RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 FAM13AO94988 1023 aa9.11□□□□□ -0.95
CDC27-216ENST00000574304 SNRPNP63162 240 aaKnown RBP9.11□□□□□ -0.95
CDC27-216ENST00000574304 ALKBH2Q6NS38 261 aa9.11□□□□□ -0.95
CDC27-216ENST00000574304 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
CDC27-216ENST00000574304 TXNDC2Q86VQ3 553 aa9.11□□□□□ -0.95
CDC27-216ENST00000574304 EGFL7Q9UHF1 273 aa9.11□□□□□ -0.95
CDC27-216ENST00000574304 CNTNAP5Q8WYK1 1306 aa9.1□□□□□ -0.95
CDC27-216ENST00000574304 BRD1O95696 1058 aa9.1□□□□□ -0.95
CDC27-216ENST00000574304 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
CDC27-216ENST00000574304 BEND7Q8N7W2 519 aaPredicted RBP9.1□□□□□ -0.95
CDC27-216ENST00000574304 EDEM1Q92611 657 aa9.1□□□□□ -0.95
CDC27-216ENST00000574304 DNAJB12Q9NXW2 375 aaKnown RBP9.1□□□□□ -0.95
CDC27-216ENST00000574304 FNDC3AQ9Y2H6 1198 aaKnown RBP9.1□□□□□ -0.95
CDC27-216ENST00000574304 RNF225M0QZC1 329 aaPredicted RBP9.09□□□□□ -0.95
CDC27-216ENST00000574304 ICMTO60725 284 aa9.09□□□□□ -0.95
CDC27-216ENST00000574304 DHX32Q7L7V1 743 aaKnown RBP9.09□□□□□ -0.95
CDC27-216ENST00000574304 NLRP13Q86W25 1043 aa9.09□□□□□ -0.95
CDC27-216ENST00000574304 CCER1Q8TC90 406 aaPredicted RBP9.09□□□□□ -0.95
CDC27-216ENST00000574304 NUDT16Q96DE0 195 aaKnown RBP9.09□□□□□ -0.95
CDC27-216ENST00000574304 SLC6A14Q9UN76 642 aa9.09□□□□□ -0.95
CDC27-216ENST00000574304 H3BRB1 525 aa9.08□□□□□ -0.96
CDC27-216ENST00000574304 DGKGP49619 791 aa9.08□□□□□ -0.96
CDC27-216ENST00000574304 DNM1Q05193 864 aaKnown RBP9.08□□□□□ -0.96
CDC27-216ENST00000574304 AAMPQ13685 434 aa9.08□□□□□ -0.96
CDC27-216ENST00000574304 KANK3Q6NY19 840 aa9.08□□□□□ -0.96
CDC27-216ENST00000574304 TUT1Q9H6E5 874 aaKnown RBP9.08□□□□□ -0.96
CDC27-216ENST00000574304 MKL2Q9ULH7 1088 aa9.08□□□□□ -0.96
CDC27-216ENST00000574304 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
CDC27-216ENST00000574304 PHF20L1A8MW92 1017 aa9.07□□□□□ -0.96
CDC27-216ENST00000574304 PDGFAP04085 211 aa9.07□□□□□ -0.96
CDC27-216ENST00000574304 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
CDC27-216ENST00000574304 PCSK2P16519 638 aa9.07□□□□□ -0.96
CDC27-216ENST00000574304 MZF1P28698 734 aaPredicted RBP9.07□□□□□ -0.96
CDC27-216ENST00000574304 PCSK7Q16549 785 aa9.07□□□□□ -0.96
CDC27-216ENST00000574304 GLYCTKQ8IVS8 523 aa9.07□□□□□ -0.96
CDC27-216ENST00000574304 TLR7Q9NYK1 1049 aaKnown RBP9.07□□□□□ -0.96
CDC27-216ENST00000574304 MMP20O60882 483 aa9.06□□□□□ -0.96
CDC27-216ENST00000574304 IRS1P35568 1242 aa9.06□□□□□ -0.96
CDC27-216ENST00000574304 LINC00114Q6XXX2 140 aa9.06□□□□□ -0.96
CDC27-216ENST00000574304 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
CDC27-216ENST00000574304 ZBTB42B2RXF5 422 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 M0R082 166 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 ALBP02768 609 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 PSAPP07602 524 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 GPLD1P80108 840 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 KCNMA1Q12791 1236 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 TTC16Q8NEE8 873 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 ZNF417Q8TAU3 575 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 ZNF587Q96SQ5 575 aaPredicted RBP9.05□□□□□ -0.96
CDC27-216ENST00000574304 TRAIPQ9BWF2 469 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 POLIQ9UNA4 740 aa9.05□□□□□ -0.96
CDC27-216ENST00000574304 FZD6O60353 706 aa9.04□□□□□ -0.96
CDC27-216ENST00000574304 NRLP54845 237 aa9.04□□□□□ -0.96
CDC27-216ENST00000574304 MLLT1Q03111 559 aaPredicted RBP9.04□□□□□ -0.96
CDC27-216ENST00000574304 PLAURQ03405 335 aa9.04□□□□□ -0.96
CDC27-216ENST00000574304 PDE12Q6L8Q7 609 aaKnown RBP9.04□□□□□ -0.96
CDC27-216ENST00000574304 FAM35AQ86V20 835 aa9.04□□□□□ -0.96
CDC27-216ENST00000574304 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
CDC27-216ENST00000574304 GGNBP2Q9H3C7 697 aa9.04□□□□□ -0.96
CDC27-216ENST00000574304 NAGPAQ9UK23 515 aa9.04□□□□□ -0.96
CDC27-216ENST00000574304 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
CDC27-216ENST00000574304 PIK3R2O00459 728 aa9.03□□□□□ -0.96
CDC27-216ENST00000574304 GNB5O14775 395 aa9.03□□□□□ -0.96
CDC27-216ENST00000574304 SOX18P35713 384 aa9.03□□□□□ -0.96
CDC27-216ENST00000574304 C8orf34Q49A92 452 aa9.03□□□□□ -0.96
CDC27-216ENST00000574304 TTC39BQ5VTQ0 682 aaPredicted RBP9.03□□□□□ -0.96
CDC27-216ENST00000574304 C20orf204Q6ZNR8 217 aa9.03□□□□□ -0.96
CDC27-216ENST00000574304 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
CDC27-216ENST00000574304 ELP3Q9H9T3 547 aa9.03□□□□□ -0.96
CDC27-216ENST00000574304 CPB1P15086 417 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 GSK3AP49840 483 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 ECM1Q16610 540 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 PSAPL1Q6NUJ1 521 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 HFE2Q6ZVN8 426 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 OR13H1Q8NG92 308 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 NSUN5Q96P11 429 aaKnown RBP9.02□□□□□ -0.97
CDC27-216ENST00000574304 PRDM6Q9NQX0 595 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 ABI2Q9NYB9 513 aaPredicted RBP9.02□□□□□ -0.97
CDC27-216ENST00000574304 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
CDC27-216ENST00000574304 A6NHS1 94 aa9.01□□□□□ -0.97
CDC27-216ENST00000574304 HOXD8P13378 290 aaPredicted RBP9.01□□□□□ -0.97
CDC27-216ENST00000574304 USP5P45974 858 aa9.01□□□□□ -0.97
CDC27-216ENST00000574304 RASSF7Q02833 373 aa9.01□□□□□ -0.97
CDC27-216ENST00000574304 XKR5Q6UX68 686 aa9.01□□□□□ -0.97
CDC27-216ENST00000574304 NUDT8Q8WV74 236 aa9.01□□□□□ -0.97
CDC27-216ENST00000574304 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
CDC27-216ENST00000574304 LOC102724428A0A0B4J2F2 783 aa9□□□□□ -0.97
CDC27-216ENST00000574304 LILRB5O75023 590 aa9□□□□□ -0.97
CDC27-216ENST00000574304 SIK1P57059 783 aa9□□□□□ -0.97
CDC27-216ENST00000574304 ARHGAP4P98171 946 aa9□□□□□ -0.97
CDC27-216ENST00000574304 KCNA1Q09470 495 aa9□□□□□ -0.97
CDC27-216ENST00000574304 PERM1Q5SV97 790 aa9□□□□□ -0.97
CDC27-216ENST00000574304 ELMSAN1Q6PJG2 1045 aa9□□□□□ -0.97
CDC27-216ENST00000574304 SUV39H2Q9H5I1 410 aa9□□□□□ -0.97
CDC27-216ENST00000574304 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
CDC27-216ENST00000574304 SOWAHDA6NJG2 315 aa8.99□□□□□ -0.97
CDC27-216ENST00000574304 J3QW42 95 aa8.99□□□□□ -0.97
CDC27-216ENST00000574304 RGS9O75916 674 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms