RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 H3BRB1 525 aa8.76□□□□□ -1.01
CDC27-215ENST00000573550 DGKGP49619 791 aa8.76□□□□□ -1.01
CDC27-215ENST00000573550 SNRPNP63162 240 aaKnown RBP8.76□□□□□ -1.01
CDC27-215ENST00000573550 EDEM1Q92611 657 aa8.76□□□□□ -1.01
CDC27-215ENST00000573550 NUDT16Q96DE0 195 aaKnown RBP8.76□□□□□ -1.01
CDC27-215ENST00000573550 UBE2OQ9C0C9 1292 aaKnown RBP8.76□□□□□ -1.01
CDC27-215ENST00000573550 TUT1Q9H6E5 874 aaKnown RBP8.76□□□□□ -1.01
CDC27-215ENST00000573550 GNEQ9Y223 722 aaKnown RBP8.76□□□□□ -1.01
CDC27-215ENST00000573550 UBAP1LF5GYI3 381 aa8.75□□□□□ -1.01
CDC27-215ENST00000573550 PDGFAP04085 211 aa8.75□□□□□ -1.01
CDC27-215ENST00000573550 AMPD1P23109 780 aa8.75□□□□□ -1.01
CDC27-215ENST00000573550 ALKBH2Q6NS38 261 aa8.75□□□□□ -1.01
CDC27-215ENST00000573550 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
CDC27-215ENST00000573550 CCER1Q8TC90 406 aaPredicted RBP8.75□□□□□ -1.01
CDC27-215ENST00000573550 SLC6A14Q9UN76 642 aa8.75□□□□□ -1.01
CDC27-215ENST00000573550 STARD13Q9Y3M8 1113 aa8.75□□□□□ -1.01
CDC27-215ENST00000573550 FZD6O60353 706 aa8.74□□□□□ -1.01
CDC27-215ENST00000573550 ALAS2P22557 587 aa8.74□□□□□ -1.01
CDC27-215ENST00000573550 MZF1P28698 734 aaPredicted RBP8.74□□□□□ -1.01
CDC27-215ENST00000573550 MARSP56192 900 aaKnown RBP8.74□□□□□ -1.01
CDC27-215ENST00000573550 DNM1Q05193 864 aaKnown RBP8.74□□□□□ -1.01
CDC27-215ENST00000573550 NLRP13Q86W25 1043 aa8.74□□□□□ -1.01
CDC27-215ENST00000573550 IGFLR1Q9H665 355 aa8.74□□□□□ -1.01
CDC27-215ENST00000573550 DNAJB12Q9NXW2 375 aaKnown RBP8.74□□□□□ -1.01
CDC27-215ENST00000573550 MMP20O60882 483 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 TBC1D8BQ0IIM8 1120 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 KANK3Q6NY19 840 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 GLYCTKQ8IVS8 523 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 TRPM4Q8TD43 1214 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 SCARF2Q96GP6 870 aaPredicted RBP8.73□□□□□ -1.01
CDC27-215ENST00000573550 RRAGCQ9HB90 399 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 TLR7Q9NYK1 1049 aaKnown RBP8.73□□□□□ -1.01
CDC27-215ENST00000573550 NAGPAQ9UK23 515 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 POLIQ9UNA4 740 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 FNDC3AQ9Y2H6 1198 aaKnown RBP8.73□□□□□ -1.01
CDC27-215ENST00000573550 CNTNAP5Q8WYK1 1306 aa8.73□□□□□ -1.01
CDC27-215ENST00000573550 ZBTB42B2RXF5 422 aa8.72□□□□□ -1.01
CDC27-215ENST00000573550 ALBP02768 609 aa8.72□□□□□ -1.01
CDC27-215ENST00000573550 GPLD1P80108 840 aa8.72□□□□□ -1.01
CDC27-215ENST00000573550 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
CDC27-215ENST00000573550 LINC00114Q6XXX2 140 aa8.72□□□□□ -1.01
CDC27-215ENST00000573550 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
CDC27-215ENST00000573550 HOXD8P13378 290 aaPredicted RBP8.71□□□□□ -1.02
CDC27-215ENST00000573550 SOX18P35713 384 aa8.71□□□□□ -1.02
CDC27-215ENST00000573550 GSK3AP49840 483 aa8.71□□□□□ -1.02
CDC27-215ENST00000573550 NRLP54845 237 aa8.71□□□□□ -1.02
CDC27-215ENST00000573550 PDE12Q6L8Q7 609 aaKnown RBP8.71□□□□□ -1.02
CDC27-215ENST00000573550 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
CDC27-215ENST00000573550 CCDC87Q9NVE4 849 aa8.71□□□□□ -1.02
CDC27-215ENST00000573550 A6NHS1 94 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 SOWAHDA6NJG2 315 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 RNF225M0QZC1 329 aaPredicted RBP8.7□□□□□ -1.02
CDC27-215ENST00000573550 RPLP1P05386 114 aaKnown RBP8.7□□□□□ -1.02
CDC27-215ENST00000573550 KCNA1Q09470 495 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 AAMPQ13685 434 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 PODNQ7Z5L7 613 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 BEND7Q8N7W2 519 aaPredicted RBP8.7□□□□□ -1.02
CDC27-215ENST00000573550 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 MKL2Q9ULH7 1088 aa8.7□□□□□ -1.02
CDC27-215ENST00000573550 M0R082 166 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 PSAPP07602 524 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 MLLT1Q03111 559 aaPredicted RBP8.69□□□□□ -1.02
CDC27-215ENST00000573550 PLAURQ03405 335 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 PCSK7Q16549 785 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 ZNF438Q7Z4V0 828 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 GJD3Q8N144 294 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 MICALL1Q8N3F8 863 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 OR13H1Q8NG92 308 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 ZNF417Q8TAU3 575 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 ZNF587Q96SQ5 575 aaPredicted RBP8.69□□□□□ -1.02
CDC27-215ENST00000573550 ELP3Q9H9T3 547 aa8.69□□□□□ -1.02
CDC27-215ENST00000573550 ABI2Q9NYB9 513 aaPredicted RBP8.69□□□□□ -1.02
CDC27-215ENST00000573550 PCSK2P16519 638 aa8.68□□□□□ -1.02
CDC27-215ENST00000573550 USP5P45974 858 aa8.68□□□□□ -1.02
CDC27-215ENST00000573550 KCNMA1Q12791 1236 aa8.68□□□□□ -1.02
CDC27-215ENST00000573550 COL9A3Q14050 684 aaPredicted RBP8.68□□□□□ -1.02
CDC27-215ENST00000573550 C8orf34Q49A92 452 aa8.68□□□□□ -1.02
CDC27-215ENST00000573550 C8orf86Q6ZUL3 223 aa8.68□□□□□ -1.02
CDC27-215ENST00000573550 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
CDC27-215ENST00000573550 PRDM6Q9NQX0 595 aa8.68□□□□□ -1.02
CDC27-215ENST00000573550 PHF20L1A8MW92 1017 aa8.67□□□□□ -1.02
CDC27-215ENST00000573550 GNB5O14775 395 aa8.67□□□□□ -1.02
CDC27-215ENST00000573550 CPB1P15086 417 aa8.67□□□□□ -1.02
CDC27-215ENST00000573550 PSAPL1Q6NUJ1 521 aa8.67□□□□□ -1.02
CDC27-215ENST00000573550 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
CDC27-215ENST00000573550 NSUN5Q96P11 429 aaKnown RBP8.67□□□□□ -1.02
CDC27-215ENST00000573550 LPIN3Q9BQK8 851 aa8.67□□□□□ -1.02
CDC27-215ENST00000573550 IVNS1ABPQ9Y6Y0 642 aa8.67□□□□□ -1.02
CDC27-215ENST00000573550 IRS1P35568 1242 aa8.66□□□□□ -1.02
CDC27-215ENST00000573550 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
CDC27-215ENST00000573550 HFE2Q6ZVN8 426 aa8.66□□□□□ -1.02
CDC27-215ENST00000573550 FRRS1LQ9P0K9 344 aa8.66□□□□□ -1.02
CDC27-215ENST00000573550 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
CDC27-215ENST00000573550 CYP2E1P05181 493 aaPredicted RBP8.65□□□□□ -1.02
CDC27-215ENST00000573550 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
CDC27-215ENST00000573550 NID1P14543 1247 aa8.65□□□□□ -1.02
CDC27-215ENST00000573550 COL13A1Q5TAT6 717 aaPredicted RBP8.65□□□□□ -1.02
CDC27-215ENST00000573550 TTC39BQ5VTQ0 682 aaPredicted RBP8.65□□□□□ -1.02
CDC27-215ENST00000573550 NUDT8Q8WV74 236 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms