RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
TRAPPC1-206ENST00000573989 CC2D2BQ6DHV5 1058 aa16.1■□□□□ 0.17
TRAPPC1-206ENST00000573989 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
TRAPPC1-206ENST00000573989 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC1-206ENST00000573989 HDAC5Q9UQL6 1122 aa16.1■□□□□ 0.17
TRAPPC1-206ENST00000573989 PPEF1O14829 653 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC1-206ENST00000573989 CTSWP56202 376 aa16.09■□□□□ 0.17
TRAPPC1-206ENST00000573989 GRAPQ13588 217 aa16.09■□□□□ 0.17
TRAPPC1-206ENST00000573989 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
TRAPPC1-206ENST00000573989 GRAPLQ8TC17 118 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC1-206ENST00000573989 RCAN3Q9UKA8 241 aa16.09■□□□□ 0.17
TRAPPC1-206ENST00000573989 ABCC4O15439 1325 aa16.09■□□□□ 0.17
TRAPPC1-206ENST00000573989 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.17
TRAPPC1-206ENST00000573989 MS4A1P11836 297 aa16.08■□□□□ 0.16
TRAPPC1-206ENST00000573989 TRIM27P14373 513 aa16.08■□□□□ 0.16
TRAPPC1-206ENST00000573989 CASP7P55210 303 aa16.08■□□□□ 0.16
TRAPPC1-206ENST00000573989 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
TRAPPC1-206ENST00000573989 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
TRAPPC1-206ENST00000573989 UTRNP46939 3433 aa16.08■□□□□ 0.16
TRAPPC1-206ENST00000573989 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC1-206ENST00000573989 TTLL11Q8NHH1 800 aa16.07■□□□□ 0.16
TRAPPC1-206ENST00000573989 CDC5LQ99459 802 aaKnown RBP16.07■□□□□ 0.16
TRAPPC1-206ENST00000573989 UTYO14607 1347 aa16.07■□□□□ 0.16
TRAPPC1-206ENST00000573989 TAF1P21675 1872 aa16.07■□□□□ 0.16
TRAPPC1-206ENST00000573989 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
TRAPPC1-206ENST00000573989 INTS3Q68E01 1043 aaKnown RBP16.06■□□□□ 0.16
TRAPPC1-206ENST00000573989 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
TRAPPC1-206ENST00000573989 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
TRAPPC1-206ENST00000573989 SBF1O95248 1867 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 RTL9Q8NET4 1388 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 NBPF7P0C2Y1 421 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 ANKRD18AQ8IVF6 992 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 SP8Q8IXZ3 490 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 CLUAP1Q96AJ1 413 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 USP44Q9H0E7 712 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
TRAPPC1-206ENST00000573989 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
TRAPPC1-206ENST00000573989 CSF1RP07333 972 aa16.04■□□□□ 0.16
TRAPPC1-206ENST00000573989 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC1-206ENST00000573989 DZIP1LQ8IYY4 767 aaKnown RBP16.04■□□□□ 0.16
TRAPPC1-206ENST00000573989 CELF1Q92879 486 aaKnown RBP16.04■□□□□ 0.16
TRAPPC1-206ENST00000573989 GREM2Q9H772 168 aa16.04■□□□□ 0.16
TRAPPC1-206ENST00000573989 ANKRD18BA2A2Z9 1011 aa16.03■□□□□ 0.16
TRAPPC1-206ENST00000573989 GNAI3P08754 354 aa16.03■□□□□ 0.16
TRAPPC1-206ENST00000573989 LMNB1P20700 586 aa16.03■□□□□ 0.16
TRAPPC1-206ENST00000573989 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
TRAPPC1-206ENST00000573989 IFIT5Q13325 482 aaKnown RBP16.03■□□□□ 0.16
TRAPPC1-206ENST00000573989 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
TRAPPC1-206ENST00000573989 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 ITGA6P23229 1130 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 YY1P25490 414 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 FOXO4P98177 505 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 CCDC57Q2TAC2 916 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 SUPT20HQ8NEM7 779 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 SUCLG2Q96I99 432 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 PSMD1Q99460 953 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 SPEF2Q9C093 1822 aa16.02■□□□□ 0.16
TRAPPC1-206ENST00000573989 NFKBIEO00221 500 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 RASSF7Q02833 373 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 FAM161AQ3B820 660 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 TAF7LQ5H9L4 462 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 DPP8Q6V1X1 898 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 MPNDQ8N594 471 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 RNF181Q9P0P0 153 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
TRAPPC1-206ENST00000573989 C9orf131Q5VYM1 1079 aa16■□□□□ 0.15
TRAPPC1-206ENST00000573989 OLFM4Q6UX06 510 aa16■□□□□ 0.15
TRAPPC1-206ENST00000573989 ITPRIPQ8IWB1 547 aa16■□□□□ 0.15
TRAPPC1-206ENST00000573989 TMEM57Q8N5G2 664 aa16■□□□□ 0.15
TRAPPC1-206ENST00000573989 BICC1Q9H694 974 aaKnown RBP16■□□□□ 0.15
TRAPPC1-206ENST00000573989 BSDC1Q9NW68 430 aaPredicted RBP16■□□□□ 0.15
TRAPPC1-206ENST00000573989 RABL6Q3YEC7 729 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC1-206ENST00000573989 EPHA10Q5JZY3 1008 aa15.99■□□□□ 0.15
TRAPPC1-206ENST00000573989 VPS33BQ9H267 617 aa15.99■□□□□ 0.15
TRAPPC1-206ENST00000573989 CHMP4BQ9H444 224 aaKnown RBP15.99■□□□□ 0.15
TRAPPC1-206ENST00000573989 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
TRAPPC1-206ENST00000573989 NSFL1CQ9UNZ2 370 aaKnown RBP15.99■□□□□ 0.15
TRAPPC1-206ENST00000573989 TNNQ9UQP3 1299 aa15.99■□□□□ 0.15
TRAPPC1-206ENST00000573989 ZC3H4Q9UPT8 1303 aaKnown RBP15.98■□□□□ 0.15
TRAPPC1-206ENST00000573989 MEIS3Q99687 375 aa15.98■□□□□ 0.15
TRAPPC1-206ENST00000573989 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
TRAPPC1-206ENST00000573989 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
TRAPPC1-206ENST00000573989 KAZALD1Q96I82 304 aa15.97■□□□□ 0.15
TRAPPC1-206ENST00000573989 RTFDC1Q9BY42 306 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC1-206ENST00000573989 ZNF277Q9NRM2 450 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC1-206ENST00000573989 LRRFIP2Q9Y608 721 aaKnown RBP15.97■□□□□ 0.15
TRAPPC1-206ENST00000573989 TIAM2Q8IVF5 1701 aa15.97■□□□□ 0.15
TRAPPC1-206ENST00000573989 XDHP47989 1333 aa15.96■□□□□ 0.15
TRAPPC1-206ENST00000573989 SNED1Q8TER0 1413 aa15.96■□□□□ 0.15
TRAPPC1-206ENST00000573989 GNAI2P04899 355 aa15.96■□□□□ 0.15
TRAPPC1-206ENST00000573989 PDE3AQ14432 1141 aa15.96■□□□□ 0.15
TRAPPC1-206ENST00000573989 EYA3Q99504 573 aa15.96■□□□□ 0.15
TRAPPC1-206ENST00000573989 ANKRD2Q9GZV1 360 aa15.96■□□□□ 0.15
TRAPPC1-206ENST00000573989 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms