L4 462 aa30.48■■■□□ 2.47
LITAF-213ENST00000574701 BSDC1Q9NW68 430 aaPredicted RBP30.48■■■□□ 2.47
LITAF-213ENST00000574701 NSFL1CQ9UNZ2 370 aaKnown RBP30.48■■■□□ 2.47
LITAF-213ENST00000574701 MS4A1P11836 297 aa30.47■■■□□ 2.47
LITAF-213ENST00000574701 TMEM57Q8N5G2 664 aa30.47■■■□□ 2.47
LITAF-213ENST00000574701 KAZALD1Q96I82 304 aa30.47■■■□□ 2.47
LITAF-213ENST00000574701 GNAI3P08754 354 aa30.46■■■□□ 2.47
LITAF-213ENST00000574701 MEIS3Q99687 375 aa30.46■■■□□ 2.47
LITAF-213ENST00000574701 RTFDC1Q9BY42 306 aaPredicted RBP30.46■■■□□ 2.47
LITAF-213ENST00000574701 ANKIB1Q9P2G1 1089 aa30.46■■■□□ 2.47
LITAF-213ENST00000574701 DUOX1Q9NRD9 1551 aa30.45■■■□□ 2.47
LITAF-213ENST00000574701 GPSM2P81274 684 aa30.45■■■□□ 2.47
LITAF-213ENST00000574701 RABL6Q3YEC7 729 aaPredicted RBP30.45■■■□□ 2.47
LITAF-213ENST00000574701 LTBP1Q14766 1721 aa30.44■■■□□ 2.46
LITAF-213ENST00000574701 PPIP5K2O43314 1243 aa30.44■■■□□ 2.46
LITAF-213ENST00000574701 LARGE2Q8N3Y3 721 aa30.44■■■□□ 2.46
LITAF-213ENST00000574701 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.44■■■□□ 2.46
LITAF-213ENST00000574701 JDP2Q8WYK2 163 aa30.44■■■□□ 2.46
LITAF-213ENST00000574701 VPS33BQ9H267 617 aa30.44■■■□□ 2.46
LITAF-213ENST00000574701 XDHP47989 1333 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms